Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ss18

Gene Name Gene ID Reads Annotation
Ss18 ENSMUSG00000037013 2742 SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]







Genes with expression patterns similar to Ss18

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ss18 ENSMUSG00000037013 2742 6 1.000 1.000 1.000 1.000 1.000 1.000 SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
2. Gprasp2 ENSMUSG00000072966 2238 1.87 0.981 0.889 - - - - G protein-coupled receptor associated sorting protein 2 [Source:MGI Symbol;Acc:MGI:2442071]
3. Usp2 ENSMUSG00000032010 525 1.839 0.981 0.858 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
4. Itfg2 ENSMUSG00000001518 1233 1.747 0.881 0.866 - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
5. Sfr1 ENSMUSG00000025066 7102 1.7 0.919 0.781 - - - - SWI5 dependent recombination repair 1 [Source:MGI Symbol;Acc:MGI:1915038]
6. Bnip3l ENSMUSG00000022051 3416 1.693 0.958 0.735 - - - - BCL2/adenovirus E1B interacting protein 3-like [Source:MGI Symbol;Acc:MGI:1332659]
7. Pik3ca ENSMUSG00000027665 4207 1.662 0.922 0.740 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha [Source:MGI Symbol;Acc:MGI:1206581]
8. Polr3c ENSMUSG00000028099 1591 0.988 0.988 - - - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:1921664]
9. Heatr3 ENSMUSG00000031657 1306 0.987 0.987 - - - - - HEAT repeat containing 3 [Source:MGI Symbol;Acc:MGI:2444491]
10. Zfp820 ENSMUSG00000069743 854 0.986 0.986 - - - - - zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
11. Thoc6 ENSMUSG00000041319 1276 0.986 0.986 - - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
12. Golph3 ENSMUSG00000022200 1780 0.986 0.986 - - - - - golgi phosphoprotein 3 [Source:MGI Symbol;Acc:MGI:1913879]
13. Xaf1 ENSMUSG00000040483 1172 0.986 0.986 - - - - - XIAP associated factor 1 [Source:MGI Symbol;Acc:MGI:3772572]
14. Atf6 ENSMUSG00000026663 934 0.986 0.986 - - - - - activating transcription factor 6 [Source:MGI Symbol;Acc:MGI:1926157]
15. Impdh1 ENSMUSG00000003500 1615 0.984 0.984 - - - - - inosine monophosphate dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:96567]
16. Oser1 ENSMUSG00000035399 1702 0.984 0.984 - - - - - oxidative stress responsive serine rich 1 [Source:MGI Symbol;Acc:MGI:1913930]
17. Mastl ENSMUSG00000026779 843 0.984 0.984 - - - - - microtubule associated serine/threonine kinase-like [Source:MGI Symbol;Acc:MGI:1914371]
18. Ndufaf2 ENSMUSG00000068184 1600 0.984 0.984 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:1922847]
19. Sssca1 ENSMUSG00000079478 1411 0.983 0.983 - - - - - Sjogren syndrome/scleroderma autoantigen 1 [Source:MGI Symbol;Acc:MGI:1913482]
20. Zfp830 ENSMUSG00000046010 712 0.982 0.982 - - - - - zinc finger protein 830 [Source:MGI Symbol;Acc:MGI:1914233]
21. Trim62 ENSMUSG00000041000 867 0.982 0.982 - - - - - tripartite motif-containing 62 [Source:MGI Symbol;Acc:MGI:1914775]
22. Kremen1 ENSMUSG00000020393 424 0.982 0.982 - - - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
23. Zc3h8 ENSMUSG00000027387 363 0.982 0.982 - - - - - zinc finger CCCH type containing 8 [Source:MGI Symbol;Acc:MGI:1930128]
24. Map4k1 ENSMUSG00000037337 434 0.982 0.982 - - - - - mitogen-activated protein kinase kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346882]
25. Fahd1 ENSMUSG00000045316 533 0.982 0.982 - - - - - fumarylacetoacetate hydrolase domain containing 1 [Source:MGI Symbol;Acc:MGI:1915886]
26. Rtfdc1 1259 0.982 0.982 - - - - - replication termination factor 2 domain containing 1
27. Shisa5 ENSMUSG00000025647 1562 0.982 0.982 - - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
28. Etf1 ENSMUSG00000024360 5755 0.982 0.982 - - - - - eukaryotic translation termination factor 1 [Source:MGI Symbol;Acc:MGI:2385071]
29. Dmtf1 ENSMUSG00000042508 914 0.982 0.982 - - - - - cyclin D binding myb-like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344415]
30. Fam20b ENSMUSG00000033557 1380 0.982 0.982 - - - - - family with sequence similarity 20, member B [Source:MGI Symbol;Acc:MGI:2443990]
31. Kifc5b ENSMUSG00000024301 269 0.981 0.981 - - - - - kinesin family member C5B [Source:MGI Symbol;Acc:MGI:2137414]
32. Chrna4 ENSMUSG00000027577 941 0.981 0.981 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
33. Rsbn1 ENSMUSG00000044098 1083 0.981 0.981 - - - - - rosbin, round spermatid basic protein 1 [Source:MGI Symbol;Acc:MGI:2444993]
34. Trim71 ENSMUSG00000079259 1323 0.981 0.981 - - - - - tripartite motif-containing 71 [Source:MGI Symbol;Acc:MGI:2685973]
35. Etv4 ENSMUSG00000017724 232 0.981 0.981 - - - - - ets variant 4 [Source:MGI Symbol;Acc:MGI:99423]
36. Chtf8 ENSMUSG00000046691 938 0.981 0.981 - - - - - CTF8, chromosome transmission fidelity factor 8 [Source:MGI Symbol;Acc:MGI:2443370]
37. 2610021A01Rik ENSMUSG00000091474 463 0.981 0.981 - - - - - RIKEN cDNA 2610021A01 gene [Source:MGI Symbol;Acc:MGI:1922662]
38. Cbr1 ENSMUSG00000051483 2117 0.981 0.981 - - - - - carbonyl reductase 1 [Source:MGI Symbol;Acc:MGI:88284]
39. Pi4k2b ENSMUSG00000029186 403 0.981 0.981 - - - - - phosphatidylinositol 4-kinase type 2 beta [Source:MGI Symbol;Acc:MGI:1914323]
40. Cdc25b ENSMUSG00000027330 1004 0.981 0.981 - - - - - cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
41. Kcnmb4 ENSMUSG00000054934 1522 0.981 0.981 - - - - - potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:MGI Symbol;Acc:MGI:1913272]
42. Guk1 ENSMUSG00000020444 1427 0.981 0.981 - - - - - guanylate kinase 1 [Source:MGI Symbol;Acc:MGI:95871]
43. Nap1l5 ENSMUSG00000055430 301 0.98 0.980 - - - - - nucleosome assembly protein 1-like 5 [Source:MGI Symbol;Acc:MGI:1923555]
44. Zfp943 ENSMUSG00000053347 592 0.98 0.980 - - - - - zinc finger prtoein 943 [Source:MGI Symbol;Acc:MGI:1921920]
45. Gm20605 ENSMUSG00000029720 375 0.98 0.980 - - - - - predicted gene 20605 [Source:MGI Symbol;Acc:MGI:5306917]
46. Slc7a5 ENSMUSG00000040010 313 0.98 0.980 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 [Source:MGI Symbol;Acc:MGI:1298205]
47. Fam220a ENSMUSG00000083012 1193 0.979 0.979 - - - - - family with sequence similarity 220, member A [Source:MGI Symbol;Acc:MGI:1914488]
48. Sall1 ENSMUSG00000031665 769 0.979 0.979 - - - - - spalt like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1889585]
49. Erp29 ENSMUSG00000029616 2933 0.979 0.979 - - - - - endoplasmic reticulum protein 29 [Source:MGI Symbol;Acc:MGI:1914647]
50. Clasrp ENSMUSG00000061028 843 0.979 0.979 - - - - - CLK4-associating serine/arginine rich protein [Source:MGI Symbol;Acc:MGI:1855695]
51. Dnal1 ENSMUSG00000042523 458 0.979 0.979 - - - - - dynein, axonemal, light chain 1 [Source:MGI Symbol;Acc:MGI:1921462]
52. Prkdc ENSMUSG00000022672 742 0.979 0.979 - - - - - protein kinase, DNA activated, catalytic polypeptide [Source:MGI Symbol;Acc:MGI:104779]
53. Arrb1 ENSMUSG00000018909 902 0.979 0.979 - - - - - arrestin, beta 1 [Source:MGI Symbol;Acc:MGI:99473]
54. Jakmip2 ENSMUSG00000024502 742 0.979 0.979 - - - - - janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
55. Bcam ENSMUSG00000002980 1395 0.979 0.979 - - - - - basal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1929940]
56. Cdyl ENSMUSG00000059288 1021 0.978 0.978 - - - - - chromodomain protein, Y chromosome-like [Source:MGI Symbol;Acc:MGI:1339956]
57. Pias2 ENSMUSG00000025423 2581 0.978 0.978 - - - - - protein inhibitor of activated STAT 2 [Source:MGI Symbol;Acc:MGI:1096566]
58. Grm4 ENSMUSG00000063239 430 0.978 0.978 - - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
59. Gpcpd1 ENSMUSG00000027346 1151 0.978 0.978 - - - - - glycerophosphocholine phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:104898]
60. Fxr2 ENSMUSG00000018765 1650 0.978 0.978 - - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
61. Cul4b ENSMUSG00000031095 1334 0.977 0.977 - - - - - cullin 4B [Source:MGI Symbol;Acc:MGI:1919834]
62. Nt5c3 ENSMUSG00000029780 2379 0.977 0.977 - - - - - 5'-nucleotidase, cytosolic III [Source:MGI Symbol;Acc:MGI:1927186]
63. Ppp2r3a ENSMUSG00000043154 1840 0.977 0.977 - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:MGI Symbol;Acc:MGI:2442104]
64. Reep4 ENSMUSG00000033589 2187 0.977 0.977 - - - - - receptor accessory protein 4 [Source:MGI Symbol;Acc:MGI:1919799]
65. Nudcd1 ENSMUSG00000038736 2406 0.977 0.977 - - - - - NudC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914679]
66. Med11 ENSMUSG00000018923 1869 0.976 0.976 - - - - - mediator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1913422]
67. Gm8213 ENSMUSG00000082474 751 0.976 0.976 - - - - - predicted pseudogene 8213 [Source:MGI Symbol;Acc:MGI:3643597]
68. Nhs ENSMUSG00000059493 1580 0.976 0.976 - - - - - NHS actin remodeling regulator [Source:MGI Symbol;Acc:MGI:2684894]
69. Kif3a ENSMUSG00000018395 1688 0.976 0.976 - - - - - kinesin family member 3A [Source:MGI Symbol;Acc:MGI:107689]
70. Ap1s1 ENSMUSG00000004849 1481 0.975 0.975 - - - - - adaptor protein complex AP-1, sigma 1 [Source:MGI Symbol;Acc:MGI:1098244]
71. Plxna1 ENSMUSG00000030084 4895 0.975 0.975 - - - - - plexin A1 [Source:MGI Symbol;Acc:MGI:107685]
72. Zfp334 ENSMUSG00000017667 3163 0.975 0.975 - - - - - zinc finger protein 334 [Source:MGI Symbol;Acc:MGI:2388656]
73. Dbnl ENSMUSG00000020476 1845 0.974 0.974 - - - - - drebrin-like [Source:MGI Symbol;Acc:MGI:700006]
74. Cyc1 ENSMUSG00000022551 4794 0.973 0.973 - - - - - cytochrome c-1 [Source:MGI Symbol;Acc:MGI:1913695]
75. Lyrm5 571 0.973 0.973 - - - - - LYR motif containing 5, transcript variant X4
76. Cetn2 ENSMUSG00000031347 1649 0.973 0.973 - - - - - centrin 2 [Source:MGI Symbol;Acc:MGI:1347085]
77. Mtmr6 ENSMUSG00000021987 2727 0.971 0.971 - - - - - myotubularin related protein 6 [Source:MGI Symbol;Acc:MGI:2145637]
78. Atp5j ENSMUSG00000022890 11717 0.971 0.971 - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F [Source:MGI Symbol;Acc:MGI:107777]
79. Cops8 ENSMUSG00000034432 3968 0.97 0.970 - - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
80. Tbx2 ENSMUSG00000000093 1403 0.969 0.969 - - - - - T-box 2 [Source:MGI Symbol;Acc:MGI:98494]
81. Ap2s1 ENSMUSG00000008036 3268 0.968 0.968 - - - - - adaptor-related protein complex 2, sigma 1 subunit [Source:MGI Symbol;Acc:MGI:2141861]
82. Tacc1 ENSMUSG00000065954 1566 0.968 0.968 - - - - - transforming, acidic coiled-coil containing protein 1 [Source:MGI Symbol;Acc:MGI:2443510]
83. Smu1 ENSMUSG00000028409 4193 0.967 0.967 - - - - - smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1915546]
84. Pkib ENSMUSG00000019876 677 0.967 0.967 - - - - - protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
85. Glrx3 ENSMUSG00000031068 3221 0.967 0.967 - - - - - glutaredoxin 3 [Source:MGI Symbol;Acc:MGI:1353653]
86. Sarnp ENSMUSG00000078427 4371 0.966 0.966 - - - - - SAP domain containing ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1913368]
87. Cul5 ENSMUSG00000032030 1885 0.965 0.965 - - - - - cullin 5 [Source:MGI Symbol;Acc:MGI:1922967]
88. Timm13 ENSMUSG00000020219 4527 0.965 0.965 - - - - - translocase of inner mitochondrial membrane 13 [Source:MGI Symbol;Acc:MGI:1353432]
89. Sipa1l2 ENSMUSG00000001995 1533 0.965 0.965 - - - - - signal-induced proliferation-associated 1 like 2 [Source:MGI Symbol;Acc:MGI:2676970]
90. Pkp4 ENSMUSG00000026991 2294 0.964 0.964 - - - - - plakophilin 4 [Source:MGI Symbol;Acc:MGI:109281]
91. Calm3 ENSMUSG00000019370 13096 0.963 0.963 - - - - - calmodulin 3 [Source:MGI Symbol;Acc:MGI:103249]
92. Taldo1 ENSMUSG00000025503 9391 0.961 0.961 - - - - - transaldolase 1 [Source:MGI Symbol;Acc:MGI:1274789]
93. Arhgap1 ENSMUSG00000027247 4611 0.961 0.961 - - - - - Rho GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:2445003]
94. Birc5 ENSMUSG00000017716 6173 0.96 0.960 - - - - - baculoviral IAP repeat-containing 5 [Source:MGI Symbol;Acc:MGI:1203517]
95. Sucla2 ENSMUSG00000022110 2990 0.96 0.960 - - - - - succinate-Coenzyme A ligase, ADP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306775]
96. Pold1 ENSMUSG00000038644 2946 0.959 0.959 - - - - - polymerase (DNA directed), delta 1, catalytic subunit [Source:MGI Symbol;Acc:MGI:97741]
97. Slc4a7 ENSMUSG00000021733 3154 0.958 0.958 - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:MGI Symbol;Acc:MGI:2443878]
98. 9130401M01Rik ENSMUSG00000101892, ENSMUSG00000116094 2031 0.957 0.957 - - - - - RIKEN cDNA 9130401M01 gene [Source:MGI Symbol;Acc:MGI:1923008]
99. Ptprs ENSMUSG00000013236 3894 0.956 0.956 - - - - - protein tyrosine phosphatase, receptor type, S [Source:MGI Symbol;Acc:MGI:97815]
100. Tprgl ENSMUSG00000029030 2649 0.956 0.956 - - - - - transformation related protein 63 regulated like [Source:MGI Symbol;Acc:MGI:1915058]

There are 448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA