Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Spsb4

Gene Name Gene ID Reads Annotation
Spsb4 ENSMUSG00000046997 5432 splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]







Genes with expression patterns similar to Spsb4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Spsb4 ENSMUSG00000046997 5432 6 1.000 1.000 1.000 1.000 1.000 1.000 splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
2. Elavl3 ENSMUSG00000003410 2830 2.933 0.725 - 0.745 0.757 - 0.706 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
3. Trp53i11 ENSMUSG00000068735 15944 2.293 0.791 - 0.757 0.745 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
4. Gpr98 Gpr98 1797 2.249 0.747 - 0.768 0.734 - -
5. Nhlh1 ENSMUSG00000051251 2017 2.213 0.734 - 0.714 0.765 - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
6. Phf21b ENSMUSG00000016624 849 2.204 0.707 - 0.795 0.702 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
7. Psat1 ENSMUSG00000024640 15774 1.641 0.876 - 0.765 - - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
8. Hbb-bt ENSMUSG00000073940 12887 1.613 0.778 0.835 - - - - hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
9. Hes6 ENSMUSG00000067071 1692 1.613 0.756 - 0.857 - - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
10. Hoxc9 ENSMUSG00000036139 4145 1.594 0.801 - 0.793 - - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
11. Ckb ENSMUSG00000001270 8443 1.557 0.771 - 0.786 - - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
12. Srgap3 ENSMUSG00000030257 2941 1.544 0.797 - 0.747 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
13. Tubb3 ENSMUSG00000062380 9211 1.542 0.751 - - 0.791 - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
14. Cotl1 ENSMUSG00000031827 4560 1.526 0.804 - 0.722 - - - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
15. Crabp2 ENSMUSG00000004885 6976 1.524 - - 0.751 0.773 - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
16. Celsr2 ENSMUSG00000068740 2010 1.498 - 0.741 0.757 - - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
17. 2610017I09Rik 2610017I09Rik 1595 1.497 0.769 - - - 0.728 -
18. Fez1 ENSMUSG00000032118 2537 1.489 - - - 0.769 0.720 - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
19. Tubb2b ENSMUSG00000045136 41060 1.486 - - 0.759 0.727 - - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
20. Dpysl5 ENSMUSG00000029168 2096 1.485 0.783 - - 0.702 - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
21. Rgma ENSMUSG00000070509 1952 1.484 0.762 - 0.722 - - - repulsive guidance molecule family member A [Source:MGI Symbol;Acc:MGI:2679262]
22. Gng3 ENSMUSG00000071658 2104 1.482 - 0.743 - 0.739 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
23. Msi1 ENSMUSG00000054256 13785 1.473 - - 0.768 0.705 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
24. Trim9 ENSMUSG00000021071 870 1.453 0.707 - 0.746 - - - tripartite motif-containing 9 [Source:MGI Symbol;Acc:MGI:2137354]
25. Nrarp ENSMUSG00000078202 1708 1.453 0.752 - - 0.701 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
26. Rtn1 ENSMUSG00000021087 2547 1.435 0.711 - - 0.724 - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
27. Apba2 ENSMUSG00000030519 840 1.43 0.714 - - - 0.716 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
28. Rhbdl3 ENSMUSG00000017692 783 1.425 0.705 - 0.720 - - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
29. Tagln3 ENSMUSG00000022658 6054 1.424 - - 0.717 0.707 - - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
30. Soga3 ENSMUSG00000038916 3972 1.421 - - - 0.706 0.715 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
31. Afg3l2 ENSMUSG00000024527 3339 0.9 - 0.900 - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
32. Ccdc50 ENSMUSG00000038127 6532 0.888 - 0.888 - - - - coiled-coil domain containing 50 [Source:MGI Symbol;Acc:MGI:1914751]
33. Cnep1r1 ENSMUSG00000036810 2112 0.885 - 0.885 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:MGI Symbol;Acc:MGI:1921981]
34. Larp1 ENSMUSG00000037331 9214 0.851 - 0.851 - - - - La ribonucleoprotein domain family, member 1 [Source:MGI Symbol;Acc:MGI:1890165]
35. Nes ENSMUSG00000004891 8017 0.83 - - 0.830 - - - nestin [Source:MGI Symbol;Acc:MGI:101784]
36. Srsf2 ENSMUSG00000034120 1325 0.818 - 0.818 - - - - serine/arginine-rich splicing factor 2 [Source:MGI Symbol;Acc:MGI:98284]
37. Arf4 ENSMUSG00000021877, ENSMUSG00000115861 8580 0.814 - 0.814 - - - - ADP-ribosylation factor 4 [Source:MGI Symbol;Acc:MGI:99433]
38. Cdk13 ENSMUSG00000041297 2946 0.809 - 0.809 - - - - cyclin-dependent kinase 13 [Source:MGI Symbol;Acc:MGI:1916812]
39. Trim37 ENSMUSG00000018548 2097 0.808 - 0.808 - - - - tripartite motif-containing 37 [Source:MGI Symbol;Acc:MGI:2153072]
40. Bbip1 ENSMUSG00000084957 1639 0.806 - 0.806 - - - - BBSome interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913610]
41. Hsbp1 ENSMUSG00000031839 4341 0.806 - 0.806 - - - - heat shock factor binding protein 1 [Source:MGI Symbol;Acc:MGI:1915446]
42. Nrep ENSMUSG00000042834 16031 0.806 - - 0.806 - - - neuronal regeneration related protein [Source:MGI Symbol;Acc:MGI:99444]
43. Gtf2h5 ENSMUSG00000034345 6035 0.805 - 0.805 - - - - general transcription factor IIH, polypeptide 5 [Source:MGI Symbol;Acc:MGI:107227]
44. Rpp21 ENSMUSG00000024446 626 0.801 - 0.801 - - - - ribonuclease P 21 subunit [Source:MGI Symbol;Acc:MGI:1914926]
45. Rcor2 ENSMUSG00000024968 1207 0.801 - - 0.801 - - - REST corepressor 2 [Source:MGI Symbol;Acc:MGI:1859854]
46. Gm9892 ENSMUSG00000052825 6048 0.8 - 0.800 - - - - predicted gene 9892 [Source:MGI Symbol;Acc:MGI:3701610]
47. Hba-a2 ENSMUSG00000069917 40461 0.8 0.800 - - - - - hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
48. Haus2 ENSMUSG00000027285 2541 0.799 - 0.799 - - - - HAUS augmin-like complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1913546]
49. Med11 ENSMUSG00000018923 1869 0.798 - 0.798 - - - - mediator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1913422]
50. Rnf165 ENSMUSG00000025427 2394 0.798 - - 0.798 - - - ring finger protein 165 [Source:MGI Symbol;Acc:MGI:2444521]
51. Rab40c ENSMUSG00000025730 829 0.798 - 0.798 - - - - Rab40C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2183454]
52. AI314180 1592 0.797 - 0.797 - - - - expressed sequence AI314180, transcript variant X5
53. Raly ENSMUSG00000027593 727 0.795 - 0.795 - - - - hnRNP-associated with lethal yellow [Source:MGI Symbol;Acc:MGI:97850]
54. Tspan14 ENSMUSG00000037824 1679 0.792 - 0.792 - - - - tetraspanin 14 [Source:MGI Symbol;Acc:MGI:1196325]
55. Zswim5 ENSMUSG00000033948 463 0.79 0.790 - - - - - zinc finger SWIM-type containing 5 [Source:MGI Symbol;Acc:MGI:1921714]
56. Hoxc6 ENSMUSG00000001661 9818 0.789 - - 0.789 - - - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
57. Mrpl2 ENSMUSG00000002767 1834 0.787 - 0.787 - - - - mitochondrial ribosomal protein L2 [Source:MGI Symbol;Acc:MGI:1351622]
58. Tlk2 ENSMUSG00000020694 2900 0.786 - 0.786 - - - - tousled-like kinase 2 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1346023]
59. Nhlh2 ENSMUSG00000048540 1310 0.785 - - - - 0.785 - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
60. Cdv3 ENSMUSG00000032803 17359 0.785 - 0.785 - - - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:MGI Symbol;Acc:MGI:2448759]
61. Dll3 ENSMUSG00000003436 1086 0.781 0.781 - - - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
62. Rif1 ENSMUSG00000036202 4921 0.779 - 0.779 - - - - replication timing regulatory factor 1 [Source:MGI Symbol;Acc:MGI:1098622]
63. Tsen34 ENSMUSG00000035585 8094 0.779 - 0.779 - - - - tRNA splicing endonuclease subunit 34 [Source:MGI Symbol;Acc:MGI:1913328]
64. Stag2 ENSMUSG00000025862 3862 0.779 - 0.779 - - - - stromal antigen 2 [Source:MGI Symbol;Acc:MGI:1098583]
65. Prmt5 ENSMUSG00000023110 3788 0.777 - 0.777 - - - - protein arginine N-methyltransferase 5 [Source:MGI Symbol;Acc:MGI:1351645]
66. Crmp1 ENSMUSG00000029121 3165 0.777 - - - 0.777 - - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
67. Hbb-bh1 ENSMUSG00000052217 55379 0.777 0.777 - - - - - hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
68. Gldc ENSMUSG00000024827 695 0.777 0.777 - - - - - glycine decarboxylase [Source:MGI Symbol;Acc:MGI:1341155]
69. Trpc4ap ENSMUSG00000038324 3417 0.775 - 0.775 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:MGI Symbol;Acc:MGI:1930751]
70. Zfhx4 ENSMUSG00000025255 6456 0.774 - 0.774 - - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
71. Zfp41 ENSMUSG00000047003 3975 0.772 - - 0.772 - - - zinc finger protein 41 [Source:MGI Symbol;Acc:MGI:99186]
72. 2010003O02Rik 2010003O02Rik 2896 0.772 - 0.772 - - - -
73. Clp1 ENSMUSG00000027079 3327 0.77 - 0.770 - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
74. Ap3b2 ENSMUSG00000062444 565 0.768 - - 0.768 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
75. Qars ENSMUSG00000032604 3794 0.768 - 0.768 - - - - glutaminyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1915851]
76. Gm12751 ENSMUSG00000062554 1377 0.767 - 0.767 - - - - predicted gene 12751 [Source:MGI Symbol;Acc:MGI:3651049]
77. Arfip1 ENSMUSG00000074513 7586 0.766 - 0.766 - - - - ADP-ribosylation factor interacting protein 1 [Source:MGI Symbol;Acc:MGI:1277120]
78. Map1b ENSMUSG00000052727 28977 0.765 - - - 0.765 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
79. Rfx4 ENSMUSG00000020037 455 0.764 - - 0.764 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
80. Tomm70a ENSMUSG00000022752 10176 0.764 - 0.764 - - - - translocase of outer mitochondrial membrane 70A [Source:MGI Symbol;Acc:MGI:106295]
81. Ebf1 ENSMUSG00000057098 3112 0.763 - - - 0.763 - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
82. Nova1 ENSMUSG00000021047 658 0.763 - - 0.763 - - - neuro-oncological ventral antigen 1 [Source:MGI Symbol;Acc:MGI:104297]
83. Vasp ENSMUSG00000030403 3283 0.763 - 0.763 - - - - vasodilator-stimulated phosphoprotein [Source:MGI Symbol;Acc:MGI:109268]
84. Ube2n ENSMUSG00000074781 5355 0.762 - 0.762 - - - - ubiquitin-conjugating enzyme E2N [Source:MGI Symbol;Acc:MGI:1934835]
85. Zfp280d ENSMUSG00000038535 4540 0.761 - 0.761 - - - - zinc finger protein 280D [Source:MGI Symbol;Acc:MGI:2384583]
86. 2610524H06Rik ENSMUSG00000092486 3935 0.761 - 0.761 - - - - RIKEN cDNA 2610524H06 gene [Source:MGI Symbol;Acc:MGI:2447819]
87. Gm3550 ENSMUSG00000078240 469 0.76 - 0.760 - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
88. Seh1l ENSMUSG00000079614 7707 0.759 - 0.759 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
89. Phyhipl ENSMUSG00000037747 636 0.758 - 0.758 - - - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
90. Elavl2 ENSMUSG00000008489 2109 0.757 0.757 - - - - - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
91. Zfp706 ENSMUSG00000062397 10503 0.757 - 0.757 - - - - zinc finger protein 706 [Source:MGI Symbol;Acc:MGI:1915286]
92. Lfng ENSMUSG00000029570 386 0.757 - 0.757 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095413]
93. Pax6 ENSMUSG00000027168 2751 0.755 - - - - 0.755 - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
94. Vezf1 ENSMUSG00000018377, ENSMUSG00000098546 6251 0.755 - 0.755 - - - - vascular endothelial zinc finger 1 [Source:MGI Symbol;Acc:MGI:1313291]
95. Tsga10 ENSMUSG00000060771 891 0.754 - 0.754 - - - - testis specific 10 [Source:MGI Symbol;Acc:MGI:2685063]
96. Lamtor4 ENSMUSG00000050552 1199 0.753 - 0.753 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:MGI Symbol;Acc:MGI:1913346]
97. Cct2 ENSMUSG00000034024 13966 0.753 - 0.753 - - - - chaperonin containing Tcp1, subunit 2 (beta) [Source:MGI Symbol;Acc:MGI:107186]
98. Dck ENSMUSG00000029366 2642 0.753 - 0.753 - - - - deoxycytidine kinase [Source:MGI Symbol;Acc:MGI:102726]
99. Cers6 ENSMUSG00000027035 1300 0.752 - 0.752 - - - - ceramide synthase 6 [Source:MGI Symbol;Acc:MGI:2442564]
100. Snip1 ENSMUSG00000050213 980 0.75 - 0.750 - - - - Smad nuclear interacting protein 1 [Source:MGI Symbol;Acc:MGI:2156003]

There are 167 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA