Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sox6

Gene Name Gene ID Reads Annotation
Sox6 ENSMUSG00000051910 1444 SRY (sex determining region Y)-box 6 [Source:MGI Symbol;Acc:MGI:98368]







Genes with expression patterns similar to Sox6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sox6 ENSMUSG00000051910 1444 6 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 6 [Source:MGI Symbol;Acc:MGI:98368]
2. Zic2 ENSMUSG00000061524 472 1.659 - - - - 0.856 0.803 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
3. Nudt11 ENSMUSG00000073295 757 1.556 - - - - 0.839 0.717 nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
4. Prpsap1 ENSMUSG00000015869 4275 1.524 0.738 - - - 0.786 - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:MGI Symbol;Acc:MGI:1915013]
5. Eps8l2 ENSMUSG00000025504 185 1.519 0.806 - - - - 0.713 EPS8-like 2 [Source:MGI Symbol;Acc:MGI:2138828]
6. Akr1b10 ENSMUSG00000061758 586 1.516 0.791 - - - - 0.725 aldo-keto reductase family 1, member B10 (aldose reductase) [Source:MGI Symbol;Acc:MGI:1915111]
7. Rchy1 ENSMUSG00000029397 1938 1.501 0.728 - - - - 0.773 ring finger and CHY zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1915348]
8. Ttl ENSMUSG00000027394 1029 1.474 0.757 0.717 - - - - tubulin tyrosine ligase [Source:MGI Symbol;Acc:MGI:1916987]
9. Mrps26 ENSMUSG00000037740 1834 1.472 - - - - 0.769 0.703 mitochondrial ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1333830]
10. Cenpe ENSMUSG00000045328 4221 1.423 0.709 - - - - 0.714 centromere protein E [Source:MGI Symbol;Acc:MGI:1098230]
11. Rhobtb1 ENSMUSG00000019944 739 0.958 0.958 - - - - - Rho-related BTB domain containing 1 [Source:MGI Symbol;Acc:MGI:1916538]
12. Tmem126a ENSMUSG00000030615 1577 0.933 0.933 - - - - - transmembrane protein 126A [Source:MGI Symbol;Acc:MGI:1913521]
13. Kifap3 ENSMUSG00000026585 2025 0.928 0.928 - - - - - kinesin-associated protein 3 [Source:MGI Symbol;Acc:MGI:107566]
14. Robo2 ENSMUSG00000052516 1177 0.924 0.924 - - - - - roundabout guidance receptor 2 [Source:MGI Symbol;Acc:MGI:1890110]
15. Hist1h1a ENSMUSG00000049539 193 0.922 0.922 - - - - - histone cluster 1, H1a [Source:MGI Symbol;Acc:MGI:1931523]
16. Gstcd ENSMUSG00000028018 708 0.914 0.914 - - - - - glutathione S-transferase, C-terminal domain containing [Source:MGI Symbol;Acc:MGI:1914803]
17. Sostdc1 ENSMUSG00000036169 375 0.912 - - - - 0.912 - sclerostin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913292]
18. Dnajc10 ENSMUSG00000027006 3973 0.909 0.909 - - - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:MGI Symbol;Acc:MGI:1914111]
19. Exoc2 ENSMUSG00000021357 2139 0.9 0.900 - - - - - exocyst complex component 2 [Source:MGI Symbol;Acc:MGI:1913732]
20. Chchd6 ENSMUSG00000030086 835 0.9 - - - - 0.900 - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:MGI Symbol;Acc:MGI:1913348]
21. Dcaf10 ENSMUSG00000035572 1868 0.9 0.900 - - - - - DDB1 and CUL4 associated factor 10 [Source:MGI Symbol;Acc:MGI:2140179]
22. Reep1 ENSMUSG00000052852 1394 0.896 0.896 - - - - - receptor accessory protein 1 [Source:MGI Symbol;Acc:MGI:1098827]
23. Zfp870 ENSMUSG00000095325 544 0.884 - - - - 0.884 - zinc finger protein 870 [Source:MGI Symbol;Acc:MGI:3029586]
24. Gm5117 ENSMUSG00000093862 197 0.883 - - - - 0.883 - predicted gene 5117 [Source:MGI Symbol;Acc:MGI:3648041]
25. Jam2 ENSMUSG00000053062 1020 0.883 - - - - 0.883 - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
26. Cdc25c ENSMUSG00000044201 1273 0.876 - - - - 0.876 - cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
27. Klf4 ENSMUSG00000003032 309 0.872 - - - - 0.872 - Kruppel-like factor 4 (gut) [Source:MGI Symbol;Acc:MGI:1342287]
28. Xpo5 ENSMUSG00000067150 682 0.871 - - - - - 0.871 exportin 5 [Source:MGI Symbol;Acc:MGI:1913789]
29. Rasa1 ENSMUSG00000021549 3402 0.869 - - - - 0.869 - RAS p21 protein activator 1 [Source:MGI Symbol;Acc:MGI:97860]
30. Chrna4 ENSMUSG00000027577 941 0.868 - - - - 0.868 - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
31. Dclre1a ENSMUSG00000025077 675 0.868 - - - - 0.868 - DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]
32. Zswim1 ENSMUSG00000017764 460 0.867 - - - - 0.867 - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
33. Nabp2 ENSMUSG00000025374 4703 0.867 0.867 - - - - - nucleic acid binding protein 2 [Source:MGI Symbol;Acc:MGI:1917167]
34. Bcap29 ENSMUSG00000020650 559 0.865 - - - - 0.865 - B cell receptor associated protein 29 [Source:MGI Symbol;Acc:MGI:101917]
35. Gm5909 ENSMUSG00000082491 1029 0.864 - - - - 0.864 - predicted gene 5909 [Source:MGI Symbol;Acc:MGI:3646686]
36. Faim ENSMUSG00000032463 3379 0.863 - - - - 0.863 - Fas apoptotic inhibitory molecule [Source:MGI Symbol;Acc:MGI:1344387]
37. D030055H07Rik ENSMUSG00000086296 161 0.863 - - - - 0.863 - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
38. Nup98 ENSMUSG00000063550 482 0.863 - - - - 0.863 - nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]
39. Limk1 ENSMUSG00000029674 625 0.863 - - - - 0.863 - LIM-domain containing, protein kinase [Source:MGI Symbol;Acc:MGI:104572]
40. Gm4799 ENSMUSG00000071151 808 0.862 - - - - 0.862 - predicted gene 4799 [Source:MGI Symbol;Acc:MGI:3648850]
41. Il18bp ENSMUSG00000070427 230 0.861 - - - - 0.861 - interleukin 18 binding protein [Source:MGI Symbol;Acc:MGI:1333800]
42. Ep300 ENSMUSG00000055024 1623 0.861 0.861 - - - - - E1A binding protein p300 [Source:MGI Symbol;Acc:MGI:1276116]
43. Tecpr1 ENSMUSG00000066621 1296 0.861 0.861 - - - - - tectonin beta-propeller repeat containing 1 [Source:MGI Symbol;Acc:MGI:1917631]
44. Ankrd42 ENSMUSG00000041343 120 0.86 - - - - 0.860 - ankyrin repeat domain 42 [Source:MGI Symbol;Acc:MGI:1921095]
45. Acsl4 ENSMUSG00000031278 1565 0.86 0.860 - - - - - acyl-CoA synthetase long-chain family member 4 [Source:MGI Symbol;Acc:MGI:1354713]
46. Uckl1 ENSMUSG00000089917 375 0.86 - - - - 0.860 - uridine-cytidine kinase 1-like 1 [Source:MGI Symbol;Acc:MGI:1915806]
47. Bbip1 ENSMUSG00000084957 1639 0.858 - - - - 0.858 - BBSome interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913610]
48. Gm11975 ENSMUSG00000084231 70 0.858 - - - - 0.858 - predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
49. Gm17414 Gm17414 131 0.858 - - - - 0.858 -
50. Gm13775 ENSMUSG00000081207 54 0.858 - - - - 0.858 - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
51. B130046B21Rik ENSMUSG00000097414 59 0.858 - - - - 0.858 - RIKEN cDNA B130046B21 gene [Source:MGI Symbol;Acc:MGI:3704458]
52. Hoxb1 ENSMUSG00000018973 357 0.857 - - - - 0.857 - homeobox B1 [Source:MGI Symbol;Acc:MGI:96182]
53. Tmem243 ENSMUSG00000079659 181 0.857 - - - - 0.857 - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
54. H2afj ENSMUSG00000060032 2159 0.856 - - - - 0.856 - H2A histone family, member J [Source:MGI Symbol;Acc:MGI:3606192]
55. Mycl ENSMUSG00000028654 904 0.856 - - - - 0.856 - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
56. Phkg1 ENSMUSG00000025537 65 0.856 - - - - 0.856 - phosphorylase kinase gamma 1 [Source:MGI Symbol;Acc:MGI:97579]
57. Mzf1 ENSMUSG00000030380 234 0.855 - - - - 0.855 - myeloid zinc finger 1 [Source:MGI Symbol;Acc:MGI:107457]
58. Zfp354a ENSMUSG00000020364 242 0.855 - - - - 0.855 - zinc finger protein 354A [Source:MGI Symbol;Acc:MGI:103172]
59. Gstt1 ENSMUSG00000001663 158 0.855 - - - - 0.855 - glutathione S-transferase, theta 1 [Source:MGI Symbol;Acc:MGI:107379]
60. Frg1 ENSMUSG00000031590 1255 0.854 - - - - 0.854 - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
61. Parp3 ENSMUSG00000023249 110 0.854 - - - - 0.854 - poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]
62. Skint8 ENSMUSG00000078599 109 0.854 - - - - 0.854 - selection and upkeep of intraepithelial T cells 8 [Source:MGI Symbol;Acc:MGI:3651523]
63. Gm8757 ENSMUSG00000084125 112 0.854 - - - - 0.854 - predicted gene 8757 [Source:MGI Symbol;Acc:MGI:3644342]
64. Skil ENSMUSG00000027660 2066 0.853 0.853 - - - - - SKI-like [Source:MGI Symbol;Acc:MGI:106203]
65. C030037D09Rik ENSMUSG00000087574 291 0.853 - - - - 0.853 - RIKEN cDNA C030037D09 gene [Source:MGI Symbol;Acc:MGI:1924865]
66. Rabggta ENSMUSG00000040472 395 0.853 - - - - 0.853 - Rab geranylgeranyl transferase, a subunit [Source:MGI Symbol;Acc:MGI:1860443]
67. Zfand3 ENSMUSG00000044477 2002 0.852 0.852 - - - - - zinc finger, AN1-type domain 3 [Source:MGI Symbol;Acc:MGI:1096572]
68. Snhg4 ENSMUSG00000097769 743 0.852 - - - - - 0.852 small nucleolar RNA host gene 4 [Source:MGI Symbol;Acc:MGI:4937091]
69. Zfp40 ENSMUSG00000002617 724 0.852 - - - - 0.852 - zinc finger protein 40 [Source:MGI Symbol;Acc:MGI:99185]
70. Abcg4 ENSMUSG00000032131 186 0.852 - - - - 0.852 - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
71. Fbxl19 ENSMUSG00000030811 233 0.852 - - - - 0.852 - F-box and leucine-rich repeat protein 19 [Source:MGI Symbol;Acc:MGI:3039600]
72. Mark4 ENSMUSG00000030397 335 0.852 - - - - 0.852 - MAP/microtubule affinity regulating kinase 4 [Source:MGI Symbol;Acc:MGI:1920955]
73. Gm9864 ENSMUSG00000052005 829 0.851 - - - - 0.851 - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
74. Robo3 ENSMUSG00000032128 389 0.85 - - - - 0.850 - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
75. Klhl12 ENSMUSG00000026455 1454 0.85 - - - - 0.850 - kelch-like 12 [Source:MGI Symbol;Acc:MGI:2385619]
76. Gid4 ENSMUSG00000018415 1652 0.85 - - - - 0.850 - GID complex subunit 4, VID24 homolog [Source:MGI Symbol;Acc:MGI:1914021]
77. Rpl35a ENSMUSG00000060636 411 0.849 - - - - 0.849 - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
78. 4933431E20Rik ENSMUSG00000086968 381 0.849 - - - - 0.849 - RIKEN cDNA 4933431E20 gene [Source:MGI Symbol;Acc:MGI:3584041]
79. Fgf13 ENSMUSG00000031137 365 0.848 - - - - 0.848 - fibroblast growth factor 13 [Source:MGI Symbol;Acc:MGI:109178]
80. Mogat2 ENSMUSG00000052396 579 0.848 - - - - - 0.848 monoacylglycerol O-acyltransferase 2 [Source:MGI Symbol;Acc:MGI:2663253]
81. Snapc5 ENSMUSG00000032398 433 0.848 - - - - 0.848 - small nuclear RNA activating complex, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1914282]
82. Alg2 ENSMUSG00000039740 4275 0.847 - - - - 0.847 - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:1914731]
83. Tpmt ENSMUSG00000021376 544 0.847 - - - - 0.847 - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
84. Rwdd4a ENSMUSG00000031568 1470 0.847 - - - - 0.847 - RWD domain containing 4A [Source:MGI Symbol;Acc:MGI:2681000]
85. Rassf7 ENSMUSG00000038618 391 0.846 - - - - 0.846 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [Source:MGI Symbol;Acc:MGI:1914235]
86. Atad2b ENSMUSG00000052812 434 0.846 - - - - 0.846 - ATPase family, AAA domain containing 2B [Source:MGI Symbol;Acc:MGI:2444798]
87. Jakmip2 ENSMUSG00000024502 742 0.846 - - - - 0.846 - janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
88. Cdc42bpa ENSMUSG00000026490 955 0.845 - - - - 0.845 - CDC42 binding protein kinase alpha [Source:MGI Symbol;Acc:MGI:2441841]
89. Ppm1e ENSMUSG00000046442 270 0.844 - - - - 0.844 - protein phosphatase 1E (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2444096]
90. Hspa4l ENSMUSG00000025757, ENSMUSG00000115951 1283 0.843 - - - - 0.843 - heat shock protein 4 like [Source:MGI Symbol;Acc:MGI:107422]
91. Zfp160 ENSMUSG00000067942 1222 0.842 - - - - 0.842 - zinc finger protein 160 [Source:MGI Symbol;Acc:MGI:108187]
92. Bai3 Bai3 552 0.842 - - - - 0.842 -
93. Slc25a14 ENSMUSG00000031105 506 0.841 - - - - 0.841 - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:MGI Symbol;Acc:MGI:1330823]
94. Srbd1 ENSMUSG00000024135 926 0.841 - - - - 0.841 - S1 RNA binding domain 1 [Source:MGI Symbol;Acc:MGI:1925836]
95. Dennd4c ENSMUSG00000038024 349 0.841 - - - - 0.841 - DENN/MADD domain containing 4C [Source:MGI Symbol;Acc:MGI:1914769]
96. Cdc25b ENSMUSG00000027330 1004 0.841 - - - - 0.841 - cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
97. Kpna6 ENSMUSG00000003731 1294 0.84 0.840 - - - - - karyopherin (importin) alpha 6 [Source:MGI Symbol;Acc:MGI:1100836]
98. Zfp536 ENSMUSG00000043456 869 0.839 - - - - 0.839 - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
99. Acap2 ENSMUSG00000049076 1853 0.839 - - - - 0.839 - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:MGI Symbol;Acc:MGI:1925868]
100. Bcat2 ENSMUSG00000030826 198 0.839 - - - - - 0.839 branched chain aminotransferase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1276534]

There are 609 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA