Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Srsf1

Gene Name Gene ID Reads Annotation
Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]







Genes with expression patterns similar to Srsf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 6 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
2. Psmd14 ENSMUSG00000026914 8998 0.892 - 0.892 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:MGI Symbol;Acc:MGI:1913284]
3. Coa3 ENSMUSG00000017188 2718 0.863 - 0.863 - - - - cytochrome C oxidase assembly factor 3 [Source:MGI Symbol;Acc:MGI:1098757]
4. Syngr2 ENSMUSG00000048277 809 0.837 - 0.837 - - - - synaptogyrin 2 [Source:MGI Symbol;Acc:MGI:1328324]
5. Epb4.1l5 Epb4.1l5 1436 0.836 - 0.836 - - - -
6. Hoxd3 ENSMUSG00000079277 3066 0.833 - 0.833 - - - - homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
7. Hibadh ENSMUSG00000029776 3064 0.829 - 0.829 - - - - 3-hydroxyisobutyrate dehydrogenase [Source:MGI Symbol;Acc:MGI:1889802]
8. Eif3i ENSMUSG00000028798 5912 0.823 - 0.823 - - - - eukaryotic translation initiation factor 3, subunit I [Source:MGI Symbol;Acc:MGI:1860763]
9. Mrpl14 ENSMUSG00000023939 4612 0.823 - 0.823 - - - - mitochondrial ribosomal protein L14 [Source:MGI Symbol;Acc:MGI:1333864]
10. Nasp ENSMUSG00000028693 20038 0.816 - 0.816 - - - - nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
11. Utp11l 5972 0.812 - 0.812 - - - - UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast), transcript variant X2
12. Wdfy3 ENSMUSG00000043940 14795 0.81 0.810 - - - - - WD repeat and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:1096875]
13. Kcnk2 ENSMUSG00000037624 670 0.803 - 0.803 - - - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
14. Pgrmc2 ENSMUSG00000049940 3815 0.797 - 0.797 - - - - progesterone receptor membrane component 2 [Source:MGI Symbol;Acc:MGI:1918054]
15. Usmg5 ENSMUSG00000071528 6916 0.79 - 0.790 - - - - upregulated during skeletal muscle growth 5 [Source:MGI Symbol;Acc:MGI:1891435]
16. Golga1 ENSMUSG00000026754 889 0.785 0.785 - - - - - golgi autoantigen, golgin subfamily a, 1 [Source:MGI Symbol;Acc:MGI:1924149]
17. Dhx15 ENSMUSG00000029169 14337 0.782 0.782 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:MGI Symbol;Acc:MGI:1099786]
18. Aasdhppt ENSMUSG00000025894 3055 0.778 0.778 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:MGI Symbol;Acc:MGI:1914868]
19. Ahnak ENSMUSG00000069833 4310 0.778 - 0.778 - - - - AHNAK nucleoprotein (desmoyokin) [Source:MGI Symbol;Acc:MGI:1316648]
20. D15Ertd621e D15Ertd621e 4078 0.773 - 0.773 - - - -
21. Vezf1 ENSMUSG00000018377, ENSMUSG00000098546 6251 0.769 0.769 - - - - - vascular endothelial zinc finger 1 [Source:MGI Symbol;Acc:MGI:1313291]
22. Gm26648 ENSMUSG00000097275 484 0.768 0.768 - - - - - predicted gene, 26648 [Source:MGI Symbol;Acc:MGI:5477142]
23. Unc5c ENSMUSG00000059921 6834 0.768 - 0.768 - - - - unc-5 netrin receptor C [Source:MGI Symbol;Acc:MGI:1095412]
24. 2310033P09Rik ENSMUSG00000020441 1138 0.767 0.767 - - - - - RIKEN cDNA 2310033P09 gene [Source:MGI Symbol;Acc:MGI:1915112]
25. Brd2 ENSMUSG00000024335 4271 0.766 - 0.766 - - - - bromodomain containing 2 [Source:MGI Symbol;Acc:MGI:99495]
26. Gpaa1 ENSMUSG00000022561 4947 0.765 0.765 - - - - - GPI anchor attachment protein 1 [Source:MGI Symbol;Acc:MGI:1202392]
27. Top1 ENSMUSG00000070544 27667 0.765 - - 0.765 - - - topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
28. Tusc1 ENSMUSG00000054000 3467 0.763 0.763 - - - - - tumor suppressor candidate 1 [Source:MGI Symbol;Acc:MGI:2684283]
29. Ppil1 ENSMUSG00000024007 2662 0.762 0.762 - - - - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:MGI Symbol;Acc:MGI:1916066]
30. G3bp1 ENSMUSG00000018583 23857 0.76 - 0.760 - - - - GTPase activating protein (SH3 domain) binding protein 1 [Source:MGI Symbol;Acc:MGI:1351465]
31. Trps1 ENSMUSG00000038679 2317 0.76 0.760 - - - - - transcriptional repressor GATA binding 1 [Source:MGI Symbol;Acc:MGI:1927616]
32. Kif21b ENSMUSG00000041642 1779 0.759 0.759 - - - - - kinesin family member 21B [Source:MGI Symbol;Acc:MGI:109234]
33. Spc24 ENSMUSG00000074476 5240 0.758 - 0.758 - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914879]
34. Ctu2 ENSMUSG00000049482 926 0.758 0.758 - - - - - cytosolic thiouridylase subunit 2 [Source:MGI Symbol;Acc:MGI:1914215]
35. Ranbp3 ENSMUSG00000002372 2738 0.757 0.757 - - - - - RAN binding protein 3 [Source:MGI Symbol;Acc:MGI:1919060]
36. Asxl2 ENSMUSG00000037486 1775 0.757 0.757 - - - - - additional sex combs like 2, transcriptional regulator [Source:MGI Symbol;Acc:MGI:1922552]
37. Abhd4 ENSMUSG00000040997 4547 0.755 - 0.755 - - - - abhydrolase domain containing 4 [Source:MGI Symbol;Acc:MGI:1915938]
38. Ebna1bp2 ENSMUSG00000028729 1566 0.754 0.754 - - - - - EBNA1 binding protein 2 [Source:MGI Symbol;Acc:MGI:1916322]
39. Cwc25 ENSMUSG00000018541 2817 0.754 0.754 - - - - - CWC25 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914730]
40. Mief1 ENSMUSG00000022412 1257 0.752 0.752 - - - - - mitochondrial elongation factor 1 [Source:MGI Symbol;Acc:MGI:2146020]
41. Ccdc148 ENSMUSG00000036641 186 0.752 0.752 - - - - - coiled-coil domain containing 148 [Source:MGI Symbol;Acc:MGI:3039583]
42. Aox3 ENSMUSG00000064294 187 0.752 0.752 - - - - - aldehyde oxidase 3 [Source:MGI Symbol;Acc:MGI:1918974]
43. Cactin ENSMUSG00000034889 727 0.752 0.752 - - - - - cactin, spliceosome C complex subunit [Source:MGI Symbol;Acc:MGI:1917562]
44. Atox1 ENSMUSG00000018585 2159 0.752 0.752 - - - - - antioxidant 1 copper chaperone [Source:MGI Symbol;Acc:MGI:1333855]
45. Tbx4 ENSMUSG00000000094 350 0.751 0.751 - - - - - T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
46. 6430548M08Rik ENSMUSG00000031824 316 0.751 0.751 - - - - - RIKEN cDNA 6430548M08 gene [Source:MGI Symbol;Acc:MGI:2443793]
47. Ankhd1 ENSMUSG00000024483 2807 0.751 - 0.751 - - - - ankyrin repeat and KH domain containing 1 [Source:MGI Symbol;Acc:MGI:1921733]
48. Galt ENSMUSG00000036073 471 0.751 0.751 - - - - - galactose-1-phosphate uridyl transferase [Source:MGI Symbol;Acc:MGI:95638]
49. Gm8186 ENSMUSG00000049124 361 0.75 0.750 - - - - - predicted gene 8186 [Source:MGI Symbol;Acc:MGI:3643110]
50. Fabp5l2 ENSMUSG00000094334 259 0.75 0.750 - - - - - fatty acid binding protein 5-like 2 [Source:MGI Symbol;Acc:MGI:3644282]
51. Npy1r ENSMUSG00000036437 641 0.75 0.750 - - - - - neuropeptide Y receptor Y1 [Source:MGI Symbol;Acc:MGI:104963]
52. Gm9027 ENSMUSG00000092029 235 0.75 0.750 - - - - - predicted gene 9027 [Source:MGI Symbol;Acc:MGI:3646681]
53. Yipf6 ENSMUSG00000047694 1128 0.75 0.750 - - - - - Yip1 domain family, member 6 [Source:MGI Symbol;Acc:MGI:1925179]
54. Zbtb7c ENSMUSG00000044646 498 0.75 0.750 - - - - - zinc finger and BTB domain containing 7C [Source:MGI Symbol;Acc:MGI:2443302]
55. Cd320 ENSMUSG00000002308 1236 0.75 0.750 - - - - - CD320 antigen [Source:MGI Symbol;Acc:MGI:1860083]
56. Lsmd1 Lsmd1 509 0.749 0.749 - - - - -
57. 9930014A18Rik ENSMUSG00000097493 298 0.749 0.749 - - - - - RIKEN cDNA 9930014A18 gene [Source:MGI Symbol;Acc:MGI:2444091]
58. B230307C23Rik ENSMUSG00000080717 231 0.749 0.749 - - - - - RIKEN cDNA B230307C23 gene [Source:MGI Symbol;Acc:MGI:3643396]
59. Taf10 ENSMUSG00000043866 2620 0.748 0.748 - - - - - TATA-box binding protein associated factor 10 [Source:MGI Symbol;Acc:MGI:1346320]
60. Gm3272 ENSMUSG00000078967 803 0.748 0.748 - - - - - predicted pseudogene 3272 [Source:MGI Symbol;Acc:MGI:3781450]
61. Mcoln3 ENSMUSG00000036853 776 0.748 0.748 - - - - - mucolipin 3 [Source:MGI Symbol;Acc:MGI:1890500]
62. Casp3 ENSMUSG00000031628 475 0.747 0.747 - - - - - caspase 3 [Source:MGI Symbol;Acc:MGI:107739]
63. Slc7a6 ENSMUSG00000031904 1103 0.746 0.746 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
64. Mettl16 ENSMUSG00000010554 1858 0.746 0.746 - - - - - methyltransferase like 16 [Source:MGI Symbol;Acc:MGI:1914743]
65. Nufip1 ENSMUSG00000022009 2226 0.746 0.746 - - - - - nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
66. Snhg1 ENSMUSG00000108414 10005 0.746 0.746 - - - - - small nucleolar RNA host gene 1 [Source:MGI Symbol;Acc:MGI:3763743]
67. Coro2b ENSMUSG00000041729 1484 0.746 0.746 - - - - - coronin, actin binding protein, 2B [Source:MGI Symbol;Acc:MGI:2444283]
68. Tpm3-rs7 ENSMUSG00000058126 1977 0.745 0.745 - - - - - tropomyosin 3, related sequence 7 [Source:MGI Symbol;Acc:MGI:99705]
69. Ppp1cc ENSMUSG00000004455 7445 0.744 0.744 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:MGI Symbol;Acc:MGI:104872]
70. Rbm3 ENSMUSG00000031167 840 0.744 0.744 - - - - - RNA binding motif (RNP1, RRM) protein 3 [Source:MGI Symbol;Acc:MGI:1099460]
71. Cir1 ENSMUSG00000041777 1088 0.744 0.744 - - - - - corepressor interacting with RBPJ, 1 [Source:MGI Symbol;Acc:MGI:1914185]
72. Cirh1a 3509 0.744 0.744 - - - - - cirrhosis, autosomal recessive 1A (human), transcript variant X1
73. Ppa2 ENSMUSG00000028013 944 0.744 0.744 - - - - - pyrophosphatase (inorganic) 2 [Source:MGI Symbol;Acc:MGI:1922026]
74. Rnf114 ENSMUSG00000006418 2216 0.744 0.744 - - - - - ring finger protein 114 [Source:MGI Symbol;Acc:MGI:1933159]
75. Rnf139 ENSMUSG00000037075 1334 0.743 0.743 - - - - - ring finger protein 139 [Source:MGI Symbol;Acc:MGI:1923091]
76. Elovl1 ENSMUSG00000006390 1606 0.743 0.743 - - - - - elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 [Source:MGI Symbol;Acc:MGI:1858959]
77. Ggps1 ENSMUSG00000021302 1070 0.743 0.743 - - - - - geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724]
78. Anxa6 ENSMUSG00000018340 3644 0.742 0.742 - - - - - annexin A6 [Source:MGI Symbol;Acc:MGI:88255]
79. Mllt6 ENSMUSG00000038437 2679 0.742 0.742 - - - - - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 [Source:MGI Symbol;Acc:MGI:1935145]
80. Nvl ENSMUSG00000026516 1431 0.742 0.742 - - - - - nuclear VCP-like [Source:MGI Symbol;Acc:MGI:1914709]
81. Msl2 ENSMUSG00000066415 3356 0.741 0.741 - - - - - MSL complex subunit 2 [Source:MGI Symbol;Acc:MGI:1925103]
82. Fhod3 ENSMUSG00000034295 930 0.741 0.741 - - - - - formin homology 2 domain containing 3 [Source:MGI Symbol;Acc:MGI:1925847]
83. Klhdc3 ENSMUSG00000063576 3875 0.741 0.741 - - - - - kelch domain containing 3 [Source:MGI Symbol;Acc:MGI:2651568]
84. Cbll1 ENSMUSG00000020659 1826 0.741 0.741 - - - - - Casitas B-lineage lymphoma-like 1 [Source:MGI Symbol;Acc:MGI:2144842]
85. Nup62 ENSMUSG00000109511 3016 0.741 0.741 - - - - - nucleoporin 62 [Source:MGI Symbol;Acc:MGI:1351500]
86. Uqcrh ENSMUSG00000063882 9620 0.74 0.740 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:MGI Symbol;Acc:MGI:1913826]
87. Shisa4 ENSMUSG00000041889 1135 0.74 0.740 - - - - - shisa family member 4 [Source:MGI Symbol;Acc:MGI:1924802]
88. Gbf1 ENSMUSG00000025224 1995 0.74 0.740 - - - - - golgi-specific brefeldin A-resistance factor 1 [Source:MGI Symbol;Acc:MGI:1861607]
89. Rab5a ENSMUSG00000017831 1042 0.74 0.740 - - - - - RAB5A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105926]
90. Abhd16a ENSMUSG00000007036 3351 0.74 0.740 - - - - - abhydrolase domain containing 16A [Source:MGI Symbol;Acc:MGI:99476]
91. Gm12504 ENSMUSG00000084274 2080 0.739 0.739 - - - - - predicted pseudogene 12504 [Source:MGI Symbol;Acc:MGI:3651567]
92. Polr2e ENSMUSG00000004667 4205 0.739 0.739 - - - - - polymerase (RNA) II (DNA directed) polypeptide E [Source:MGI Symbol;Acc:MGI:1913670]
93. Hpcal1 ENSMUSG00000071379 2570 0.738 0.738 - - - - - hippocalcin-like 1 [Source:MGI Symbol;Acc:MGI:1855689]
94. Chic2 ENSMUSG00000029229 3175 0.738 0.738 - - - - - cysteine-rich hydrophobic domain 2 [Source:MGI Symbol;Acc:MGI:1921527]
95. Cntn2 ENSMUSG00000053024 1798 0.738 0.738 - - - - - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
96. Sh3pxd2b ENSMUSG00000040711 2383 0.738 0.738 - - - - - SH3 and PX domains 2B [Source:MGI Symbol;Acc:MGI:2442062]
97. Dennd5a ENSMUSG00000035901 4738 0.738 0.738 - - - - - DENN/MADD domain containing 5A [Source:MGI Symbol;Acc:MGI:1201681]
98. Gm5879 ENSMUSG00000068262 1572 0.737 0.737 - - - - - predicted gene 5879 [Source:MGI Symbol;Acc:MGI:3647624]
99. Parp11 ENSMUSG00000037997 741 0.737 0.737 - - - - - poly (ADP-ribose) polymerase family, member 11 [Source:MGI Symbol;Acc:MGI:2141505]
100. Cpox ENSMUSG00000022742 1757 0.737 0.737 - - - - - coproporphyrinogen oxidase [Source:MGI Symbol;Acc:MGI:104841]

There are 73 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA