Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Srr

Gene Name Gene ID Reads Annotation
Srr ENSMUSG00000001323 373 serine racemase [Source:MGI Symbol;Acc:MGI:1351636]







Genes with expression patterns similar to Srr

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srr ENSMUSG00000001323 373 6 1.000 1.000 1.000 1.000 1.000 1.000 serine racemase [Source:MGI Symbol;Acc:MGI:1351636]
2. Tufm ENSMUSG00000073838 265 1.802 0.872 - - - - 0.930 Tu translation elongation factor, mitochondrial [Source:MGI Symbol;Acc:MGI:1923686]
3. Irf9 ENSMUSG00000002325 582 1.77 0.811 - - - - 0.959 interferon regulatory factor 9 [Source:MGI Symbol;Acc:MGI:107587]
4. Rasl12 ENSMUSG00000041696 228 1.721 0.912 - 0.809 - - - RAS-like, family 12 [Source:MGI Symbol;Acc:MGI:1918034]
5. Dyrk2 ENSMUSG00000028630 251 1.711 - - 0.770 - - 0.941 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:MGI Symbol;Acc:MGI:1330301]
6. Ate1 ENSMUSG00000030850 1007 1.681 0.813 - - - - 0.868 arginyltransferase 1 [Source:MGI Symbol;Acc:MGI:1333870]
7. Micall1 ENSMUSG00000033039 964 1.645 0.822 - - - - 0.823 microtubule associated monooxygenase, calponin and LIM domain containing -like 1 [Source:MGI Symbol;Acc:MGI:105870]
8. Aamdc ENSMUSG00000035642 847 1.643 0.816 - - - - 0.827 adipogenesis associated Mth938 domain containing [Source:MGI Symbol;Acc:MGI:1913523]
9. Zfp398 ENSMUSG00000062519 315 1.616 0.870 - 0.746 - - - zinc finger protein 398 [Source:MGI Symbol;Acc:MGI:1917856]
10. Gm11625 ENSMUSG00000080839 989 1.595 0.761 - - - - 0.834 predicted gene 11625 [Source:MGI Symbol;Acc:MGI:3650862]
11. Rela ENSMUSG00000024927 650 1.595 0.778 - - - - 0.817 v-rel reticuloendotheliosis viral oncogene homolog A (avian) [Source:MGI Symbol;Acc:MGI:103290]
12. Psd2 ENSMUSG00000024347 374 1.587 - - 0.702 - - 0.885 pleckstrin and Sec7 domain containing 2 [Source:MGI Symbol;Acc:MGI:1921252]
13. Dnlz ENSMUSG00000075467 1790 1.572 0.856 - 0.716 - - - DNL-type zinc finger [Source:MGI Symbol;Acc:MGI:106559]
14. Sord ENSMUSG00000027227 1821 1.572 0.790 - - - - 0.782 sorbitol dehydrogenase [Source:MGI Symbol;Acc:MGI:98266]
15. Mtr ENSMUSG00000021311 886 1.548 0.745 - - - - 0.803 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:MGI Symbol;Acc:MGI:894292]
16. Gm21750 ENSMUSG00000096463 1057 1.519 0.736 - - - - 0.783 predicted gene, 21750 [Source:MGI Symbol;Acc:MGI:5433914]
17. Pkp3 ENSMUSG00000054065 110 0.957 - - - - - 0.957 plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
18. Galnt14 ENSMUSG00000024064 186 0.956 - - - - - 0.956 polypeptide N-acetylgalactosaminyltransferase 14 [Source:MGI Symbol;Acc:MGI:1918935]
19. 2900076A07Rik ENSMUSG00000097277 202 0.955 - - - - - 0.955 RIKEN cDNA 2900076A07 gene [Source:MGI Symbol;Acc:MGI:1920242]
20. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.952 - - - - - 0.952 predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
21. Ppl ENSMUSG00000039457 107 0.95 - - - - - 0.950 periplakin [Source:MGI Symbol;Acc:MGI:1194898]
22. 2700046G09Rik ENSMUSG00000097787 327 0.949 - - - - - 0.949 RIKEN cDNA 2700046G09 gene [Source:MGI Symbol;Acc:MGI:1914438]
23. Gm12024 ENSMUSG00000081101 53 0.948 - - - - - 0.948 predicted gene 12024 [Source:MGI Symbol;Acc:MGI:3650980]
24. Cars2 ENSMUSG00000056228 492 0.948 - - - - - 0.948 cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
25. Gm26793 ENSMUSG00000096999 40 0.948 - - - - - 0.948 predicted gene, 26793 [Source:MGI Symbol;Acc:MGI:5477287]
26. 1300002K09Rik 1300002K09Rik 75 0.948 - - - - - 0.948
27. Gm13362 ENSMUSG00000086418 31 0.947 - - - - - 0.947 predicted gene 13362 [Source:MGI Symbol;Acc:MGI:3652150]
28. Gm9083 ENSMUSG00000083033 141 0.947 - - - - - 0.947 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
29. Gm23458 ENSMUSG00000065191 51 0.947 - - - - - 0.947 predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
30. Gm5250 ENSMUSG00000069620 31 0.947 - - - - - 0.947 predicted gene 5250 [Source:MGI Symbol;Acc:MGI:3647667]
31. 4930447F04Rik ENSMUSG00000031182 31 0.947 - - - - - 0.947 RIKEN cDNA 4930447F04 gene [Source:MGI Symbol;Acc:MGI:1922112]
32. Panx2 ENSMUSG00000058441 42 0.947 - - - - - 0.947 pannexin 2 [Source:MGI Symbol;Acc:MGI:1890615]
33. 1810019D21Rik ENSMUSG00000086390 50 0.947 - - - - - 0.947 RIKEN cDNA 1810019D21 gene [Source:MGI Symbol;Acc:MGI:1917021]
34. Ascl2 ENSMUSG00000009248 66 0.946 - - - - - 0.946 achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
35. Gm13613 ENSMUSG00000086819 36 0.946 - - - - - 0.946 predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
36. A830005F24Rik ENSMUSG00000053181 54 0.945 - - - - - 0.945 RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
37. Lama5 ENSMUSG00000015647 351 0.945 - - - - - 0.945 laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
38. Snord15b ENSMUSG00000064966 96 0.945 - - - - - 0.945 small nucleolar RNA, C/D box 14B [Source:MGI Symbol;Acc:MGI:3779515]
39. Cdk10 ENSMUSG00000033862 738 0.943 - - - - - 0.943 cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
40. Esco1 ENSMUSG00000024293 313 0.943 - - - - - 0.943 establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1925055]
41. Insl6 ENSMUSG00000050957 119 0.942 - - - - - 0.942 insulin-like 6 [Source:MGI Symbol;Acc:MGI:1351595]
42. Nphp4 ENSMUSG00000039577 216 0.942 - - - - - 0.942 nephronophthisis 4 (juvenile) homolog (human) [Source:MGI Symbol;Acc:MGI:2384210]
43. Parp16 ENSMUSG00000032392 195 0.941 - - - - - 0.941 poly (ADP-ribose) polymerase family, member 16 [Source:MGI Symbol;Acc:MGI:2446133]
44. Gm2381 ENSMUSG00000092225 56 0.941 - - - - - 0.941 predicted gene 2381 [Source:MGI Symbol;Acc:MGI:3780549]
45. Snta1 ENSMUSG00000027488 128 0.941 - - - - - 0.941 syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
46. Epdr1 ENSMUSG00000002808 561 0.94 - - - - - 0.940 ependymin related protein 1 (zebrafish) [Source:MGI Symbol;Acc:MGI:2145369]
47. Tfeb ENSMUSG00000023990 568 0.939 - - - - - 0.939 transcription factor EB [Source:MGI Symbol;Acc:MGI:103270]
48. Cldn23 ENSMUSG00000055976 75 0.939 - - - - - 0.939 claudin 23 [Source:MGI Symbol;Acc:MGI:1919158]
49. Snx14 ENSMUSG00000032422 399 0.938 - - - - - 0.938 sorting nexin 14 [Source:MGI Symbol;Acc:MGI:2155664]
50. Dmrtb1 ENSMUSG00000028610 67 0.937 - - - - - 0.937 DMRT-like family B with proline-rich C-terminal, 1 [Source:MGI Symbol;Acc:MGI:1927125]
51. Paqr8 ENSMUSG00000025931 160 0.936 - - - - - 0.936 progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
52. Csf1r ENSMUSG00000024621 344 0.936 - - - - - 0.936 colony stimulating factor 1 receptor [Source:MGI Symbol;Acc:MGI:1339758]
53. Gm9803 ENSMUSG00000045886 153 0.936 - - - - - 0.936 predicted gene 9803 [Source:MGI Symbol;Acc:MGI:3704359]
54. D130062J21Rik D130062J21Rik 693 0.936 - - - - - 0.936
55. 1600002H07Rik 740 0.936 - - - - - 0.936 RIKEN cDNA 1600002H07 gene, transcript variant X2
56. Fahd2a ENSMUSG00000027371 222 0.935 - - - - - 0.935 fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
57. Rpl9 ENSMUSG00000047215 1086 0.933 - - - - - 0.933 ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
58. Lrif1 ENSMUSG00000056260 480 0.931 - - - - - 0.931 ligand dependent nuclear receptor interacting factor 1 [Source:MGI Symbol;Acc:MGI:2445214]
59. Qsox2 ENSMUSG00000036327 342 0.931 - - - - - 0.931 quiescin Q6 sulfhydryl oxidase 2 [Source:MGI Symbol;Acc:MGI:2387194]
60. Gm16433 ENSMUSG00000043024 424 0.931 - - - - - 0.931 predicted gene 16433 [Source:MGI Symbol;Acc:MGI:3645626]
61. Hmox1 ENSMUSG00000005413 393 0.929 - - - - - 0.929 heme oxygenase 1 [Source:MGI Symbol;Acc:MGI:96163]
62. Hist1h2ak ENSMUSG00000063021 232 0.927 - - - - - 0.927 histone cluster 1, H2ak [Source:MGI Symbol;Acc:MGI:2448297]
63. Thg1l ENSMUSG00000011254 324 0.927 0.927 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]
64. 2600006K01Rik ENSMUSG00000039798 486 0.926 - - - - - 0.926 RIKEN cDNA 2600006K01 gene [Source:MGI Symbol;Acc:MGI:1917569]
65. Gm15249 Gm15249 167 0.926 - - - - - 0.926
66. Bms1 ENSMUSG00000030138 851 0.925 - - - - - 0.925 BMS1, ribosome biogenesis factor [Source:MGI Symbol;Acc:MGI:2446132]
67. Diap2 Diap2 297 0.925 - - - - - 0.925
68. Poll ENSMUSG00000025218 310 0.924 - - - - - 0.924 polymerase (DNA directed), lambda [Source:MGI Symbol;Acc:MGI:1889000]
69. 4632404H12Rik ENSMUSG00000042579 118 0.924 0.924 - - - - - RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
70. Alyref2 ENSMUSG00000060244 351 0.923 - - - - - 0.923 Aly/REF export factor 2 [Source:MGI Symbol;Acc:MGI:1913144]
71. Gm26869 ENSMUSG00000097879 104 0.923 0.923 - - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
72. Ophn1 ENSMUSG00000031214 1005 0.923 - - - - - 0.923 oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
73. Lamp5 ENSMUSG00000027270 112 0.922 0.922 - - - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
74. C230081A13Rik C230081A13Rik 1846 0.922 - - - - - 0.922
75. Gm14951 ENSMUSG00000084776 22 0.922 0.922 - - - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
76. Slc13a4 ENSMUSG00000029843 66 0.922 0.922 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:MGI Symbol;Acc:MGI:2442367]
77. Gm15443 ENSMUSG00000082588 32 0.922 0.922 - - - - - predicted gene 15443 [Source:MGI Symbol;Acc:MGI:3642525]
78. Gm11531 ENSMUSG00000075587 27 0.922 0.922 - - - - - predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
79. 3010001F23Rik ENSMUSG00000084885 157 0.921 0.921 - - - - - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
80. Gm4353 ENSMUSG00000091900 44 0.92 0.920 - - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
81. Gm5073 ENSMUSG00000083140 19 0.92 0.920 - - - - - predicted pseudogene 5073 [Source:MGI Symbol;Acc:MGI:3643718]
82. Pex12 ENSMUSG00000018733 304 0.92 - - - - - 0.920 peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
83. Smc1b ENSMUSG00000022432 39 0.92 0.920 - - - - - structural maintenance of chromosomes 1B [Source:MGI Symbol;Acc:MGI:2154049]
84. Gm5697 ENSMUSG00000081557 24 0.92 0.920 - - - - - predicted gene 5697 [Source:MGI Symbol;Acc:MGI:3649021]
85. Acsl5 ENSMUSG00000024981 381 0.919 - - - - - 0.919 acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
86. Dnase1l2 ENSMUSG00000024136 149 0.919 - - - - - 0.919 deoxyribonuclease 1-like 2 [Source:MGI Symbol;Acc:MGI:1913955]
87. Bcat2 ENSMUSG00000030826 198 0.919 - - - - - 0.919 branched chain aminotransferase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1276534]
88. Slc7a11 ENSMUSG00000027737 244 0.918 - - - - - 0.918 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 [Source:MGI Symbol;Acc:MGI:1347355]
89. Lhx6 ENSMUSG00000026890 107 0.918 0.918 - - - - - LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]
90. Lrrc4b ENSMUSG00000047085 349 0.917 0.917 - - - - - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
91. Fads3 ENSMUSG00000024664 192 0.917 0.917 - - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
92. Madd ENSMUSG00000040687 523 0.917 - - - - - 0.917 MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
93. Slc17a9 ENSMUSG00000023393 165 0.917 0.917 - - - - - solute carrier family 17, member 9 [Source:MGI Symbol;Acc:MGI:1919107]
94. Gm4217 ENSMUSG00000097954 30 0.916 0.916 - - - - - predicted gene 4217 [Source:MGI Symbol;Acc:MGI:3782393]
95. Serpinb1b ENSMUSG00000051029 30 0.916 0.916 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 1b [Source:MGI Symbol;Acc:MGI:2445361]
96. Serpini1 ENSMUSG00000027834 289 0.916 0.916 - - - - - serine (or cysteine) peptidase inhibitor, clade I, member 1 [Source:MGI Symbol;Acc:MGI:1194506]
97. Ripk3 ENSMUSG00000022221 346 0.915 0.915 - - - - - receptor-interacting serine-threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2154952]
98. Samd15 ENSMUSG00000090812 66 0.914 0.914 - - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
99. Zic2 ENSMUSG00000061524 472 0.914 - - - - - 0.914 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
100. Gm3362 ENSMUSG00000085442 127 0.914 - - - - - 0.914 predicted pseudogene 3362 [Source:MGI Symbol;Acc:MGI:3781540]

There are 663 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA