Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Srrm4

Gene Name Gene ID Reads Annotation
Srrm4 ENSMUSG00000063919 190 serine/arginine repetitive matrix 4 [Source:MGI Symbol;Acc:MGI:1916205]







Genes with expression patterns similar to Srrm4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srrm4 ENSMUSG00000063919 190 6 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine repetitive matrix 4 [Source:MGI Symbol;Acc:MGI:1916205]
2. Nhlh2 ENSMUSG00000048540 1310 2.444 - 0.783 - - 0.837 0.824 nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
3. 2610017I09Rik 2610017I09Rik 1595 2.204 - - - 0.724 0.755 0.725
4. Srgap3 ENSMUSG00000030257 2941 1.627 - - 0.810 - - 0.817 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
5. Pou3f2 ENSMUSG00000095139 2416 1.501 0.764 - - - - 0.737 POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
6. Lamc3 ENSMUSG00000026840 198 1.49 0.738 - 0.752 - - - laminin gamma 3 [Source:MGI Symbol;Acc:MGI:1344394]
7. Nhlh1 ENSMUSG00000051251 2017 1.489 - - 0.718 - - 0.771 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
8. Myt1 ENSMUSG00000010505 661 1.484 - - - - 0.701 0.783 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
9. Rnf165 ENSMUSG00000025427 2394 1.45 - - - - 0.706 0.744 ring finger protein 165 [Source:MGI Symbol;Acc:MGI:2444521]
10. Phyhipl ENSMUSG00000037747 636 1.444 - - 0.722 - 0.722 - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
11. Pcdh8 ENSMUSG00000036422 452 1.413 - - 0.701 - 0.712 - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
12. Ppp1r14a ENSMUSG00000037166 745 0.878 - - 0.878 - - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
13. Srrm3 ENSMUSG00000039860 113 0.843 - - 0.843 - - - serine/arginine repetitive matrix 3 [Source:MGI Symbol;Acc:MGI:1920309]
14. Bhlhe23 ENSMUSG00000045493 61 0.821 - - 0.821 - - - basic helix-loop-helix family, member e23 [Source:MGI Symbol;Acc:MGI:2153710]
15. Insm1 ENSMUSG00000068154 480 0.819 - - 0.819 - - - insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
16. Rhbdl3 ENSMUSG00000017692 783 0.811 - - - - - 0.811 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
17. Jam2 ENSMUSG00000053062 1020 0.807 0.807 - - - - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
18. Hes5 ENSMUSG00000048001 1640 0.802 - - - - - 0.802 hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
19. Insc ENSMUSG00000048782 72 0.793 - - 0.793 - - - INSC spindle orientation adaptor protein [Source:MGI Symbol;Acc:MGI:1917942]
20. Cercam ENSMUSG00000039787 610 0.793 0.793 - - - - - cerebral endothelial cell adhesion molecule [Source:MGI Symbol;Acc:MGI:2139134]
21. Brsk2 ENSMUSG00000053046 398 0.788 - - - - - 0.788 BR serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1923020]
22. Elavl3 ENSMUSG00000003410 2830 0.785 - - 0.785 - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
23. Nova2 ENSMUSG00000030411 400 0.782 0.782 - - - - - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
24. Trp53i11 ENSMUSG00000068735 15944 0.781 - - 0.781 - - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
25. Ptprn2 ENSMUSG00000056553 489 0.779 - - - - 0.779 - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:MGI Symbol;Acc:MGI:107418]
26. Heyl ENSMUSG00000032744 993 0.777 - - 0.777 - - - hairy/enhancer-of-split related with YRPW motif-like [Source:MGI Symbol;Acc:MGI:1860511]
27. Coro1c ENSMUSG00000004530 8028 0.776 - - 0.776 - - - coronin, actin binding protein 1C [Source:MGI Symbol;Acc:MGI:1345964]
28. Sox10 ENSMUSG00000033006 4908 0.774 - - 0.774 - - - SRY (sex determining region Y)-box 10 [Source:MGI Symbol;Acc:MGI:98358]
29. 0610040B09Rik 0610040B09Rik 333 0.774 - - 0.774 - - -
30. RP24-312G4.2 RP24-312G4.2 350 0.771 - - 0.771 - - -
31. Nckap5 ENSMUSG00000049690 542 0.771 0.771 - - - - - NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
32. Fam210b ENSMUSG00000027495 1150 0.769 - - 0.769 - - - family with sequence similarity 210, member B [Source:MGI Symbol;Acc:MGI:1914267]
33. Shox2 ENSMUSG00000027833 200 0.768 - - 0.768 - - - short stature homeobox 2 [Source:MGI Symbol;Acc:MGI:1201673]
34. Hoxb9 ENSMUSG00000020875 2764 0.767 0.767 - - - - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
35. Cotl1 ENSMUSG00000031827 4560 0.765 - - 0.765 - - - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
36. Chrna4 ENSMUSG00000027577 941 0.765 - - - - - 0.765 cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
37. Grm2 ENSMUSG00000023192 147 0.764 - - 0.764 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
38. Adcyap1r1 ENSMUSG00000029778 817 0.762 0.762 - - - - - adenylate cyclase activating polypeptide 1 receptor 1 [Source:MGI Symbol;Acc:MGI:108449]
39. Gm10349 Gm10349 8 0.761 0.761 - - - - -
40. Svop ENSMUSG00000042078 62 0.76 - - 0.760 - - - SV2 related protein [Source:MGI Symbol;Acc:MGI:1915916]
41. Gdap1 ENSMUSG00000025777 166 0.759 - - 0.759 - - - ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
42. Zbtb18 ENSMUSG00000063659 1287 0.758 0.758 - - - - - zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]
43. Actl6b ENSMUSG00000029712 203 0.758 - 0.758 - - - - actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
44. Slc10a4 ENSMUSG00000029219 550 0.754 - 0.754 - - - - solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
45. Ckb ENSMUSG00000001270 8443 0.753 0.753 - - - - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
46. Gm3764 ENSMUSG00000097156 474 0.753 - - - - 0.753 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
47. Fmn2 ENSMUSG00000028354 577 0.753 - - - - 0.753 - formin 2 [Source:MGI Symbol;Acc:MGI:1859252]
48. Tmem163 ENSMUSG00000026347 282 0.751 - - - - - 0.751 transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
49. Unc79 ENSMUSG00000021198 73 0.749 - 0.749 - - - - unc-79 homolog [Source:MGI Symbol;Acc:MGI:2684729]
50. Sparcl1 ENSMUSG00000029309 3105 0.748 - - 0.748 - - - SPARC-like 1 [Source:MGI Symbol;Acc:MGI:108110]
51. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 0.742 - - - - - 0.742 cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
52. Apba2 ENSMUSG00000030519 840 0.742 - - - - 0.742 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
53. Dnaic2 ENSMUSG00000034706 34 0.741 - - 0.741 - - - dynein, axonemal, intermediate chain 2 [Source:MGI Symbol;Acc:MGI:2685574]
54. Zic4 ENSMUSG00000036972 1968 0.741 - - 0.741 - - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
55. Sox2 ENSMUSG00000074637 8409 0.74 - - - - 0.740 - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
56. Scg2 ENSMUSG00000050711 91 0.738 - 0.738 - - - - secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
57. Isl2 ENSMUSG00000032318 488 0.737 - 0.737 - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
58. Lhx3 ENSMUSG00000026934 117 0.737 - 0.737 - - - - LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
59. Gpr37 ENSMUSG00000039904 169 0.737 - - 0.737 - - - G protein-coupled receptor 37 [Source:MGI Symbol;Acc:MGI:1313297]
60. Npr2 ENSMUSG00000028469 946 0.736 - - 0.736 - - - natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
61. RP24-113D21.1 RP24-113D21.1 685 0.736 - - - - 0.736 -
62. Cdk5r2 ENSMUSG00000090071 67 0.735 - - - - 0.735 - cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]
63. Kif21a ENSMUSG00000022629 1223 0.735 - - - - 0.735 - kinesin family member 21A [Source:MGI Symbol;Acc:MGI:109188]
64. Lzts1 ENSMUSG00000036306 472 0.735 0.735 - - - - - leucine zipper, putative tumor suppressor 1 [Source:MGI Symbol;Acc:MGI:2684762]
65. Lhfpl4 ENSMUSG00000042873 331 0.734 - - - - - 0.734 lipoma HMGIC fusion partner-like protein 4 [Source:MGI Symbol;Acc:MGI:3057108]
66. Soga3 ENSMUSG00000038916 3972 0.733 - - - - 0.733 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
67. Slc1a2 ENSMUSG00000005089 830 0.733 0.733 - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
68. Eya2 ENSMUSG00000017897 263 0.731 - - 0.731 - - - EYA transcriptional coactivator and phosphatase 2 [Source:MGI Symbol;Acc:MGI:109341]
69. Olig2 ENSMUSG00000039830 329 0.73 - 0.730 - - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
70. Chgb ENSMUSG00000027350 341 0.73 - 0.730 - - - - chromogranin B [Source:MGI Symbol;Acc:MGI:88395]
71. Ago1 ENSMUSG00000041530 7703 0.729 - - - - - 0.729 argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
72. Trim2 ENSMUSG00000027993 3587 0.728 - - - - - 0.728 tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
73. Syp ENSMUSG00000031144 41 0.726 0.726 - - - - - synaptophysin [Source:MGI Symbol;Acc:MGI:98467]
74. Crmp1 ENSMUSG00000029121 3165 0.726 - 0.726 - - - - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
75. Dll1 ENSMUSG00000014773 633 0.726 - - - - 0.726 - delta like canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:104659]
76. Syn1 ENSMUSG00000037217 289 0.725 - 0.725 - - - - synapsin I [Source:MGI Symbol;Acc:MGI:98460]
77. Cplx1 ENSMUSG00000033615 94 0.725 - - 0.725 - - - complexin 1 [Source:MGI Symbol;Acc:MGI:104727]
78. Slc35f1 ENSMUSG00000038602 342 0.724 0.724 - - - - - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
79. Gprin1 ENSMUSG00000069227 1013 0.723 - 0.723 - - - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
80. Tagln3 ENSMUSG00000022658 6054 0.721 - - - - - 0.721 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
81. Rundc3a ENSMUSG00000006575 421 0.72 - - - - 0.720 - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
82. Gm27032 ENSMUSG00000098051 80 0.72 0.720 - - - - - predicted gene, 27032 [Source:MGI Symbol;Acc:MGI:5504147]
83. Dcc ENSMUSG00000060534 107 0.719 0.719 - - - - - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
84. Olig1 ENSMUSG00000046160 18 0.718 - 0.718 - - - - oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]
85. Crtac1 ENSMUSG00000042401 228 0.715 - 0.715 - - - - cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]
86. Tubb2b ENSMUSG00000045136 41060 0.713 - - - - - 0.713 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
87. B020004J07Rik ENSMUSG00000035201 23 0.713 - 0.713 - - - - RIKEN cDNA B020004J07 gene [Source:MGI Symbol;Acc:MGI:3588238]
88. Apc2 ENSMUSG00000020135 328 0.713 - - - - - 0.713 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
89. Bai3 Bai3 552 0.713 - - 0.713 - - -
90. Dll3 ENSMUSG00000003436 1086 0.713 - - - 0.713 - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
91. Tmsb4x ENSMUSG00000049775 61014 0.713 - - - - - 0.713 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
92. Kif6 ENSMUSG00000023999 28 0.712 0.712 - - - - - kinesin family member 6 [Source:MGI Symbol;Acc:MGI:1098238]
93. Igfbpl1 ENSMUSG00000035551 856 0.712 - - - - - 0.712 insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
94. Enc1 ENSMUSG00000041773 2185 0.711 - - 0.711 - - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
95. Nova1 ENSMUSG00000021047 658 0.71 0.710 - - - - - neuro-oncological ventral antigen 1 [Source:MGI Symbol;Acc:MGI:104297]
96. Scrt1 ENSMUSG00000048385 155 0.707 - - - - - 0.707 scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
97. Wscd2 ENSMUSG00000063430 434 0.706 - - 0.706 - - - WSC domain containing 2 [Source:MGI Symbol;Acc:MGI:2445030]
98. Nes ENSMUSG00000004891 8017 0.706 - - 0.706 - - - nestin [Source:MGI Symbol;Acc:MGI:101784]
99. Nefm ENSMUSG00000022054 2534 0.706 - 0.706 - - - - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
100. Tlx3 ENSMUSG00000040610 161 0.705 - - 0.705 - - - T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]

There are 6 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA