Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Srgap3

Gene Name Gene ID Reads Annotation
Srgap3 ENSMUSG00000030257 2941 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]







Genes with expression patterns similar to Srgap3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srgap3 ENSMUSG00000030257 2941 6 1.000 1.000 1.000 1.000 1.000 1.000 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
2. Nhlh1 ENSMUSG00000051251 2017 4.889 0.870 0.859 0.851 0.770 0.794 0.745 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
3. Tubb2b ENSMUSG00000045136 41060 4.074 0.765 - 0.847 0.842 0.720 0.900 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
4. Gpr98 Gpr98 1797 4.004 0.838 - 0.761 0.705 0.848 0.852
5. Ckb ENSMUSG00000001270 8443 3.999 0.837 0.729 0.825 0.800 0.808 - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
6. Apba2 ENSMUSG00000030519 840 3.994 0.869 0.785 0.760 0.804 - 0.776 amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
7. Elavl3 ENSMUSG00000003410 2830 3.974 0.795 - 0.888 0.760 0.777 0.754 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
8. Glra1 ENSMUSG00000000263 586 3.863 0.712 - 0.722 0.779 0.876 0.774 glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]
9. Dll3 ENSMUSG00000003436 1086 3.801 0.723 0.734 0.753 0.753 - 0.838 delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
10. Hes5 ENSMUSG00000048001 1640 3.338 0.792 - - 0.792 0.896 0.858 hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
11. Rhbdl3 ENSMUSG00000017692 783 3.31 0.807 - 0.845 0.746 - 0.912 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
12. Trp53i11 ENSMUSG00000068735 15944 3.281 0.826 0.793 0.875 0.787 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
13. Phf21b ENSMUSG00000016624 849 3.235 0.719 - 0.854 0.825 0.837 - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
14. Pou3f3 ENSMUSG00000045515 5137 3.2 - 0.787 0.788 0.784 0.841 - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
15. Miat ENSMUSG00000097767 4258 3.177 0.794 - 0.734 0.868 - 0.781 myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
16. Myt1 ENSMUSG00000010505 661 3.14 0.703 - 0.835 0.710 - 0.892 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
17. Sox2 ENSMUSG00000074637 8409 3.101 0.726 0.799 - 0.824 - 0.752 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
18. Map2 ENSMUSG00000015222 2576 3.064 0.802 0.721 0.797 0.744 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
19. Pou3f2 ENSMUSG00000095139 2416 3.064 0.761 - 0.700 0.797 - 0.806 POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
20. Btbd17 ENSMUSG00000000202 565 3.045 0.792 0.708 0.767 - - 0.778 BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
21. Sox2ot ENSMUSG00000105265 475 2.993 0.713 - 0.809 0.761 - 0.710 SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
22. Sox3 ENSMUSG00000045179 1137 2.948 0.806 0.706 0.715 - - 0.721 SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
23. 2610017I09Rik 2610017I09Rik 1595 2.558 0.837 - - 0.845 - 0.876
24. Tagln3 ENSMUSG00000022658 6054 2.511 - - 0.790 0.824 - 0.897 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
25. Celsr2 ENSMUSG00000068740 2010 2.448 - - 0.878 - 0.854 0.716 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
26. Tubb3 ENSMUSG00000062380 9211 2.436 0.804 - - 0.823 - 0.809 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
27. Dpysl5 ENSMUSG00000029168 2096 2.428 0.825 - 0.849 0.754 - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
28. Zic1 ENSMUSG00000032368 7734 2.409 - - - 0.837 0.833 0.739 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
29. Ncan ENSMUSG00000002341 521 2.393 - - 0.821 0.780 - 0.792 neurocan [Source:MGI Symbol;Acc:MGI:104694]
30. Nrarp ENSMUSG00000078202 1708 2.386 0.819 - 0.773 0.794 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
31. Gprin1 ENSMUSG00000069227 1013 2.377 - - 0.786 - 0.862 0.729 G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
32. Mapk8ip2 ENSMUSG00000022619 910 2.376 - - 0.786 0.799 - 0.791 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
33. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 2.37 - - - 0.764 0.840 0.766 cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
34. Elavl2 ENSMUSG00000008489 2109 2.359 0.821 - - 0.701 - 0.837 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
35. Nhlh2 ENSMUSG00000048540 1310 2.353 0.765 - - 0.779 - 0.809 nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
36. Map1b ENSMUSG00000052727 28977 2.349 0.701 - 0.836 0.812 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
37. Fez1 ENSMUSG00000032118 2537 2.34 - - 0.745 0.732 - 0.863 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
38. Fam171b ENSMUSG00000048388 2388 2.333 0.875 0.756 - - 0.702 - family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
39. Rtn1 ENSMUSG00000021087 2547 2.313 0.718 - 0.765 - - 0.830 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
40. Neurod4 ENSMUSG00000048015 764 2.31 0.746 - - 0.773 - 0.791 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
41. Brsk2 ENSMUSG00000053046 398 2.301 - - - 0.715 0.792 0.794 BR serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1923020]
42. Ap3b2 ENSMUSG00000062444 565 2.298 0.701 - 0.864 - - 0.733 adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
43. Tmsb4x ENSMUSG00000049775 61014 2.297 0.708 - - 0.782 - 0.807 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
44. 1700106J16Rik 1700106J16Rik 331 2.288 0.819 - 0.722 - - 0.747
45. Chrna4 ENSMUSG00000027577 941 2.278 - 0.732 - 0.743 - 0.803 cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
46. Nes ENSMUSG00000004891 8017 2.274 - - 0.841 0.719 - 0.714 nestin [Source:MGI Symbol;Acc:MGI:101784]
47. Scrt1 ENSMUSG00000048385 155 2.265 - - 0.762 0.716 - 0.787 scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
48. Msi1 ENSMUSG00000054256 13785 2.262 - - 0.714 0.743 - 0.805 musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
49. C130071C03Rik ENSMUSG00000050334 1582 2.261 0.703 - - 0.812 - 0.746 RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
50. Scg3 ENSMUSG00000032181 445 2.257 0.781 0.711 0.765 - - - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
51. Nova2 ENSMUSG00000030411 400 2.239 - - 0.740 - 0.799 0.700 neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
52. Hes6 ENSMUSG00000067071 1692 2.209 0.760 - 0.728 0.721 - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
53. Enc1 ENSMUSG00000041773 2185 2.199 - - 0.739 0.718 - 0.742 ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
54. Rfx4 ENSMUSG00000020037 455 2.198 0.704 - 0.784 - - 0.710 regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
55. Trim2 ENSMUSG00000027993 3587 1.693 - - - 0.819 - 0.874 tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
56. Soga3 ENSMUSG00000038916 3972 1.667 - - 0.830 0.837 - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
57. Pgpep1 ENSMUSG00000056204 2455 1.647 - - - 0.799 - 0.848 pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
58. Srrm4 ENSMUSG00000063919 190 1.627 - - 0.810 - - 0.817 serine/arginine repetitive matrix 4 [Source:MGI Symbol;Acc:MGI:1916205]
59. Gng3 ENSMUSG00000071658 2104 1.617 - - - - 0.814 0.803 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
60. Tuba1a ENSMUSG00000072235 51129 1.608 - - 0.787 0.821 - - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
61. AI854517 AI854517 539 1.6 - - - 0.775 - 0.825
62. Syn1 ENSMUSG00000037217 289 1.591 - - 0.820 - - 0.771 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
63. Zswim5 ENSMUSG00000033948 463 1.587 0.808 - - - - 0.779 zinc finger SWIM-type containing 5 [Source:MGI Symbol;Acc:MGI:1921714]
64. A930011O12Rik A930011O12Rik 359 1.584 - - 0.824 - - 0.760
65. Gpm6b ENSMUSG00000031342 715 1.58 0.779 - - - - 0.801 glycoprotein m6b [Source:MGI Symbol;Acc:MGI:107672]
66. Ago1 ENSMUSG00000041530 7703 1.573 - - 0.760 - - 0.813 argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
67. Hoxc9 ENSMUSG00000036139 4145 1.572 - - 0.818 0.754 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
68. Rbfox3 ENSMUSG00000025576 384 1.57 - - 0.811 - - 0.759 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
69. Hoxb9 ENSMUSG00000020875 2764 1.569 - - - 0.755 0.814 - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
70. Frmd5 ENSMUSG00000027238 224 1.554 0.712 - - - - 0.842 FERM domain containing 5 [Source:MGI Symbol;Acc:MGI:2442557]
71. Cotl1 ENSMUSG00000031827 4560 1.55 0.719 - 0.831 - - - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
72. Elavl4 ENSMUSG00000028546 6084 1.549 - - - 0.737 - 0.812 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
73. Cntn2 ENSMUSG00000053024 1798 1.547 - - 0.703 0.844 - - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
74. Spsb4 ENSMUSG00000046997 5432 1.544 0.797 - 0.747 - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
75. Ednrb ENSMUSG00000022122 1909 1.541 0.750 - - - 0.791 - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
76. Ebf1 ENSMUSG00000057098 3112 1.539 0.715 - - 0.824 - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
77. Rgma ENSMUSG00000070509 1952 1.535 0.791 - 0.744 - - - repulsive guidance molecule family member A [Source:MGI Symbol;Acc:MGI:2679262]
78. Spock2 ENSMUSG00000058297 1096 1.53 0.748 - - - - 0.782 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
79. Acot7 ENSMUSG00000028937 5139 1.529 - - 0.776 - - 0.753 acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
80. Gldc ENSMUSG00000024827 695 1.528 0.751 0.777 - - - - glycine decarboxylase [Source:MGI Symbol;Acc:MGI:1341155]
81. Sptbn2 ENSMUSG00000067889 4571 1.527 - - 0.765 - - 0.762 spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
82. Kbtbd11 ENSMUSG00000055675 1156 1.527 0.801 - 0.726 - - - kelch repeat and BTB (POZ) domain containing 11 [Source:MGI Symbol;Acc:MGI:1922151]
83. Sema5b ENSMUSG00000052133 891 1.526 - 0.749 - - 0.777 - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
84. Pax6 ENSMUSG00000027168 2751 1.524 0.817 - - 0.707 - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
85. Rundc3a ENSMUSG00000006575 421 1.521 - - - 0.759 - 0.762 RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
86. Fabp7 ENSMUSG00000019874 3183 1.52 0.782 - 0.738 - - - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
87. Lhfpl4 ENSMUSG00000042873 331 1.512 - - - 0.716 - 0.796 lipoma HMGIC fusion partner-like protein 4 [Source:MGI Symbol;Acc:MGI:3057108]
88. 9330159F19Rik ENSMUSG00000004360 464 1.505 0.708 - - - - 0.797 RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
89. Uchl1 ENSMUSG00000029223 2803 1.5 - - 0.765 - - 0.735 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
90. Cdk5r1 ENSMUSG00000048895 2376 1.494 - - 0.706 - - 0.788 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
91. Prmt8 ENSMUSG00000030350 342 1.492 0.777 - - 0.715 - - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
92. Nrcam ENSMUSG00000020598 266 1.489 - - - 0.736 - 0.753 neuronal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:104750]
93. Syt11 ENSMUSG00000068923 7491 1.488 - - 0.743 - - 0.745 synaptotagmin XI [Source:MGI Symbol;Acc:MGI:1859547]
94. Epha5 ENSMUSG00000029245 256 1.484 - - 0.775 0.709 - - Eph receptor A5 [Source:MGI Symbol;Acc:MGI:99654]
95. Slain1 ENSMUSG00000055717 237 1.482 0.747 - - - - 0.735 SLAIN motif family, member 1 [Source:MGI Symbol;Acc:MGI:2145578]
96. Jam2 ENSMUSG00000053062 1020 1.481 0.709 - - 0.772 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
97. St18 ENSMUSG00000033740 408 1.471 0.709 - 0.762 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
98. Dcx ENSMUSG00000031285 1733 1.47 0.721 - - - - 0.749 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
99. Rufy3 ENSMUSG00000029291 695 1.468 - - 0.739 - - 0.729 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
100. Crmp1 ENSMUSG00000029121 3165 1.466 - - - - 0.730 0.736 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]

There are 138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA