Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sox21

Gene Name Gene ID Reads Annotation
Sox21 ENSMUSG00000061517 464 SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]







Genes with expression patterns similar to Sox21

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sox21 ENSMUSG00000061517 464 6 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
2. Ednrb ENSMUSG00000022122 1909 3.022 0.732 0.739 0.846 0.705 - - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
3. Gpr98 Gpr98 1797 2.977 0.763 - 0.749 0.718 - 0.747
4. Sox1 ENSMUSG00000096014 349 2.947 0.727 0.754 - 0.716 - 0.750 SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
5. Fez1 ENSMUSG00000032118 2537 2.392 - 0.757 0.856 - - 0.779 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
6. Scube2 ENSMUSG00000007279 406 2.301 0.744 - 0.825 0.732 - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
7. Lect1 122 2.229 - - 0.736 0.740 - 0.753 leukocyte cell derived chemotaxin 1, transcript variant X3
8. Nckap5 ENSMUSG00000049690 542 2.216 - - - 0.744 0.716 0.756 NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
9. Chrna4 ENSMUSG00000027577 941 2.179 - 0.706 - - 0.768 0.705 cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
10. Insm1 ENSMUSG00000068154 480 1.694 - - - - 0.961 0.733 insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
11. Sox3 ENSMUSG00000045179 1137 1.627 0.861 - 0.766 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
12. Gbx2 ENSMUSG00000034486 478 1.525 - - - 0.782 - 0.743 gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
13. D030055H07Rik ENSMUSG00000086296 161 1.522 0.753 - - - 0.769 - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
14. Otp ENSMUSG00000021685 170 1.494 - - - 0.777 - 0.717 orthopedia homeobox [Source:MGI Symbol;Acc:MGI:99835]
15. Phyhipl ENSMUSG00000037747 636 1.491 - - 0.705 - - 0.786 phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
16. Tubb2b ENSMUSG00000045136 41060 1.456 - - 0.736 - - 0.720 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
17. Nrarp ENSMUSG00000078202 1708 1.455 0.700 - - 0.755 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
18. 2610034M16Rik 2610034M16Rik 71 1.45 0.740 - 0.710 - - -
19. Rfx4 ENSMUSG00000020037 455 1.449 - - 0.730 0.719 - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
20. Zic1 ENSMUSG00000032368 7734 1.427 - - 0.706 - - 0.721 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
21. Sox2 ENSMUSG00000074637 8409 1.421 - - 0.717 0.704 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
22. Thoc7 ENSMUSG00000053453 1165 0.962 - - - - 0.962 - THO complex 7 [Source:MGI Symbol;Acc:MGI:1913481]
23. Ncapg ENSMUSG00000015880 1727 0.949 - - - - 0.949 - non-SMC condensin I complex, subunit G [Source:MGI Symbol;Acc:MGI:1930197]
24. Fut8 ENSMUSG00000021065 1066 0.947 - - - - 0.947 - fucosyltransferase 8 [Source:MGI Symbol;Acc:MGI:1858901]
25. Plagl2 ENSMUSG00000051413 1876 0.927 - - - - 0.927 - pleiomorphic adenoma gene-like 2 [Source:MGI Symbol;Acc:MGI:1933165]
26. Prpf40a ENSMUSG00000061136 8476 0.919 - - - - 0.919 - pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]
27. Sec24b ENSMUSG00000001052 1508 0.918 - - - - 0.918 - Sec24 related gene family, member B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2139764]
28. Gnao1 ENSMUSG00000031748 866 0.915 - - - - 0.915 - guanine nucleotide binding protein, alpha O [Source:MGI Symbol;Acc:MGI:95775]
29. Btbd9 ENSMUSG00000062202 1289 0.915 - - - - 0.915 - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
30. Bdp1 ENSMUSG00000049658 1860 0.913 - - - - 0.913 - B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:MGI Symbol;Acc:MGI:1347077]
31. Rassf4 ENSMUSG00000042129 1399 0.91 - - - - 0.910 - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
32. Setd7 ENSMUSG00000037111 1899 0.907 - - - - 0.907 - SET domain containing (lysine methyltransferase) 7 [Source:MGI Symbol;Acc:MGI:1920501]
33. Nrbp1 ENSMUSG00000029148 2373 0.905 - - - - 0.905 - nuclear receptor binding protein 1 [Source:MGI Symbol;Acc:MGI:2183436]
34. Ttc21b ENSMUSG00000034848 584 0.904 - - - - 0.904 - tetratricopeptide repeat domain 21B [Source:MGI Symbol;Acc:MGI:1920918]
35. Ttf1 ENSMUSG00000026803 1251 0.902 - - - - 0.902 - transcription termination factor, RNA polymerase I [Source:MGI Symbol;Acc:MGI:105044]
36. Ndufaf4 ENSMUSG00000028261 2535 0.902 - - - - 0.902 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:MGI Symbol;Acc:MGI:1915743]
37. Slc31a1 ENSMUSG00000066150 1810 0.893 - - - - 0.893 - solute carrier family 31, member 1 [Source:MGI Symbol;Acc:MGI:1333843]
38. Hoxb5 ENSMUSG00000038700 2439 0.893 - - - - 0.893 - homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
39. Zfp512 ENSMUSG00000062761 1682 0.891 - - - - 0.891 - zinc finger protein 512 [Source:MGI Symbol;Acc:MGI:1917345]
40. Srpk1 ENSMUSG00000004865 5361 0.89 - - - - 0.890 - serine/arginine-rich protein specific kinase 1 [Source:MGI Symbol;Acc:MGI:106908]
41. Klf13 ENSMUSG00000052040 2813 0.889 - - - - 0.889 - Kruppel-like factor 13 [Source:MGI Symbol;Acc:MGI:1354948]
42. Efnb2 ENSMUSG00000001300 2217 0.888 - - - - 0.888 - ephrin B2 [Source:MGI Symbol;Acc:MGI:105097]
43. Sst ENSMUSG00000004366 517 0.887 0.887 - - - - - somatostatin [Source:MGI Symbol;Acc:MGI:98326]
44. Ext1 ENSMUSG00000061731 1991 0.886 - - - - 0.886 - exostoses (multiple) 1 [Source:MGI Symbol;Acc:MGI:894663]
45. Egln2 ENSMUSG00000058709 2852 0.886 - - - - 0.886 - egl-9 family hypoxia-inducible factor 2 [Source:MGI Symbol;Acc:MGI:1932287]
46. Alg3 ENSMUSG00000033809 1784 0.886 - - - - 0.886 - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:1098592]
47. Tmem106b ENSMUSG00000029571 1684 0.884 - - - - 0.884 - transmembrane protein 106B [Source:MGI Symbol;Acc:MGI:1919150]
48. Ints7 ENSMUSG00000037461 1790 0.884 - - - - 0.884 - integrator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1924315]
49. Fam83d ENSMUSG00000027654 1788 0.882 - - - - 0.882 - family with sequence similarity 83, member D [Source:MGI Symbol;Acc:MGI:1919128]
50. Nsd1 ENSMUSG00000021488 5913 0.878 - - - - 0.878 - nuclear receptor-binding SET-domain protein 1 [Source:MGI Symbol;Acc:MGI:1276545]
51. Rtn3 ENSMUSG00000024758 11055 0.876 - - - - 0.876 - reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
52. Col4a2 ENSMUSG00000031503 4375 0.871 - - - - 0.871 - collagen, type IV, alpha 2 [Source:MGI Symbol;Acc:MGI:88455]
53. Zfp395 ENSMUSG00000034522 1366 0.865 - - - - 0.865 - zinc finger protein 395 [Source:MGI Symbol;Acc:MGI:2682318]
54. Gm17615 Gm17615 2434 0.86 - - - - 0.860 -
55. Gtpbp1 ENSMUSG00000042535 4039 0.852 - - - - 0.852 - GTP binding protein 1 [Source:MGI Symbol;Acc:MGI:109443]
56. Stxbp4 ENSMUSG00000020546 2322 0.852 - - - - 0.852 - syntaxin binding protein 4 [Source:MGI Symbol;Acc:MGI:1342296]
57. Fam84b ENSMUSG00000072568 1349 0.85 - - - - 0.850 - family with sequence similarity 84, member B [Source:MGI Symbol;Acc:MGI:3026924]
58. Dync1li1 ENSMUSG00000032435 1980 0.849 - - - - 0.849 - dynein cytoplasmic 1 light intermediate chain 1 [Source:MGI Symbol;Acc:MGI:2135610]
59. Crabp2 ENSMUSG00000004885 6976 0.847 - - - - - 0.847 cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
60. Polr3k ENSMUSG00000038628 3029 0.844 - - - - 0.844 - polymerase (RNA) III (DNA directed) polypeptide K [Source:MGI Symbol;Acc:MGI:1914255]
61. Atp6v0a1 ENSMUSG00000019302 2869 0.841 - - - - 0.841 - ATPase, H+ transporting, lysosomal V0 subunit A1 [Source:MGI Symbol;Acc:MGI:103286]
62. Npas3 ENSMUSG00000021010 2049 0.841 - - - - 0.841 - neuronal PAS domain protein 3 [Source:MGI Symbol;Acc:MGI:1351610]
63. Zfp410 ENSMUSG00000042472 1959 0.841 - - - - 0.841 - zinc finger protein 410 [Source:MGI Symbol;Acc:MGI:1289280]
64. Ezh2 ENSMUSG00000029687 6327 0.839 - - - - 0.839 - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:MGI Symbol;Acc:MGI:107940]
65. Ppp6r1 ENSMUSG00000052296 3697 0.839 - - - - 0.839 - protein phosphatase 6, regulatory subunit 1 [Source:MGI Symbol;Acc:MGI:2442163]
66. Ssr2 ENSMUSG00000041355 4002 0.835 - - - - 0.835 - signal sequence receptor, beta [Source:MGI Symbol;Acc:MGI:1913506]
67. Zfp60 ENSMUSG00000037640 2806 0.834 - - - - 0.834 - zinc finger protein 60 [Source:MGI Symbol;Acc:MGI:99207]
68. Plk1 ENSMUSG00000030867 5444 0.831 - - - - 0.831 - polo like kinase 1 [Source:MGI Symbol;Acc:MGI:97621]
69. Neurod4 ENSMUSG00000048015 764 0.83 - - - - - 0.830 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
70. Sox10 ENSMUSG00000033006 4908 0.827 0.827 - - - - - SRY (sex determining region Y)-box 10 [Source:MGI Symbol;Acc:MGI:98358]
71. Hadhb ENSMUSG00000059447 4287 0.826 - - - - 0.826 - hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit [Source:MGI Symbol;Acc:MGI:2136381]
72. Cdk13 ENSMUSG00000041297 2946 0.824 - - - - 0.824 - cyclin-dependent kinase 13 [Source:MGI Symbol;Acc:MGI:1916812]
73. Ppm1l ENSMUSG00000027784 1067 0.823 - - - - 0.823 - protein phosphatase 1 (formerly 2C)-like [Source:MGI Symbol;Acc:MGI:2139740]
74. Wnt7b ENSMUSG00000022382 367 0.822 - - - - - 0.822 wingless-type MMTV integration site family, member 7B [Source:MGI Symbol;Acc:MGI:98962]
75. 2610017I09Rik 2610017I09Rik 1595 0.818 - - 0.818 - - -
76. U2surp ENSMUSG00000032407 7845 0.816 - - - - 0.816 - U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208]
77. Anapc4 ENSMUSG00000029176 2907 0.812 - - - - 0.812 - anaphase promoting complex subunit 4 [Source:MGI Symbol;Acc:MGI:1098673]
78. Nelfcd ENSMUSG00000016253 3196 0.81 - - - - 0.810 - negative elongation factor complex member C/D, Th1l [Source:MGI Symbol;Acc:MGI:1926424]
79. Crot ENSMUSG00000003623 2271 0.807 - - - - 0.807 - carnitine O-octanoyltransferase [Source:MGI Symbol;Acc:MGI:1921364]
80. N4bp1 ENSMUSG00000031652 1689 0.805 - - - - 0.805 - NEDD4 binding protein 1 [Source:MGI Symbol;Acc:MGI:2136825]
81. Pax7 ENSMUSG00000028736 356 0.8 - - 0.800 - - - paired box 7 [Source:MGI Symbol;Acc:MGI:97491]
82. Cyb5r3 ENSMUSG00000018042 5089 0.799 - - - - 0.799 - cytochrome b5 reductase 3 [Source:MGI Symbol;Acc:MGI:94893]
83. Foxb1 ENSMUSG00000059246 293 0.799 0.799 - - - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
84. Ttc3 ENSMUSG00000040785 15467 0.795 - - - - 0.795 - tetratricopeptide repeat domain 3 [Source:MGI Symbol;Acc:MGI:1276539]
85. Tmbim6 ENSMUSG00000023010 7081 0.794 - - - - 0.794 - transmembrane BAX inhibitor motif containing 6 [Source:MGI Symbol;Acc:MGI:99682]
86. Llgl1 ENSMUSG00000020536 4051 0.794 - - - - 0.794 - LLGL1 scribble cell polarity complex component [Source:MGI Symbol;Acc:MGI:102682]
87. Spag7 ENSMUSG00000018287 5499 0.79 - - - - 0.790 - sperm associated antigen 7 [Source:MGI Symbol;Acc:MGI:107380]
88. Gm15500 ENSMUSG00000086583 10556 0.788 - - - - 0.788 - predicted pseudogene 15500 [Source:MGI Symbol;Acc:MGI:3782947]
89. Abca9 ENSMUSG00000041797 80 0.788 0.788 - - - - - ATP-binding cassette, sub-family A (ABC1), member 9 [Source:MGI Symbol;Acc:MGI:2386796]
90. Serbp1 ENSMUSG00000036371 36987 0.788 - - - - 0.788 - serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
91. Nabp2 ENSMUSG00000025374 4703 0.783 - - - - 0.783 - nucleic acid binding protein 2 [Source:MGI Symbol;Acc:MGI:1917167]
92. Ppp2r2a ENSMUSG00000022052 5227 0.783 - - - - 0.783 - protein phosphatase 2, regulatory subunit B, alpha [Source:MGI Symbol;Acc:MGI:1919228]
93. 0610040B09Rik 0610040B09Rik 333 0.781 - - 0.781 - - -
94. Ptcd3 ENSMUSG00000063884 4633 0.781 - - - - 0.781 - pentatricopeptide repeat domain 3 [Source:MGI Symbol;Acc:MGI:1917206]
95. Myt1 ENSMUSG00000010505 661 0.78 - - - - - 0.780 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
96. Neurog1 ENSMUSG00000048904 327 0.78 - - - - - 0.780 neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
97. Cox7a2l ENSMUSG00000024248 6370 0.777 - - - - 0.777 - cytochrome c oxidase subunit 7A2 like [Source:MGI Symbol;Acc:MGI:106015]
98. Zcchc18 ENSMUSG00000031428 2572 0.776 - - - - 0.776 - zinc finger, CCHC domain containing 18 [Source:MGI Symbol;Acc:MGI:1914245]
99. Enc1 ENSMUSG00000041773 2185 0.775 - - 0.775 - - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
100. Sc4mol Sc4mol 7168 0.77 - - - - 0.770 -

There are 158 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA