Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Srp54b

Gene Name Gene ID Reads Annotation
Srp54b ENSMUSG00000112449 101 signal recognition particle 54B [Source:MGI Symbol;Acc:MGI:3714357]







Genes with expression patterns similar to Srp54b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srp54b ENSMUSG00000112449 101 6 1.000 1.000 1.000 1.000 1.000 1.000 signal recognition particle 54B [Source:MGI Symbol;Acc:MGI:3714357]
2. Rnf138rt1 ENSMUSG00000083695 3 1.53 - 0.745 - - 0.785 - ring finger protein 138, retrogene 1 [Source:MGI Symbol;Acc:MGI:1921514]
3. Gm8973 ENSMUSG00000064081 181 0.915 - - 0.915 - - - predicted gene 8973 [Source:MGI Symbol;Acc:MGI:3648534]
4. BC030499 ENSMUSG00000037593 40 0.915 - - 0.915 - - - cDNA sequence BC030499 [Source:MGI Symbol;Acc:MGI:2652869]
5. Nlgn1 ENSMUSG00000063887 37 0.911 - - 0.911 - - - neuroligin 1 [Source:MGI Symbol;Acc:MGI:2179435]
6. Gm16540 ENSMUSG00000090005 7 0.911 - - 0.911 - - - predicted gene 16540 [Source:MGI Symbol;Acc:MGI:4414960]
7. Gm26861 ENSMUSG00000097009 5 0.91 - - 0.910 - - - predicted gene, 26861 [Source:MGI Symbol;Acc:MGI:5477355]
8. Kcna4 ENSMUSG00000042604 14 0.91 - - 0.910 - - - potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
9. Chrna7 ENSMUSG00000030525 7 0.91 - - 0.910 - - - cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]
10. Gm10338 ENSMUSG00000094706 5 0.91 - - 0.910 - - - predicted gene 10338 [Source:MGI Symbol;Acc:MGI:3642676]
11. Spcs2-ps ENSMUSG00000081888 7 0.91 - - 0.910 - - - signal peptidase complex subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3650451]
12. Fbll1 ENSMUSG00000051062 57 0.908 - - 0.908 - - - fibrillarin-like 1 [Source:MGI Symbol;Acc:MGI:3034689]
13. Evx2 ENSMUSG00000001815 45 0.908 - - 0.908 - - - even-skipped homeobox 2 [Source:MGI Symbol;Acc:MGI:95462]
14. Efhc2 ENSMUSG00000025038 12 0.907 - - 0.907 - - - EF-hand domain (C-terminal) containing 2 [Source:MGI Symbol;Acc:MGI:1921655]
15. Gm16185 ENSMUSG00000084911 290 0.907 - - 0.907 - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
16. Pou3f4 ENSMUSG00000056854 95 0.906 - - 0.906 - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
17. Gm14706 ENSMUSG00000083482 26 0.905 - - 0.905 - - - predicted gene 14706 [Source:MGI Symbol;Acc:MGI:3646357]
18. AY074887 ENSMUSG00000044820 41 0.905 - - 0.905 - - - cDNA sequence AY074887 [Source:MGI Symbol;Acc:MGI:3575512]
19. Gm26638 ENSMUSG00000097563 57 0.905 - - 0.905 - - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
20. Gbp8 ENSMUSG00000034438 31 0.904 - - 0.904 - - - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]
21. 4930512H18Rik ENSMUSG00000086866 25 0.902 - - 0.902 - - - RIKEN cDNA 4930512H18 gene [Source:MGI Symbol;Acc:MGI:1922361]
22. Gm5321 ENSMUSG00000064231 50 0.902 - - 0.902 - - - predicted gene 5321 [Source:MGI Symbol;Acc:MGI:3645266]
23. Gm12468 ENSMUSG00000083985 14 0.899 - - 0.899 - - - predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
24. Rpl35a-ps4 ENSMUSG00000083424 62 0.899 - - 0.899 - - - ribosomal protein 35A, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3650995]
25. Gm22748 ENSMUSG00000064427 27 0.899 - - 0.899 - - - predicted gene, 22748 [Source:MGI Symbol;Acc:MGI:5452525]
26. Ppfia2 ENSMUSG00000053825 97 0.897 - - 0.897 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:MGI Symbol;Acc:MGI:2443834]
27. Rasef ENSMUSG00000043003 55 0.895 - - 0.895 - - - RAS and EF hand domain containing [Source:MGI Symbol;Acc:MGI:2448565]
28. Kif9 ENSMUSG00000032489 32 0.894 - - 0.894 - - - kinesin family member 9 [Source:MGI Symbol;Acc:MGI:1098237]
29. Timm8a1 ENSMUSG00000048007 39 0.891 - - 0.891 - - - translocase of inner mitochondrial membrane 8A1 [Source:MGI Symbol;Acc:MGI:1353433]
30. Nol3 ENSMUSG00000014776 29 0.891 - - 0.891 - - - nucleolar protein 3 (apoptosis repressor with CARD domain) [Source:MGI Symbol;Acc:MGI:1925938]
31. Gm16222 ENSMUSG00000086798 72 0.889 - - 0.889 - - - predicted gene 16222 [Source:MGI Symbol;Acc:MGI:3801901]
32. Cacng5 ENSMUSG00000040373 32 0.889 - - 0.889 - - - calcium channel, voltage-dependent, gamma subunit 5 [Source:MGI Symbol;Acc:MGI:2157946]
33. Cdh6 ENSMUSG00000039385 40 0.888 - - 0.888 - - - cadherin 6 [Source:MGI Symbol;Acc:MGI:107435]
34. Ankrd45 ENSMUSG00000044835 23 0.887 - - 0.887 - - - ankyrin repeat domain 45 [Source:MGI Symbol;Acc:MGI:1921094]
35. Wif1 ENSMUSG00000020218 141 0.883 - - 0.883 - - - Wnt inhibitory factor 1 [Source:MGI Symbol;Acc:MGI:1344332]
36. Pdzrn4 ENSMUSG00000036218 102 0.883 - - 0.883 - - - PDZ domain containing RING finger 4 [Source:MGI Symbol;Acc:MGI:3056996]
37. Hpgd ENSMUSG00000031613 116 0.878 - - 0.878 - - - hydroxyprostaglandin dehydrogenase 15 (NAD) [Source:MGI Symbol;Acc:MGI:108085]
38. Acvrl1 ENSMUSG00000000530 121 0.876 - - 0.876 - - - activin A receptor, type II-like 1 [Source:MGI Symbol;Acc:MGI:1338946]
39. Hopx ENSMUSG00000059325 75 0.876 - - 0.876 - - - HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
40. Cdh8 ENSMUSG00000036510 33 0.875 - - 0.875 - - - cadherin 8 [Source:MGI Symbol;Acc:MGI:107434]
41. Tdrkh ENSMUSG00000041912 78 0.875 - - 0.875 - - - tudor and KH domain containing protein [Source:MGI Symbol;Acc:MGI:1919884]
42. Cidea ENSMUSG00000024526 20 0.875 - - 0.875 - - - cell death-inducing DNA fragmentation factor, alpha subunit-like effector A [Source:MGI Symbol;Acc:MGI:1270845]
43. Myb ENSMUSG00000019982 350 0.873 - - 0.873 - - - myeloblastosis oncogene [Source:MGI Symbol;Acc:MGI:97249]
44. Plscr4 ENSMUSG00000032377 53 0.87 - - 0.870 - - - phospholipid scramblase 4 [Source:MGI Symbol;Acc:MGI:2143267]
45. Fstl5 ENSMUSG00000034098 64 0.868 - - 0.868 - - - follistatin-like 5 [Source:MGI Symbol;Acc:MGI:2442179]
46. Rps25-ps1 ENSMUSG00000067344 44 0.868 - - 0.868 - - - ribosomal protein S25, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642902]
47. Rpl21-ps15 ENSMUSG00000083596 25 0.867 - - 0.867 - - - ribosomal protein L21, pseudogene 15 [Source:MGI Symbol;Acc:MGI:3705426]
48. Neil1 ENSMUSG00000032298 123 0.867 - - 0.867 - - - nei endonuclease VIII-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1920024]
49. Fam154b Fam154b 46 0.867 - - 0.867 - - -
50. Gm25734 Gm25734 104 0.864 - - 0.864 - - -
51. Hmx2 ENSMUSG00000050100 31 0.862 - - 0.862 - - - H6 homeobox 2 [Source:MGI Symbol;Acc:MGI:107159]
52. Ctbs ENSMUSG00000028189 182 0.857 - - 0.857 - - - chitobiase [Source:MGI Symbol;Acc:MGI:1921495]
53. 2810455O05Rik ENSMUSG00000085030 37 0.855 - - 0.855 - - - RIKEN cDNA 2810455O05 gene [Source:MGI Symbol;Acc:MGI:1920072]
54. Gm6472 ENSMUSG00000095597 22 0.855 - - 0.855 - - - predicted pseudogene 6472 [Source:MGI Symbol;Acc:MGI:3648396]
55. Gm15526 ENSMUSG00000080205 96 0.855 - - 0.855 - - - predicted gene 15526 [Source:MGI Symbol;Acc:MGI:3782973]
56. Siglech ENSMUSG00000051504 39 0.853 - - 0.853 - - - sialic acid binding Ig-like lectin H [Source:MGI Symbol;Acc:MGI:2443256]
57. 4921507P07Rik ENSMUSG00000029828 44 0.853 - - 0.853 - - - RIKEN cDNA 4921507P07 gene [Source:MGI Symbol;Acc:MGI:1918071]
58. Pde8b ENSMUSG00000021684 54 0.851 - - 0.851 - - - phosphodiesterase 8B [Source:MGI Symbol;Acc:MGI:2443999]
59. Inpp1 ENSMUSG00000026102 176 0.85 - - 0.850 - - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
60. Mterfd3 Mterfd3 452 0.848 - - 0.848 - - -
61. Gm26871 ENSMUSG00000097311 68 0.847 - - 0.847 - - - predicted gene, 26871 [Source:MGI Symbol;Acc:MGI:5477365]
62. Gm26112 Gm26112 127 0.847 - - 0.847 - - -
63. Smarca5-ps ENSMUSG00000052912 83 0.843 - - 0.843 - - - SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene [Source:MGI Symbol;Acc:MGI:2443330]
64. Gm16053 ENSMUSG00000083974 34 0.843 - - 0.843 - - - predicted gene 16053 [Source:MGI Symbol;Acc:MGI:3802033]
65. Rpl31-ps15 ENSMUSG00000097304 63 0.839 - - 0.839 - - - ribosomal protein L31, pseudogene 15 [Source:MGI Symbol;Acc:MGI:3643738]
66. Rnu3a ENSMUSG00000065870, ENSMUSG00000106147 89 0.837 - - 0.837 - - - U3A small nuclear RNA [Source:MGI Symbol;Acc:MGI:97977]
67. Gnat2 ENSMUSG00000009108 42 0.83 - - 0.830 - - - guanine nucleotide binding protein, alpha transducing 2 [Source:MGI Symbol;Acc:MGI:95779]
68. Fam124b ENSMUSG00000043230 95 0.827 - - 0.827 - - - family with sequence similarity 124, member B [Source:MGI Symbol;Acc:MGI:3026880]
69. Gm24362 ENSMUSG00000097995 279 0.827 - - 0.827 - - - predicted gene, 24362 [Source:MGI Symbol;Acc:MGI:5454139]
70. Plac1 ENSMUSG00000061082 138 0.825 - - 0.825 - - - placental specific protein 1 [Source:MGI Symbol;Acc:MGI:1926287]
71. 1700007L15Rik ENSMUSG00000097318 104 0.825 - - 0.825 - - - RIKEN cDNA 1700007L15 gene [Source:MGI Symbol;Acc:MGI:1916581]
72. Tmeff2 ENSMUSG00000026109 242 0.82 - - 0.820 - - - transmembrane protein with EGF-like and two follistatin-like domains 2 [Source:MGI Symbol;Acc:MGI:1861735]
73. Shd ENSMUSG00000039154 498 0.819 - - 0.819 - - - src homology 2 domain-containing transforming protein D [Source:MGI Symbol;Acc:MGI:1099461]
74. Lrsam1 ENSMUSG00000026792 131 0.818 - - 0.818 - - - leucine rich repeat and sterile alpha motif containing 1 [Source:MGI Symbol;Acc:MGI:2684789]
75. Ces2b ENSMUSG00000050097 81 0.815 - - 0.815 - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
76. Chrna3 ENSMUSG00000032303 294 0.812 - - 0.812 - - - cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]
77. Bst2 ENSMUSG00000046718 27 0.812 - - 0.812 - - - bone marrow stromal cell antigen 2 [Source:MGI Symbol;Acc:MGI:1916800]
78. Pfkfb4 ENSMUSG00000025648 262 0.811 - - 0.811 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:MGI Symbol;Acc:MGI:2687284]
79. Rgs7bp ENSMUSG00000021719 144 0.81 - - 0.810 - - - regulator of G-protein signalling 7 binding protein [Source:MGI Symbol;Acc:MGI:106334]
80. Gm13352 ENSMUSG00000086882 945 0.808 - - 0.808 - - - predicted gene 13352 [Source:MGI Symbol;Acc:MGI:3651070]
81. Art5 ENSMUSG00000070424 81 0.806 - - 0.806 - - - ADP-ribosyltransferase 5 [Source:MGI Symbol;Acc:MGI:107948]
82. Gm11516 ENSMUSG00000083764 32 0.804 - - 0.804 - - - predicted gene 11516 [Source:MGI Symbol;Acc:MGI:3649759]
83. Gm24357 ENSMUSG00000064797 216 0.804 - - 0.804 - - - predicted gene, 24357 [Source:MGI Symbol;Acc:MGI:5454134]
84. Kctd14 ENSMUSG00000051727 574 0.802 - - 0.802 - - - potassium channel tetramerisation domain containing 14 [Source:MGI Symbol;Acc:MGI:1289222]
85. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.799 - - 0.799 - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
86. Gm11824 ENSMUSG00000082128 50 0.799 - - 0.799 - - - predicted gene 11824 [Source:MGI Symbol;Acc:MGI:3651313]
87. Vangl1 ENSMUSG00000027860 320 0.797 - - 0.797 - - - VANGL planar cell polarity 1 [Source:MGI Symbol;Acc:MGI:2159344]
88. Slc17a6 ENSMUSG00000030500 178 0.794 - - 0.794 - - - solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 [Source:MGI Symbol;Acc:MGI:2156052]
89. Ppp1r3b ENSMUSG00000046794 68 0.792 - - 0.792 - - - protein phosphatase 1, regulatory subunit 3B [Source:MGI Symbol;Acc:MGI:2177268]
90. Tmed5 ENSMUSG00000063406 1386 0.792 - - 0.792 - - - transmembrane p24 trafficking protein 5 [Source:MGI Symbol;Acc:MGI:1921586]
91. Zfp106 ENSMUSG00000027288 2359 0.791 - - 0.791 - - - zinc finger protein 106 [Source:MGI Symbol;Acc:MGI:1270153]
92. Lepr ENSMUSG00000057722 115 0.79 - - 0.790 - - - leptin receptor [Source:MGI Symbol;Acc:MGI:104993]
93. Enox2 ENSMUSG00000031109 931 0.788 - - 0.788 - - - ecto-NOX disulfide-thiol exchanger 2 [Source:MGI Symbol;Acc:MGI:2384799]
94. Gm22107 ENSMUSG00000084497 2 0.785 - - - - 0.785 - predicted gene, 22107 [Source:MGI Symbol;Acc:MGI:5451884]
95. 4930471M09Rik ENSMUSG00000097693 1 0.785 - - - - 0.785 - RIKEN cDNA 4930471M09 gene [Source:MGI Symbol;Acc:MGI:1922150]
96. Hist1h1d ENSMUSG00000052565 183 0.785 - - 0.785 - - - histone cluster 1, H1d [Source:MGI Symbol;Acc:MGI:107502]
97. Hrh3 ENSMUSG00000039059 5 0.785 - - - - 0.785 - histamine receptor H3 [Source:MGI Symbol;Acc:MGI:2139279]
98. Gm16722 Gm16722 4 0.785 - - - - 0.785 -
99. Gm6223 ENSMUSG00000096647 2 0.785 - - - - 0.785 - predicted gene 6223 [Source:MGI Symbol;Acc:MGI:3646615]
100. A630014C17Rik ENSMUSG00000086395 10 0.785 - - - - 0.785 - RIKEN cDNA A630014C17 gene [Source:MGI Symbol;Acc:MGI:3026989]

There are 96 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA