Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sri

Gene Name Gene ID Reads Annotation
Sri ENSMUSG00000003161 4476 sorcin [Source:MGI Symbol;Acc:MGI:98419]







Genes with expression patterns similar to Sri

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sri ENSMUSG00000003161 4476 6 1.000 1.000 1.000 1.000 1.000 1.000 sorcin [Source:MGI Symbol;Acc:MGI:98419]
2. Bex2 ENSMUSG00000042750 4283 0.878 0.878 - - - - - brain expressed X-linked 2 [Source:MGI Symbol;Acc:MGI:1338017]
3. Slfn9 ENSMUSG00000069793 621 0.861 0.861 - - - - - schlafen 9 [Source:MGI Symbol;Acc:MGI:2445121]
4. Glmn ENSMUSG00000029276 726 0.857 0.857 - - - - - glomulin, FKBP associated protein [Source:MGI Symbol;Acc:MGI:2141180]
5. Slmo2 3335 0.853 0.853 - - - - - slowmo homolog 2 (Drosophila), transcript variant X1
6. Suclg1 ENSMUSG00000052738 4542 0.847 0.847 - - - - - succinate-CoA ligase, GDP-forming, alpha subunit [Source:MGI Symbol;Acc:MGI:1927234]
7. Stx3 ENSMUSG00000041488 1755 0.847 0.847 - - - - - syntaxin 3 [Source:MGI Symbol;Acc:MGI:103077]
8. Gtl3 Gtl3 1883 0.847 0.847 - - - - -
9. Tbl1xr1 ENSMUSG00000027630 4091 0.846 0.846 - - - - - transducin (beta)-like 1X-linked receptor 1 [Source:MGI Symbol;Acc:MGI:2441730]
10. Slk ENSMUSG00000025060 3182 0.846 0.846 - - - - - STE20-like kinase [Source:MGI Symbol;Acc:MGI:103241]
11. Snap47 ENSMUSG00000009894 8699 0.84 0.840 - - - - - synaptosomal-associated protein, 47 [Source:MGI Symbol;Acc:MGI:1915076]
12. Rab11fip3 ENSMUSG00000037098 2238 0.839 0.839 - - - - - RAB11 family interacting protein 3 (class II) [Source:MGI Symbol;Acc:MGI:2444431]
13. Ppm1g ENSMUSG00000029147 5699 0.838 0.838 - - - - - protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform [Source:MGI Symbol;Acc:MGI:106065]
14. Mbd3 ENSMUSG00000035478 4970 0.836 0.836 - - - - - methyl-CpG binding domain protein 3 [Source:MGI Symbol;Acc:MGI:1333812]
15. Clic1 ENSMUSG00000007041 2862 0.835 0.835 - - - - - chloride intracellular channel 1 [Source:MGI Symbol;Acc:MGI:2148924]
16. Rbbp5 ENSMUSG00000026439 3721 0.826 0.826 - - - - - retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit [Source:MGI Symbol;Acc:MGI:1918367]
17. Rarg ENSMUSG00000001288 1281 0.825 0.825 - - - - - retinoic acid receptor, gamma [Source:MGI Symbol;Acc:MGI:97858]
18. Arhgef7 ENSMUSG00000031511 5683 0.825 0.825 - - - - - Rho guanine nucleotide exchange factor (GEF7) [Source:MGI Symbol;Acc:MGI:1860493]
19. Kif4 ENSMUSG00000034311 2954 0.821 0.821 - - - - - kinesin family member 4 [Source:MGI Symbol;Acc:MGI:108389]
20. 4833420G17Rik ENSMUSG00000062822 937 0.82 0.820 - - - - - RIKEN cDNA 4833420G17 gene [Source:MGI Symbol;Acc:MGI:1914642]
21. Mex3b ENSMUSG00000057706 3344 0.819 0.819 - - - - - mex3 RNA binding family member B [Source:MGI Symbol;Acc:MGI:1918252]
22. Otud7b ENSMUSG00000038495 1631 0.819 0.819 - - - - - OTU domain containing 7B [Source:MGI Symbol;Acc:MGI:2654703]
23. Cdc40 ENSMUSG00000038446 1468 0.818 0.818 - - - - - cell division cycle 40 [Source:MGI Symbol;Acc:MGI:1918963]
24. Sall2 ENSMUSG00000049532 3472 0.817 0.817 - - - - - spalt like transcription factor 2 [Source:MGI Symbol;Acc:MGI:1354373]
25. Zmym3 ENSMUSG00000031310 2618 0.817 0.817 - - - - - zinc finger, MYM-type 3 [Source:MGI Symbol;Acc:MGI:1927231]
26. AI987944 ENSMUSG00000056383 1199 0.815 0.815 - - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
27. Usp13 ENSMUSG00000056900 668 0.814 0.814 - - - - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:MGI Symbol;Acc:MGI:1919857]
28. Trappc8 ENSMUSG00000033382 742 0.813 0.813 - - - - - trafficking protein particle complex 8 [Source:MGI Symbol;Acc:MGI:2443008]
29. Raf1 ENSMUSG00000000441 2091 0.813 0.813 - - - - - v-raf-leukemia viral oncogene 1 [Source:MGI Symbol;Acc:MGI:97847]
30. Tenm4 ENSMUSG00000048078 4259 0.813 0.813 - - - - - teneurin transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2447063]
31. Fbxl12 ENSMUSG00000066892 743 0.811 0.811 - - - - - F-box and leucine-rich repeat protein 12 [Source:MGI Symbol;Acc:MGI:1354738]
32. Stx6 ENSMUSG00000026470 1786 0.81 0.810 - - - - - syntaxin 6 [Source:MGI Symbol;Acc:MGI:1926235]
33. Fam50a ENSMUSG00000001962 2244 0.809 0.809 - - - - - family with sequence similarity 50, member A [Source:MGI Symbol;Acc:MGI:1351626]
34. Dffa ENSMUSG00000028974 1127 0.807 0.807 - - - - - DNA fragmentation factor, alpha subunit [Source:MGI Symbol;Acc:MGI:1196227]
35. Sgce ENSMUSG00000004631 1414 0.807 0.807 - - - - - sarcoglycan, epsilon [Source:MGI Symbol;Acc:MGI:1329042]
36. Arhgef1 ENSMUSG00000040940 1610 0.805 0.805 - - - - - Rho guanine nucleotide exchange factor (GEF) 1 [Source:MGI Symbol;Acc:MGI:1353510]
37. Copz1 ENSMUSG00000060992 7892 0.805 0.805 - - - - - coatomer protein complex, subunit zeta 1 [Source:MGI Symbol;Acc:MGI:1929063]
38. Lamtor2 ENSMUSG00000028062 570 0.803 0.803 - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
39. Zfp449 ENSMUSG00000073176 415 0.802 0.802 - - - - - zinc finger protein 449 [Source:MGI Symbol;Acc:MGI:1925869]
40. Syap1 ENSMUSG00000031357 404 0.802 0.802 - - - - - synapse associated protein 1 [Source:MGI Symbol;Acc:MGI:1914293]
41. Rilpl1 ENSMUSG00000029392 1313 0.802 0.802 - - - - - Rab interacting lysosomal protein-like 1 [Source:MGI Symbol;Acc:MGI:1922945]
42. Kras ENSMUSG00000030265 3040 0.802 0.802 - - - - - Kirsten rat sarcoma viral oncogene homolog [Source:MGI Symbol;Acc:MGI:96680]
43. Arfgef2 ENSMUSG00000074582 1177 0.802 0.802 - - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:MGI Symbol;Acc:MGI:2139354]
44. Inadl 509 0.801 0.801 - - - - - InaD-like (Drosophila), transcript variant X9
45. Tk1 ENSMUSG00000025574 4404 0.801 0.801 - - - - - thymidine kinase 1 [Source:MGI Symbol;Acc:MGI:98763]
46. Smo ENSMUSG00000001761 3918 0.8 0.800 - - - - - smoothened, frizzled class receptor [Source:MGI Symbol;Acc:MGI:108075]
47. Mrpl46 ENSMUSG00000030612 1324 0.8 0.800 - - - - - mitochondrial ribosomal protein L46 [Source:MGI Symbol;Acc:MGI:1914558]
48. Rdh11 ENSMUSG00000066441 818 0.8 0.800 - - - - - retinol dehydrogenase 11 [Source:MGI Symbol;Acc:MGI:102581]
49. Rpl11 ENSMUSG00000059291 817 0.799 0.799 - - - - - ribosomal protein L11 [Source:MGI Symbol;Acc:MGI:1914275]
50. Tjap1 ENSMUSG00000012296 1888 0.798 0.798 - - - - - tight junction associated protein 1 [Source:MGI Symbol;Acc:MGI:1921344]
51. L3mbtl2 ENSMUSG00000022394 583 0.798 0.798 - - - - - L3MBTL2 polycomb repressive complex 1 subunit [Source:MGI Symbol;Acc:MGI:2443584]
52. Impdh2 ENSMUSG00000062867 107 0.798 0.798 - - - - - inosine monophosphate dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:109367]
53. Angel2 ENSMUSG00000026634 2532 0.797 0.797 - - - - - angel homolog 2 [Source:MGI Symbol;Acc:MGI:1196310]
54. Slc25a14 ENSMUSG00000031105 506 0.796 0.796 - - - - - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:MGI Symbol;Acc:MGI:1330823]
55. Lhfp ENSMUSG00000048332 1807 0.795 0.795 - - - - - lipoma HMGIC fusion partner [Source:MGI Symbol;Acc:MGI:1920048]
56. Pqbp1 ENSMUSG00000031157 3537 0.795 0.795 - - - - - polyglutamine binding protein 1 [Source:MGI Symbol;Acc:MGI:1859638]
57. Gm26547 ENSMUSG00000097095 181 0.795 0.795 - - - - - predicted gene, 26547 [Source:MGI Symbol;Acc:MGI:5477041]
58. Sec22a ENSMUSG00000034473 906 0.794 0.794 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:MGI Symbol;Acc:MGI:2447876]
59. Fbxo28 ENSMUSG00000047539 2011 0.794 0.794 - - - - - F-box protein 28 [Source:MGI Symbol;Acc:MGI:1261890]
60. Crnkl1 ENSMUSG00000001767 959 0.793 0.793 - - - - - crooked neck pre-mRNA splicing factor 1 [Source:MGI Symbol;Acc:MGI:1914127]
61. Zbtbd6 Zbtbd6 314 0.793 0.793 - - - - -
62. Pctp ENSMUSG00000020553 543 0.793 0.793 - - - - - phosphatidylcholine transfer protein [Source:MGI Symbol;Acc:MGI:107375]
63. Rnf40 ENSMUSG00000030816 1096 0.792 0.792 - - - - - ring finger protein 40 [Source:MGI Symbol;Acc:MGI:2142048]
64. Mtfr1l ENSMUSG00000046671 3218 0.792 0.792 - - - - - mitochondrial fission regulator 1-like [Source:MGI Symbol;Acc:MGI:1924074]
65. Inpp5k ENSMUSG00000006127 361 0.792 0.792 - - - - - inositol polyphosphate 5-phosphatase K [Source:MGI Symbol;Acc:MGI:1194899]
66. Pdxdc1 ENSMUSG00000022680 1119 0.792 0.792 - - - - - pyridoxal-dependent decarboxylase domain containing 1 [Source:MGI Symbol;Acc:MGI:1920909]
67. Slc25a11 ENSMUSG00000014606 1671 0.792 0.792 - - - - - solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 [Source:MGI Symbol;Acc:MGI:1915113]
68. Zcchc4 ENSMUSG00000029179 1006 0.791 0.791 - - - - - zinc finger, CCHC domain containing 4 [Source:MGI Symbol;Acc:MGI:1926046]
69. Apex2 ENSMUSG00000025269 2657 0.791 0.791 - - - - - apurinic/apyrimidinic endonuclease 2 [Source:MGI Symbol;Acc:MGI:1924872]
70. Donson ENSMUSG00000022960 569 0.791 0.791 - - - - - downstream neighbor of SON [Source:MGI Symbol;Acc:MGI:1890621]
71. Ccdc134 ENSMUSG00000068114 388 0.79 0.790 - - - - - coiled-coil domain containing 134 [Source:MGI Symbol;Acc:MGI:1923707]
72. E030030I06Rik ENSMUSG00000097327 663 0.79 0.790 - - - - - RIKEN cDNA E030030I06 gene [Source:MGI Symbol;Acc:MGI:2442914]
73. Bloc1s3 ENSMUSG00000057667 183 0.79 0.790 - - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:MGI Symbol;Acc:MGI:2678952]
74. Zfp867 ENSMUSG00000054519 263 0.79 0.790 - - - - - zinc finger protein 867 [Source:MGI Symbol;Acc:MGI:2681848]
75. Abcb7 ENSMUSG00000031333 1518 0.79 0.790 - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:MGI Symbol;Acc:MGI:109533]
76. Dnajc13 ENSMUSG00000032560 1632 0.789 0.789 - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:MGI Symbol;Acc:MGI:2676368]
77. Zdhhc8 ENSMUSG00000060166, ENSMUSG00000108733 643 0.789 0.789 - - - - - zinc finger, DHHC domain containing 8 [Source:MGI Symbol;Acc:MGI:1338012]
78. Brsk1 ENSMUSG00000035390 92 0.789 0.789 - - - - - BR serine/threonine kinase 1 [Source:MGI Symbol;Acc:MGI:2685946]
79. Dnajc24 ENSMUSG00000027166 393 0.789 0.789 - - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:MGI Symbol;Acc:MGI:1919522]
80. Cask ENSMUSG00000031012 1836 0.789 0.789 - - - - - calcium/calmodulin-dependent serine protein kinase (MAGUK family) [Source:MGI Symbol;Acc:MGI:1309489]
81. Phpt1 ENSMUSG00000036504 2457 0.788 0.788 - - - - - phosphohistidine phosphatase 1 [Source:MGI Symbol;Acc:MGI:1922704]
82. Gtf2h1 ENSMUSG00000006599 1472 0.788 0.788 - - - - - general transcription factor II H, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1277216]
83. Gm12174 ENSMUSG00000080776 570 0.788 0.788 - - - - - predicted gene 12174 [Source:MGI Symbol;Acc:MGI:3651722]
84. Pdzd4 ENSMUSG00000002006 400 0.788 0.788 - - - - - PDZ domain containing 4 [Source:MGI Symbol;Acc:MGI:2443483]
85. Vcpip1 ENSMUSG00000045210 1764 0.788 0.788 - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:MGI Symbol;Acc:MGI:1917925]
86. Lhx2 ENSMUSG00000000247 529 0.787 0.787 - - - - - LIM homeobox protein 2 [Source:MGI Symbol;Acc:MGI:96785]
87. Ykt6 ENSMUSG00000002741 5433 0.787 0.787 - - - - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1927550]
88. Trmu ENSMUSG00000022386 468 0.787 0.787 - - - - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:MGI Symbol;Acc:MGI:1919276]
89. Prr5 ENSMUSG00000036106 931 0.787 0.787 - - - - - proline rich 5 (renal) [Source:MGI Symbol;Acc:MGI:1924714]
90. Gm24539 ENSMUSG00000093874 77 0.787 0.787 - - - - - predicted gene, 24539 [Source:MGI Symbol;Acc:MGI:5454316]
91. Dynll1 ENSMUSG00000009013 23838 0.787 0.787 - - - - - dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457]
92. Mcm9 ENSMUSG00000058298 926 0.787 0.787 - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1918817]
93. Tbp ENSMUSG00000014767 2754 0.787 0.787 - - - - - TATA box binding protein [Source:MGI Symbol;Acc:MGI:101838]
94. Oprl1 ENSMUSG00000027584 141 0.787 0.787 - - - - - opioid receptor-like 1 [Source:MGI Symbol;Acc:MGI:97440]
95. Sde2 ENSMUSG00000038806 1632 0.787 0.787 - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:MGI Symbol;Acc:MGI:2384788]
96. BC052040 ENSMUSG00000040282 1489 0.787 0.787 - - - - - cDNA sequence BC052040 [Source:MGI Symbol;Acc:MGI:3026886]
97. Usp45 ENSMUSG00000040455 1493 0.787 0.787 - - - - - ubiquitin specific petidase 45 [Source:MGI Symbol;Acc:MGI:101850]
98. Psph ENSMUSG00000029446 491 0.787 0.787 - - - - - phosphoserine phosphatase [Source:MGI Symbol;Acc:MGI:97788]
99. Cnbp ENSMUSG00000030057 10385 0.787 0.787 - - - - - cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]
100. Cdk5rap3 ENSMUSG00000018669 1103 0.786 0.786 - - - - - CDK5 regulatory subunit associated protein 3 [Source:MGI Symbol;Acc:MGI:1933126]

There are 167 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA