Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Srrm1

Gene Name Gene ID Reads Annotation
Srrm1 ENSMUSG00000028809 4875 serine/arginine repetitive matrix 1 [Source:MGI Symbol;Acc:MGI:1858303]







Genes with expression patterns similar to Srrm1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srrm1 ENSMUSG00000028809 4875 6 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine repetitive matrix 1 [Source:MGI Symbol;Acc:MGI:1858303]
2. Crybg3 ENSMUSG00000022723 117 0.852 - - - - 0.852 - beta-gamma crystallin domain containing 3 [Source:MGI Symbol;Acc:MGI:2676311]
3. 5730455P16Rik ENSMUSG00000057181 986 0.85 - - - - 0.850 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
4. Crem ENSMUSG00000063889 328 0.847 - - - - 0.847 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
5. 2610307P16Rik ENSMUSG00000085936 253 0.846 - - - - 0.846 - RIKEN cDNA 2610307P16 gene [Source:MGI Symbol;Acc:MGI:1919768]
6. Surf2 ENSMUSG00000014873 372 0.846 - - - - 0.846 - surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
7. Nuak2 ENSMUSG00000009772 426 0.845 - - - - 0.845 - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
8. Dmtn ENSMUSG00000022099 423 0.844 - - - - 0.844 - dematin actin binding protein [Source:MGI Symbol;Acc:MGI:99670]
9. Apitd1 412 0.842 - - - - 0.842 - apoptosis-inducing, TAF9-like domain 1
10. Frat2 ENSMUSG00000047604 478 0.84 - - - - 0.840 - frequently rearranged in advanced T cell lymphomas 2 [Source:MGI Symbol;Acc:MGI:2673967]
11. Lpin1 ENSMUSG00000020593 407 0.84 - - - - 0.840 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
12. BC026585 1005 0.839 - - - - 0.839 - cDNA sequence BC026585, transcript variant X1
13. Snph ENSMUSG00000027457 95 0.836 - - - - 0.836 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
14. Atr ENSMUSG00000032409 420 0.836 - - - - 0.836 - ataxia telangiectasia and Rad3 related [Source:MGI Symbol;Acc:MGI:108028]
15. Srxn1 ENSMUSG00000032802 244 0.834 - - - - 0.834 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
16. Kcnab2 ENSMUSG00000028931 291 0.834 - - - - 0.834 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
17. Med28 ENSMUSG00000015804 2949 0.831 - - - - 0.831 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
18. Ifi30 ENSMUSG00000031838, ENSMUSG00000110777 708 0.831 - - - - 0.831 - interferon gamma inducible protein 30 [Source:NCBI gene;Acc:65972]
19. Mnt ENSMUSG00000000282 715 0.831 - - - - 0.831 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
20. Pla2g3 ENSMUSG00000034579 79 0.831 - - - - 0.831 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
21. Ccdc177 ENSMUSG00000062961 159 0.831 - - - - 0.831 - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
22. Grid2 ENSMUSG00000071424 180 0.831 - - - - 0.831 - glutamate receptor, ionotropic, delta 2 [Source:MGI Symbol;Acc:MGI:95813]
23. Pdcd4 ENSMUSG00000024975 1336 0.83 - - - - 0.830 - programmed cell death 4 [Source:MGI Symbol;Acc:MGI:107490]
24. Wnk4 ENSMUSG00000035112 162 0.83 - - - - 0.830 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
25. Gm14813 ENSMUSG00000082549 69 0.83 - - - - 0.830 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
26. Tbc1d2 ENSMUSG00000039813 51 0.83 - - - - 0.830 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
27. Tfpt ENSMUSG00000006335 157 0.83 - - - - 0.830 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
28. Pacsin1 ENSMUSG00000040276 185 0.83 - - - - 0.830 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
29. Gm5644 ENSMUSG00000100104 76 0.829 - - - - 0.829 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
30. Fkbp11 ENSMUSG00000003355 578 0.829 - - - - 0.829 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
31. Zc3h6 ENSMUSG00000042851 135 0.829 - - - - 0.829 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
32. Tmem25 ENSMUSG00000002032 100 0.829 - - - - 0.829 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
33. Gm9083 ENSMUSG00000083033 141 0.829 - - - - 0.829 - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
34. Obfc1 1133 0.829 - - - - 0.829 - oligonucleotide/oligosaccharide-binding fold containing 1, transcript variant X1
35. Ccdc126 ENSMUSG00000050786 121 0.829 - - - - 0.829 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
36. E030013I19Rik ENSMUSG00000086843 118 0.829 - - - - 0.829 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
37. Plxnc1 ENSMUSG00000074785 183 0.829 - - - - 0.829 - plexin C1 [Source:MGI Symbol;Acc:MGI:1890127]
38. Vmn1r132 ENSMUSG00000074322 39 0.828 - - - - 0.828 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
39. Ampd3 ENSMUSG00000005686 113 0.828 - - - - 0.828 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
40. H2-D1 ENSMUSG00000073411 344 0.828 - - - - 0.828 - histocompatibility 2, D region locus 1 [Source:MGI Symbol;Acc:MGI:95896]
41. Cmpk2 ENSMUSG00000020638 304 0.828 - - - - 0.828 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:99830]
42. Pnrc2 ENSMUSG00000028675 6182 0.828 0.828 - - - - - proline-rich nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:106512]
43. Fbxo8 ENSMUSG00000038206 1079 0.827 - - - - 0.827 - F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
44. Gzmc ENSMUSG00000079186 38 0.827 - - - - 0.827 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
45. Gm11989 ENSMUSG00000083553 73 0.827 - - - - 0.827 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
46. Kctd10 ENSMUSG00000001098 136 0.826 - - - - 0.826 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
47. Pmel ENSMUSG00000025359 54 0.826 - - - - 0.826 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
48. Acsl5 ENSMUSG00000024981 381 0.826 - - - - 0.826 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
49. Jazf1 ENSMUSG00000063568 47 0.825 - - - - 0.825 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
50. Rhag ENSMUSG00000023926 119 0.824 - - - - 0.824 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
51. Ttc37 ENSMUSG00000033991 159 0.824 - - - - 0.824 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
52. 1700094D03Rik 567 0.824 - - - - 0.824 - RIKEN cDNA 1700094D03 gene
53. Wars ENSMUSG00000021266 1410 0.824 - - - - 0.824 - tryptophanyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:104630]
54. Bok ENSMUSG00000026278 242 0.823 - - - - 0.823 - BCL2-related ovarian killer [Source:MGI Symbol;Acc:MGI:1858494]
55. Snord47 ENSMUSG00000064968 286 0.823 - - - - 0.823 - small nucleolar RNA, C/D box 47 [Source:MGI Symbol;Acc:MGI:3819537]
56. Lmbr1 ENSMUSG00000010721 572 0.822 - - - - 0.822 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
57. Klhdc2 ENSMUSG00000020978 12529 0.822 - - - - 0.822 - kelch domain containing 2 [Source:MGI Symbol;Acc:MGI:1916804]
58. Coq4 ENSMUSG00000026798 769 0.822 - - - - 0.822 - coenzyme Q4 [Source:MGI Symbol;Acc:MGI:1098826]
59. Zfp81 ENSMUSG00000003929 1819 0.822 - - - - 0.822 - zinc finger protein 81 [Source:MGI Symbol;Acc:MGI:1890752]
60. Gm26624 ENSMUSG00000097122 753 0.821 - - - - 0.821 - predicted gene, 26624 [Source:MGI Symbol;Acc:MGI:5477118]
61. Gm23913 Gm23913 84 0.82 - - - - 0.820 -
62. Ldb3 ENSMUSG00000021798 170 0.82 - - - - 0.820 - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
63. Piga ENSMUSG00000031381 638 0.82 - - - - 0.820 - phosphatidylinositol glycan anchor biosynthesis, class A [Source:MGI Symbol;Acc:MGI:99461]
64. Krt20 ENSMUSG00000035775 230 0.819 - - - - 0.819 - keratin 20 [Source:MGI Symbol;Acc:MGI:1914059]
65. Hivep3 ENSMUSG00000028634 196 0.819 - - - - 0.819 - human immunodeficiency virus type I enhancer binding protein 3 [Source:MGI Symbol;Acc:MGI:106589]
66. Sec14l2 ENSMUSG00000003585 109 0.819 - - - - 0.819 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
67. Sptb ENSMUSG00000021061 824 0.819 - - - - 0.819 - spectrin beta, erythrocytic [Source:MGI Symbol;Acc:MGI:98387]
68. Rnaseh2a ENSMUSG00000052926 1911 0.817 - - - - 0.817 - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
69. Gm13341 ENSMUSG00000083863 5904 0.816 - - - - 0.816 - predicted gene 13341 [Source:MGI Symbol;Acc:MGI:3650228]
70. Cdk10 ENSMUSG00000033862 738 0.816 - - - - 0.816 - cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
71. Rfwd3 ENSMUSG00000033596 648 0.816 - - - - 0.816 - ring finger and WD repeat domain 3 [Source:MGI Symbol;Acc:MGI:2384584]
72. Rab1b ENSMUSG00000024870 4174 0.815 - - - - 0.815 - RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]
73. Mapk4 ENSMUSG00000024558 228 0.815 - - - - 0.815 - mitogen-activated protein kinase 4 [Source:MGI Symbol;Acc:MGI:2444559]
74. St7 ENSMUSG00000029534 1415 0.814 - - - - 0.814 - suppression of tumorigenicity 7 [Source:MGI Symbol;Acc:MGI:1927450]
75. 4930480K23Rik ENSMUSG00000097284 105 0.814 - - - - 0.814 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
76. Acss2 ENSMUSG00000027605 588 0.814 - - - - 0.814 - acyl-CoA synthetase short-chain family member 2 [Source:MGI Symbol;Acc:MGI:1890410]
77. Tm9sf4 ENSMUSG00000068040 706 0.813 - - - - 0.813 - transmembrane 9 superfamily protein member 4 [Source:MGI Symbol;Acc:MGI:2139220]
78. Txnrd3 ENSMUSG00000000811 405 0.812 - - - - 0.812 - thioredoxin reductase 3 [Source:MGI Symbol;Acc:MGI:2386711]
79. Ptges2 ENSMUSG00000026820 419 0.812 - - - - 0.812 - prostaglandin E synthase 2 [Source:MGI Symbol;Acc:MGI:1917592]
80. Sgsm3 ENSMUSG00000042303 608 0.812 - - - - 0.812 - small G protein signaling modulator 3 [Source:MGI Symbol;Acc:MGI:1916329]
81. Fggy ENSMUSG00000028573 140 0.812 - - - - 0.812 - FGGY carbohydrate kinase domain containing [Source:MGI Symbol;Acc:MGI:1922828]
82. Mbd1 ENSMUSG00000024561 619 0.811 - - - - 0.811 - methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
83. Klc2 ENSMUSG00000024862 582 0.81 - - - - 0.810 - kinesin light chain 2 [Source:MGI Symbol;Acc:MGI:107953]
84. Ggps1 ENSMUSG00000021302 1070 0.809 - - - - 0.809 - geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724]
85. Fgd5 ENSMUSG00000034037 499 0.809 - - - - 0.809 - FYVE, RhoGEF and PH domain containing 5 [Source:MGI Symbol;Acc:MGI:2443369]
86. Fam50a ENSMUSG00000001962 2244 0.807 - - - - 0.807 - family with sequence similarity 50, member A [Source:MGI Symbol;Acc:MGI:1351626]
87. Loh12cr1 Loh12cr1 321 0.806 - - - - 0.806 -
88. Fnip2 ENSMUSG00000061175 532 0.806 - - - - 0.806 - folliculin interacting protein 2 [Source:MGI Symbol;Acc:MGI:2683054]
89. Eps15 ENSMUSG00000028552 3437 0.806 - - - - 0.806 - epidermal growth factor receptor pathway substrate 15 [Source:MGI Symbol;Acc:MGI:104583]
90. Xcr1 ENSMUSG00000060509 282 0.805 - - - - 0.805 - chemokine (C motif) receptor 1 [Source:MGI Symbol;Acc:MGI:1346338]
91. Ttc27 ENSMUSG00000024078 781 0.804 - - - - 0.804 - tetratricopeptide repeat domain 27 [Source:MGI Symbol;Acc:MGI:1921446]
92. Ddx47 ENSMUSG00000030204 1576 0.804 - - - - 0.804 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]
93. Katnb1 ENSMUSG00000031787 333 0.804 - - - - 0.804 - katanin p80 (WD40-containing) subunit B 1 [Source:MGI Symbol;Acc:MGI:1921437]
94. Ppm1f ENSMUSG00000026181 531 0.804 - - - - 0.804 - protein phosphatase 1F (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:1918464]
95. Cpsf3 ENSMUSG00000054309 1861 0.803 - - - - 0.803 - cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328]
96. Mul1 ENSMUSG00000041241 430 0.802 - - - - 0.802 - mitochondrial ubiquitin ligase activator of NFKB 1 [Source:MGI Symbol;Acc:MGI:1915600]
97. Slc22a23 ENSMUSG00000038267 407 0.802 - - - - 0.802 - solute carrier family 22, member 23 [Source:MGI Symbol;Acc:MGI:1920352]
98. Xpc ENSMUSG00000030094 530 0.801 - - - - 0.801 - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
99. Nova2 ENSMUSG00000030411 400 0.8 - - - - 0.800 - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
100. Ddt ENSMUSG00000001666 1681 0.8 - - - - 0.800 - D-dopachrome tautomerase [Source:MGI Symbol;Acc:MGI:1298381]

There are 222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA