Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Soga3

Gene Name Gene ID Reads Annotation
Soga3 ENSMUSG00000038916 3972 SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]







Genes with expression patterns similar to Soga3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Soga3 ENSMUSG00000038916 3972 6 1.000 1.000 1.000 1.000 1.000 1.000 SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
2. Tuba1a ENSMUSG00000072235 51129 3.475 - - 0.900 0.921 0.816 0.838 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
3. Tubb3 ENSMUSG00000062380 9211 3.441 - - 0.848 0.924 0.876 0.793 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
4. Ina ENSMUSG00000034336 3835 3.123 - - 0.860 0.720 0.740 0.803 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
5. Tubb2b ENSMUSG00000045136 41060 2.67 - - 0.881 0.915 0.874 - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
6. Elavl3 ENSMUSG00000003410 2830 2.634 - - 0.923 0.885 0.826 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
7. Rtn1 ENSMUSG00000021087 2547 2.631 - - 0.945 0.818 0.868 - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
8. Tagln3 ENSMUSG00000022658 6054 2.617 - - 0.857 0.917 0.843 - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
9. Myt1 ENSMUSG00000010505 661 2.608 - - 0.871 0.868 0.869 - myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
10. Dpysl5 ENSMUSG00000029168 2096 2.582 - - 0.871 0.846 0.865 - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
11. Elavl4 ENSMUSG00000028546 6084 2.57 - - 0.854 0.841 0.875 - ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
12. Apba2 ENSMUSG00000030519 840 2.533 - - 0.872 0.771 0.890 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
13. Mapk8ip2 ENSMUSG00000022619 910 2.532 - - 0.807 0.859 0.866 - mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
14. Dcx ENSMUSG00000031285 1733 2.519 - - 0.875 0.758 0.886 - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
15. Nhlh2 ENSMUSG00000048540 1310 2.515 - - 0.832 0.825 0.858 - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
16. Fez1 ENSMUSG00000032118 2537 2.511 - - 0.770 0.851 0.890 - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
17. Stmn2 ENSMUSG00000027500 6200 2.491 - - 0.899 0.775 0.817 - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
18. 2610017I09Rik 2610017I09Rik 1595 2.455 - - 0.710 0.859 0.886 -
19. Trp53i11 ENSMUSG00000068735 15944 2.45 - - 0.862 0.881 - 0.707 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
20. Nrarp ENSMUSG00000078202 1708 2.438 - - 0.804 0.817 0.817 - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
21. Cadps ENSMUSG00000054423 870 2.436 - - 0.788 0.790 0.858 - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
22. Rhbdl3 ENSMUSG00000017692 783 2.435 - - 0.832 0.796 0.807 - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
23. Ncan ENSMUSG00000002341 521 2.427 - - 0.804 0.820 0.803 - neurocan [Source:MGI Symbol;Acc:MGI:104694]
24. Map1b ENSMUSG00000052727 28977 2.415 - - 0.762 0.914 0.739 - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
25. Stmn3 ENSMUSG00000027581 1327 2.414 - - 0.800 0.807 0.807 - stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
26. Gm3764 ENSMUSG00000097156 474 2.412 - - 0.720 0.840 0.852 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
27. St18 ENSMUSG00000033740 408 2.389 - - 0.797 0.759 0.833 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
28. Ap3b2 ENSMUSG00000062444 565 2.384 - - 0.795 0.781 0.808 - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
29. Crmp1 ENSMUSG00000029121 3165 2.374 - - 0.828 0.772 0.774 - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
30. Rufy3 ENSMUSG00000029291 695 2.365 - - 0.829 0.707 0.829 - RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
31. Mllt11 ENSMUSG00000053192 1776 2.357 - - 0.806 0.712 0.839 - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
32. Nsg2 ENSMUSG00000020297 1718 2.343 - - 0.780 0.752 0.811 - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
33. Scg3 ENSMUSG00000032181 445 2.333 - - 0.781 0.781 0.771 - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
34. Rundc3a ENSMUSG00000006575 421 2.328 - - 0.702 0.774 0.852 - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
35. Cdk5r1 ENSMUSG00000048895 2376 2.323 - - 0.727 0.772 0.824 - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
36. Nefl ENSMUSG00000022055 4031 2.318 - - 0.857 0.708 0.753 - neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
37. Dpysl3 ENSMUSG00000024501 7004 2.314 0.759 - - 0.771 0.784 - dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
38. Cadm1 ENSMUSG00000032076 15203 2.309 - - - 0.760 0.728 0.821 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
39. Pou3f3 ENSMUSG00000045515 5137 2.292 - - 0.747 0.805 0.740 - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
40. Sox2 ENSMUSG00000074637 8409 2.249 0.706 - - 0.826 0.717 - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
41. Sox2ot ENSMUSG00000105265 475 2.234 - - 0.773 0.719 0.742 - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
42. Gng3 ENSMUSG00000071658 2104 2.22 - - 0.745 0.771 0.704 - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
43. Syn1 ENSMUSG00000037217 289 2.212 - - 0.777 0.714 0.721 - synapsin I [Source:MGI Symbol;Acc:MGI:98460]
44. Miat ENSMUSG00000097767 4258 1.785 - 0.910 - 0.875 - - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
45. Srgap3 ENSMUSG00000030257 2941 1.667 - - 0.830 0.837 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
46. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 1.655 - - 0.785 0.870 - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
47. Neurod4 ENSMUSG00000048015 764 1.653 - - 0.808 0.845 - - neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
48. Uchl1 ENSMUSG00000029223 2803 1.65 - - 0.855 - 0.795 - ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
49. Nhlh1 ENSMUSG00000051251 2017 1.649 - - 0.834 0.815 - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
50. Map2 ENSMUSG00000015222 2576 1.649 - - 0.806 0.843 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
51. Nefm ENSMUSG00000022054 2534 1.645 - - 0.855 - 0.790 - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
52. Map6 ENSMUSG00000055407 476 1.642 - - - - 0.867 0.775 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
53. Ckb ENSMUSG00000001270 8443 1.63 - - 0.795 0.835 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
54. Basp1 ENSMUSG00000045763 22946 1.625 - - - 0.766 0.859 - brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
55. Ebf1 ENSMUSG00000057098 3112 1.625 - - - 0.854 0.771 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
56. Tox2 ENSMUSG00000074607 717 1.625 - 0.904 0.721 - - - TOX high mobility group box family member 2 [Source:MGI Symbol;Acc:MGI:3611233]
57. Btbd17 ENSMUSG00000000202 565 1.623 - - 0.836 - 0.787 - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
58. Spock2 ENSMUSG00000058297 1096 1.622 - - 0.769 - 0.853 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
59. Nmnat2 ENSMUSG00000042751 205 1.618 - - 0.850 - 0.768 - nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
60. Trim2 ENSMUSG00000027993 3587 1.608 - - - 0.859 0.749 - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
61. Nell2 ENSMUSG00000022454 870 1.604 - - 0.802 0.802 - - NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
62. Tmsb4x ENSMUSG00000049775 61014 1.594 - - - 0.812 0.782 - thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
63. Snrpn ENSMUSG00000102252 2727 1.589 - - 0.766 - 0.823 - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
64. Phf21b ENSMUSG00000016624 849 1.579 - - 0.724 0.855 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
65. Rtn3 ENSMUSG00000024758 11055 1.567 - - - 0.701 - 0.866 reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
66. Elavl2 ENSMUSG00000008489 2109 1.551 - - - 0.793 0.758 - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
67. Ttyh1 ENSMUSG00000030428 279 1.55 - - - 0.739 0.811 - tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
68. Snhg11 ENSMUSG00000044349 1353 1.544 - - - - 0.745 0.799 small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
69. Akap6 ENSMUSG00000061603 420 1.543 - - - 0.749 0.794 - A kinase (PRKA) anchor protein 6 [Source:MGI Symbol;Acc:MGI:3050566]
70. Hoxc9 ENSMUSG00000036139 4145 1.543 - - 0.759 0.784 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
71. Hoxc6 ENSMUSG00000001661 9818 1.538 - - - 0.779 0.759 - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
72. Celsr2 ENSMUSG00000068740 2010 1.534 - - 0.765 0.769 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
73. Scrt1 ENSMUSG00000048385 155 1.534 - - 0.798 - 0.736 - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
74. Nes ENSMUSG00000004891 8017 1.529 - - 0.777 0.752 - - nestin [Source:MGI Symbol;Acc:MGI:101784]
75. Dll3 ENSMUSG00000003436 1086 1.529 - - 0.815 0.714 - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
76. Nova2 ENSMUSG00000030411 400 1.527 - - 0.782 0.745 - - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
77. Pax6 ENSMUSG00000027168 2751 1.525 - - - 0.723 0.802 - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
78. Slc1a2 ENSMUSG00000005089 830 1.519 - - - 0.787 0.732 - solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
79. Cntn2 ENSMUSG00000053024 1798 1.516 - - 0.703 0.813 - - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
80. Prmt8 ENSMUSG00000030350 342 1.515 - - - 0.763 0.752 - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
81. Ndrg4 ENSMUSG00000036564 629 1.513 - - - - 0.748 0.765 N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
82. AI854517 AI854517 539 1.502 - - - 0.765 0.737 -
83. RP24-113D21.1 RP24-113D21.1 685 1.501 - - - 0.723 0.778 -
84. Npdc1 ENSMUSG00000015094 564 1.499 - - 0.766 - 0.733 - neural proliferation, differentiation and control 1 [Source:MGI Symbol;Acc:MGI:1099802]
85. Gap43 ENSMUSG00000047261 5946 1.493 - - 0.762 - 0.731 - growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
86. Rnf165 ENSMUSG00000025427 2394 1.49 - - 0.710 - 0.780 - ring finger protein 165 [Source:MGI Symbol;Acc:MGI:2444521]
87. Igsf8 ENSMUSG00000038034 9546 1.487 - - - 0.780 0.707 - immunoglobulin superfamily, member 8 [Source:MGI Symbol;Acc:MGI:2154090]
88. Apc2 ENSMUSG00000020135 328 1.483 - - - 0.722 0.761 - adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
89. Btg2 ENSMUSG00000020423 1222 1.478 - - - 0.725 0.753 - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
90. Actl6b ENSMUSG00000029712 203 1.472 - - - 0.713 0.759 - actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
91. Nrxn2 ENSMUSG00000033768, ENSMUSG00000107104 552 1.47 - - 0.710 - 0.760 - neurexin II [Source:MGI Symbol;Acc:MGI:1096362]
92. Dusp8 ENSMUSG00000037887 348 1.47 - - 0.725 - 0.745 - dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
93. Nrcam ENSMUSG00000020598 266 1.469 - - - 0.741 0.728 - neuronal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:104750]
94. Gdap1 ENSMUSG00000025777 166 1.462 - - 0.720 - 0.742 - ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
95. Gprin1 ENSMUSG00000069227 1013 1.46 - - 0.736 0.724 - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
96. Vim ENSMUSG00000026728 27519 1.46 - - - 0.720 - 0.740 vimentin [Source:MGI Symbol;Acc:MGI:98932]
97. Fabp7 ENSMUSG00000019874 3183 1.455 - - 0.712 0.743 - - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
98. Slco5a1 ENSMUSG00000025938 586 1.452 - - - - 0.703 0.749 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
99. Crabp2 ENSMUSG00000004885 6976 1.45 - - - 0.750 0.700 - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
100. Nfasc ENSMUSG00000026442 356 1.446 - - 0.704 - 0.742 - neurofascin [Source:MGI Symbol;Acc:MGI:104753]

There are 302 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA