Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Srf

Gene Name Gene ID Reads Annotation
Srf ENSMUSG00000015605 4253 serum response factor [Source:MGI Symbol;Acc:MGI:106658]







Genes with expression patterns similar to Srf

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Srf ENSMUSG00000015605 4253 6 1.000 1.000 1.000 1.000 1.000 1.000 serum response factor [Source:MGI Symbol;Acc:MGI:106658]
2. Ylpm1 ENSMUSG00000021244 4313 1.613 0.838 0.775 - - - - YLP motif containing 1 [Source:MGI Symbol;Acc:MGI:1926195]
3. G6pdx ENSMUSG00000031400 2910 1.529 0.742 0.787 - - - - glucose-6-phosphate dehydrogenase X-linked [Source:MGI Symbol;Acc:MGI:105979]
4. Tmed3 ENSMUSG00000032353 1199 0.878 - 0.878 - - - - transmembrane p24 trafficking protein 3 [Source:MGI Symbol;Acc:MGI:1913361]
5. Xiap ENSMUSG00000025860 3219 0.876 - 0.876 - - - - X-linked inhibitor of apoptosis [Source:MGI Symbol;Acc:MGI:107572]
6. Nhsl2 ENSMUSG00000079481 3217 0.875 - 0.875 - - - - NHS-like 2 [Source:MGI Symbol;Acc:MGI:3645090]
7. Pno1 ENSMUSG00000020116 5621 0.875 - 0.875 - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
8. Tor1aip1 ENSMUSG00000026466 1480 0.87 - 0.870 - - - - torsin A interacting protein 1 [Source:MGI Symbol;Acc:MGI:3582693]
9. Gbas 3724 0.87 - 0.870 - - - - glioblastoma amplified sequence, transcript variant X3
10. Ccdc74a ENSMUSG00000041617 512 0.865 - 0.865 - - - - coiled-coil domain containing 74A [Source:MGI Symbol;Acc:MGI:1919565]
11. Ppp1r11 ENSMUSG00000036398 2733 0.853 - 0.853 - - - - protein phosphatase 1, regulatory inhibitor subunit 11 [Source:MGI Symbol;Acc:MGI:1923747]
12. Cbx5 ENSMUSG00000009575 10784 0.852 - 0.852 - - - - chromobox 5 [Source:MGI Symbol;Acc:MGI:109372]
13. Gnai3 ENSMUSG00000000001 5474 0.85 - 0.850 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting 3 [Source:MGI Symbol;Acc:MGI:95773]
14. Ikbip ENSMUSG00000019975 1144 0.848 - 0.848 - - - - IKBKB interacting protein [Source:MGI Symbol;Acc:MGI:1914704]
15. Prpf40a ENSMUSG00000061136 8476 0.848 - 0.848 - - - - pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]
16. Rab2a ENSMUSG00000047187 6615 0.842 - 0.842 - - - - RAB2A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1928750]
17. Pfdn5 ENSMUSG00000001289 5177 0.841 - 0.841 - - - - prefoldin 5 [Source:MGI Symbol;Acc:MGI:1928753]
18. Nucb1 ENSMUSG00000030824 3747 0.841 - 0.841 - - - - nucleobindin 1 [Source:MGI Symbol;Acc:MGI:97388]
19. Hltf ENSMUSG00000002428 806 0.839 0.839 - - - - - helicase-like transcription factor [Source:MGI Symbol;Acc:MGI:1196437]
20. Arglu1 ENSMUSG00000040459 6057 0.836 - 0.836 - - - - arginine and glutamate rich 1 [Source:MGI Symbol;Acc:MGI:2442985]
21. Bsg ENSMUSG00000023175 7960 0.836 - 0.836 - - - - basigin [Source:MGI Symbol;Acc:MGI:88208]
22. Gstm2 ENSMUSG00000040562 3736 0.834 - 0.834 - - - - glutathione S-transferase, mu 2 [Source:MGI Symbol;Acc:MGI:95861]
23. Atf2 ENSMUSG00000027104 8295 0.831 - 0.831 - - - - activating transcription factor 2 [Source:MGI Symbol;Acc:MGI:109349]
24. Pnp ENSMUSG00000115338 3740 0.83 - 0.830 - - - - purine-nucleoside phosphorylase [Source:MGI Symbol;Acc:MGI:97365]
25. Ap1g1 ENSMUSG00000031731 3851 0.829 - 0.829 - - - - adaptor protein complex AP-1, gamma 1 subunit [Source:MGI Symbol;Acc:MGI:101919]
26. Zfp266 ENSMUSG00000060510 4296 0.829 - 0.829 - - - - zinc finger protein 266 [Source:MGI Symbol;Acc:MGI:1924769]
27. Tpst1 ENSMUSG00000034118 1510 0.827 - 0.827 - - - - protein-tyrosine sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1298231]
28. Gm4987 ENSMUSG00000063816 2295 0.827 - 0.827 - - - - predicted gene 4987 [Source:MGI Symbol;Acc:MGI:3647751]
29. Lpl ENSMUSG00000015568 3009 0.825 - 0.825 - - - - lipoprotein lipase [Source:MGI Symbol;Acc:MGI:96820]
30. Mnd1 ENSMUSG00000033752 1750 0.825 - 0.825 - - - - meiotic nuclear divisions 1 [Source:MGI Symbol;Acc:MGI:1924165]
31. Rtel1 ENSMUSG00000038685 930 0.823 - 0.823 - - - - regulator of telomere elongation helicase 1 [Source:MGI Symbol;Acc:MGI:2139369]
32. Ctdsp1 ENSMUSG00000026176 1758 0.822 - 0.822 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:MGI Symbol;Acc:MGI:2654470]
33. Srp68 ENSMUSG00000020780 3887 0.816 - 0.816 - - - - signal recognition particle 68 [Source:MGI Symbol;Acc:MGI:1917447]
34. Tprkb ENSMUSG00000054226 1485 0.816 - 0.816 - - - - Tp53rk binding protein [Source:MGI Symbol;Acc:MGI:1917036]
35. Vti1b ENSMUSG00000021124 1308 0.816 - 0.816 - - - - vesicle transport through interaction with t-SNAREs 1B [Source:MGI Symbol;Acc:MGI:1855688]
36. Gps2 ENSMUSG00000023170 10416 0.815 - 0.815 - - - - G protein pathway suppressor 2 [Source:MGI Symbol;Acc:MGI:1891751]
37. Yme1l1 ENSMUSG00000026775 4400 0.815 - 0.815 - - - - YME1-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1351651]
38. Mapk8 ENSMUSG00000021936 3875 0.814 - 0.814 - - - - mitogen-activated protein kinase 8 [Source:MGI Symbol;Acc:MGI:1346861]
39. Pcsk7 ENSMUSG00000035382 1328 0.814 - 0.814 - - - - proprotein convertase subtilisin/kexin type 7 [Source:MGI Symbol;Acc:MGI:107421]
40. Aif1l ENSMUSG00000001864 1602 0.814 - 0.814 - - - - allograft inflammatory factor 1-like [Source:MGI Symbol;Acc:MGI:1919598]
41. Trim56 ENSMUSG00000043279 682 0.813 - 0.813 - - - - tripartite motif-containing 56 [Source:MGI Symbol;Acc:MGI:2685298]
42. Tmem107 ENSMUSG00000020895 490 0.812 - 0.812 - - - - transmembrane protein 107 [Source:MGI Symbol;Acc:MGI:1914160]
43. Tpd52l1 ENSMUSG00000000296 786 0.812 - 0.812 - - - - tumor protein D52-like 1 [Source:MGI Symbol;Acc:MGI:1298386]
44. Rhog ENSMUSG00000073982 3130 0.812 - 0.812 - - - - ras homolog family member G [Source:MGI Symbol;Acc:MGI:1928370]
45. Nhlrc2 ENSMUSG00000025078 1180 0.811 - 0.811 - - - - NHL repeat containing 2 [Source:MGI Symbol;Acc:MGI:1914116]
46. Fbl ENSMUSG00000046865 3764 0.811 - 0.811 - - - - fibrillarin [Source:MGI Symbol;Acc:MGI:95486]
47. Gm6788 ENSMUSG00000090737 3096 0.811 - 0.811 - - - - predicted gene 6788 [Source:MGI Symbol;Acc:MGI:3646480]
48. Gm4631 ENSMUSG00000078899 2827 0.81 - 0.810 - - - - predicted gene 4631 [Source:MGI Symbol;Acc:MGI:3782813]
49. Ccdc114 ENSMUSG00000040189 1200 0.81 - 0.810 - - - - coiled-coil domain containing 114 [Source:MGI Symbol;Acc:MGI:2446120]
50. Vps33a ENSMUSG00000029434 711 0.809 - 0.809 - - - - VPS33A CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1924823]
51. Atp6v1g1 ENSMUSG00000039105 9352 0.808 - 0.808 - - - - ATPase, H+ transporting, lysosomal V1 subunit G1 [Source:MGI Symbol;Acc:MGI:1913540]
52. Mlxip ENSMUSG00000038342 1323 0.807 - 0.807 - - - - MLX interacting protein [Source:MGI Symbol;Acc:MGI:2141183]
53. Ankhd1 ENSMUSG00000024483 2807 0.807 - 0.807 - - - - ankyrin repeat and KH domain containing 1 [Source:MGI Symbol;Acc:MGI:1921733]
54. Brms1l ENSMUSG00000012076 1022 0.806 - 0.806 - - - - breast cancer metastasis-suppressor 1-like [Source:MGI Symbol;Acc:MGI:1196337]
55. Ccnb1 ENSMUSG00000041431 10096 0.806 - 0.806 - - - - cyclin B1 [Source:MGI Symbol;Acc:MGI:88302]
56. Ptpra ENSMUSG00000027303 1976 0.806 - 0.806 - - - - protein tyrosine phosphatase, receptor type, A [Source:MGI Symbol;Acc:MGI:97808]
57. Clcn5 ENSMUSG00000004317 3166 0.806 - 0.806 - - - - chloride channel, voltage-sensitive 5 [Source:MGI Symbol;Acc:MGI:99486]
58. Ccdc14 ENSMUSG00000022833 847 0.806 - 0.806 - - - - coiled-coil domain containing 14 [Source:MGI Symbol;Acc:MGI:2443448]
59. Tanc2 ENSMUSG00000053580 1154 0.805 - 0.805 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [Source:MGI Symbol;Acc:MGI:2444121]
60. Dus3l ENSMUSG00000007603 1071 0.805 - 0.805 - - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2147092]
61. Fbxl3 ENSMUSG00000022124 1375 0.805 - 0.805 - - - - F-box and leucine-rich repeat protein 3 [Source:MGI Symbol;Acc:MGI:1354702]
62. Sft2d3 ENSMUSG00000044982 847 0.804 - 0.804 - - - - SFT2 domain containing 3 [Source:MGI Symbol;Acc:MGI:1914408]
63. Itprip 468 0.803 - 0.803 - - - - inositol 1,4,5-triphosphate receptor interacting protein, transcript variant X2
64. Cacna1h ENSMUSG00000024112 564 0.803 - 0.803 - - - - calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:MGI Symbol;Acc:MGI:1928842]
65. Bend4 ENSMUSG00000092060 885 0.802 - 0.802 - - - - BEN domain containing 4 [Source:MGI Symbol;Acc:MGI:3648414]
66. Rbmxl1 ENSMUSG00000037070 8147 0.802 - 0.802 - - - - RNA binding motif protein, X-linked like-1 [Source:MGI Symbol;Acc:MGI:1343045]
67. Pms2 ENSMUSG00000079109 883 0.802 - 0.802 - - - - PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]
68. Cfp ENSMUSG00000001128 267 0.802 - 0.802 - - - - complement factor properdin [Source:MGI Symbol;Acc:MGI:97545]
69. Snca ENSMUSG00000025889 420 0.802 - 0.802 - - - - synuclein, alpha [Source:MGI Symbol;Acc:MGI:1277151]
70. Rab10 ENSMUSG00000020671 8126 0.801 0.801 - - - - - RAB10, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105066]
71. Katnal2 ENSMUSG00000025420 261 0.801 - 0.801 - - - - katanin p60 subunit A-like 2 [Source:MGI Symbol;Acc:MGI:1924234]
72. Maf ENSMUSG00000055435 2645 0.801 0.801 - - - - - avian musculoaponeurotic fibrosarcoma oncogene homolog [Source:MGI Symbol;Acc:MGI:96909]
73. Ppapdc1b Ppapdc1b 807 0.801 - 0.801 - - - -
74. Tlr3 ENSMUSG00000031639 152 0.801 - 0.801 - - - - toll-like receptor 3 [Source:MGI Symbol;Acc:MGI:2156367]
75. Foxj2 ENSMUSG00000003154 307 0.801 - 0.801 - - - - forkhead box J2 [Source:MGI Symbol;Acc:MGI:1926805]
76. Zfp202 ENSMUSG00000025602 368 0.801 - 0.801 - - - - zinc finger protein 202 [Source:MGI Symbol;Acc:MGI:1933401]
77. Ppp1r9b ENSMUSG00000038976 4099 0.801 - 0.801 - - - - protein phosphatase 1, regulatory subunit 9B [Source:MGI Symbol;Acc:MGI:2387581]
78. Endov ENSMUSG00000039850 3015 0.801 - 0.801 - - - - endonuclease V [Source:MGI Symbol;Acc:MGI:2444688]
79. Jak1 ENSMUSG00000028530 5491 0.8 0.800 - - - - - Janus kinase 1 [Source:MGI Symbol;Acc:MGI:96628]
80. Hmg20b ENSMUSG00000020232 3154 0.8 - 0.800 - - - - high mobility group 20B [Source:MGI Symbol;Acc:MGI:1341190]
81. Nelfcd ENSMUSG00000016253 3196 0.8 0.800 - - - - - negative elongation factor complex member C/D, Th1l [Source:MGI Symbol;Acc:MGI:1926424]
82. Scn8a ENSMUSG00000023033 445 0.8 - 0.800 - - - - sodium channel, voltage-gated, type VIII, alpha [Source:MGI Symbol;Acc:MGI:103169]
83. Sh3bgrl3 ENSMUSG00000028843 8054 0.799 - 0.799 - - - - SH3 domain binding glutamic acid-rich protein-like 3 [Source:MGI Symbol;Acc:MGI:1920973]
84. Gm25190 ENSMUSG00000093404 417 0.799 - 0.799 - - - - predicted gene, 25190 [Source:MGI Symbol;Acc:MGI:5454967]
85. Nrip1 ENSMUSG00000048490 4367 0.799 - 0.799 - - - - nuclear receptor interacting protein 1 [Source:MGI Symbol;Acc:MGI:1315213]
86. Ppm1a ENSMUSG00000021096 4278 0.799 - 0.799 - - - - protein phosphatase 1A, magnesium dependent, alpha isoform [Source:MGI Symbol;Acc:MGI:99878]
87. Sec24b ENSMUSG00000001052 1508 0.799 - 0.799 - - - - Sec24 related gene family, member B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2139764]
88. Gyk Gyk 394 0.799 - 0.799 - - - -
89. Crebbp ENSMUSG00000022521 2160 0.798 - 0.798 - - - - CREB binding protein [Source:MGI Symbol;Acc:MGI:1098280]
90. Morc2a ENSMUSG00000034543 2388 0.798 0.798 - - - - - microrchidia 2A [Source:MGI Symbol;Acc:MGI:1921772]
91. Aldh7a1 ENSMUSG00000053644 2773 0.797 0.797 - - - - - aldehyde dehydrogenase family 7, member A1 [Source:MGI Symbol;Acc:MGI:108186]
92. Lamp2 ENSMUSG00000016534 3440 0.797 - 0.797 - - - - lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
93. Kcnq5 ENSMUSG00000028033 573 0.797 - 0.797 - - - - potassium voltage-gated channel, subfamily Q, member 5 [Source:MGI Symbol;Acc:MGI:1924937]
94. Tmem230 ENSMUSG00000027341 995 0.797 - 0.797 - - - - transmembrane protein 230 [Source:MGI Symbol;Acc:MGI:1917862]
95. Nup155 ENSMUSG00000022142 3484 0.797 - 0.797 - - - - nucleoporin 155 [Source:MGI Symbol;Acc:MGI:2181182]
96. Bcar3 ENSMUSG00000028121 1174 0.797 - 0.797 - - - - breast cancer anti-estrogen resistance 3 [Source:MGI Symbol;Acc:MGI:1352501]
97. Gne ENSMUSG00000028479 439 0.797 - 0.797 - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:MGI Symbol;Acc:MGI:1354951]
98. Foxo1 ENSMUSG00000044167 1926 0.796 - 0.796 - - - - forkhead box O1 [Source:MGI Symbol;Acc:MGI:1890077]
99. Ift46 ENSMUSG00000002031 2247 0.796 - 0.796 - - - - intraflagellar transport 46 [Source:MGI Symbol;Acc:MGI:1923818]
100. Osbpl1a ENSMUSG00000044252 1204 0.796 - 0.796 - - - - oxysterol binding protein-like 1A [Source:MGI Symbol;Acc:MGI:1927551]

There are 188 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA