Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Snrpe

Gene Name Gene ID Reads Annotation
Snrpe ENSMUSG00000090553 15996 small nuclear ribonucleoprotein E [Source:MGI Symbol;Acc:MGI:98346]







Genes with expression patterns similar to Snrpe

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Snrpe ENSMUSG00000090553 15996 6 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein E [Source:MGI Symbol;Acc:MGI:98346]
2. Mtf2 ENSMUSG00000029267 8936 1.495 0.758 - 0.737 - - - metal response element binding transcription factor 2 [Source:MGI Symbol;Acc:MGI:105050]
3. Rpl32 ENSMUSG00000057841 44996 1.435 0.727 - 0.708 - - - ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
4. Rps14 ENSMUSG00000024608 14551 0.876 - - 0.876 - - - ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:98107]
5. Chchd1 ENSMUSG00000063787 4326 0.852 - - 0.852 - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:MGI Symbol;Acc:MGI:1913371]
6. Mcl1 ENSMUSG00000038612 8258 0.849 0.849 - - - - - myeloid cell leukemia sequence 1 [Source:MGI Symbol;Acc:MGI:101769]
7. Rpl22l1 ENSMUSG00000039221 7371 0.826 - - 0.826 - - - ribosomal protein L22 like 1 [Source:MGI Symbol;Acc:MGI:1915278]
8. Nutf2 ENSMUSG00000008450 6609 0.819 0.819 - - - - - nuclear transport factor 2 [Source:MGI Symbol;Acc:MGI:1915301]
9. Lrrc17 ENSMUSG00000039883 11592 0.799 - - 0.799 - - - leucine rich repeat containing 17 [Source:MGI Symbol;Acc:MGI:1921761]
10. Gm5805 ENSMUSG00000061848 46054 0.799 - - 0.799 - - - predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
11. Kdm5c ENSMUSG00000025332 3846 0.796 0.796 - - - - - lysine (K)-specific demethylase 5C [Source:MGI Symbol;Acc:MGI:99781]
12. Mrpl42 ENSMUSG00000062981 4316 0.795 0.795 - - - - - mitochondrial ribosomal protein L42 [Source:MGI Symbol;Acc:MGI:1333774]
13. Zfhx4 ENSMUSG00000025255 6456 0.789 - - 0.789 - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
14. Rock1 ENSMUSG00000024290 4094 0.787 - - 0.787 - - - Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]
15. Ddx3x ENSMUSG00000000787 27968 0.786 - - 0.786 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
16. Cct3 ENSMUSG00000001416 12030 0.784 0.784 - - - - - chaperonin containing Tcp1, subunit 3 (gamma) [Source:MGI Symbol;Acc:MGI:104708]
17. Csde1 ENSMUSG00000068823 18265 0.783 - - 0.783 - - - cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
18. Hat1 ENSMUSG00000027018 4642 0.781 0.781 - - - - - histone aminotransferase 1 [Source:MGI Symbol;Acc:MGI:96013]
19. Ubqln2 ENSMUSG00000050148 5374 0.78 - - 0.780 - - - ubiquilin 2 [Source:MGI Symbol;Acc:MGI:1860283]
20. Siva1 ENSMUSG00000064326 3244 0.777 0.777 - - - - - SIVA1, apoptosis-inducing factor [Source:MGI Symbol;Acc:MGI:1353606]
21. Gm9769 12765 0.777 - - 0.777 - - - predicted pseudogene 9769
22. AI597468 AI597468 3278 0.776 - - 0.776 - - -
23. Pip5k1c ENSMUSG00000034902 3964 0.774 0.774 - - - - - phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma [Source:MGI Symbol;Acc:MGI:1298224]
24. Aldh7a1 ENSMUSG00000053644 2773 0.773 0.773 - - - - - aldehyde dehydrogenase family 7, member A1 [Source:MGI Symbol;Acc:MGI:108186]
25. Srf ENSMUSG00000015605 4253 0.773 0.773 - - - - - serum response factor [Source:MGI Symbol;Acc:MGI:106658]
26. Tmed2 ENSMUSG00000029390 7156 0.772 0.772 - - - - - transmembrane p24 trafficking protein 2 [Source:MGI Symbol;Acc:MGI:1929269]
27. Dbi ENSMUSG00000026385 8922 0.767 0.767 - - - - - diazepam binding inhibitor [Source:MGI Symbol;Acc:MGI:94865]
28. Vangl2 ENSMUSG00000026556 2575 0.765 0.765 - - - - - VANGL planar cell polarity 2 [Source:MGI Symbol;Acc:MGI:2135272]
29. Smarce1 ENSMUSG00000037935 8332 0.763 0.763 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:MGI Symbol;Acc:MGI:1927347]
30. Oat ENSMUSG00000030934 5221 0.762 0.762 - - - - - ornithine aminotransferase [Source:MGI Symbol;Acc:MGI:97394]
31. Gprasp1 ENSMUSG00000043384 7749 0.759 0.759 - - - - - G protein-coupled receptor associated sorting protein 1 [Source:MGI Symbol;Acc:MGI:1917418]
32. Ndufa2 ENSMUSG00000014294 8300 0.759 0.759 - - - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:MGI Symbol;Acc:MGI:1343103]
33. Sbno1 ENSMUSG00000038095 6522 0.759 0.759 - - - - - strawberry notch 1 [Source:MGI Symbol;Acc:MGI:2384298]
34. Rhobtb3 ENSMUSG00000021589 1986 0.758 0.758 - - - - - Rho-related BTB domain containing 3 [Source:MGI Symbol;Acc:MGI:1920546]
35. Rnmt ENSMUSG00000009535 3261 0.756 0.756 - - - - - RNA (guanine-7-) methyltransferase [Source:MGI Symbol;Acc:MGI:1915147]
36. Rbm14 ENSMUSG00000006456 3373 0.756 0.756 - - - - - RNA binding motif protein 14 [Source:MGI Symbol;Acc:MGI:1929092]
37. Rpl34 ENSMUSG00000062006 19944 0.755 - - 0.755 - - - ribosomal protein L34 [Source:MGI Symbol;Acc:MGI:1915686]
38. Rnf2 ENSMUSG00000026484 5321 0.755 0.755 - - - - - ring finger protein 2 [Source:MGI Symbol;Acc:MGI:1101759]
39. Ubr2 ENSMUSG00000023977 2216 0.754 0.754 - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:MGI Symbol;Acc:MGI:1861099]
40. Rpl39-ps ENSMUSG00000036305 39280 0.754 - - 0.754 - - - ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
41. Iws1 ENSMUSG00000024384 3779 0.754 0.754 - - - - - IWS1, SUPT6 interacting protein [Source:MGI Symbol;Acc:MGI:1920723]
42. Wdr82 ENSMUSG00000020257 5069 0.753 0.753 - - - - - WD repeat domain containing 82 [Source:MGI Symbol;Acc:MGI:1924555]
43. Eif3a ENSMUSG00000024991 13195 0.753 - - 0.753 - - - eukaryotic translation initiation factor 3, subunit A [Source:MGI Symbol;Acc:MGI:95301]
44. Npc2 ENSMUSG00000021242 6155 0.753 0.753 - - - - - NPC intracellular cholesterol transporter 2 [Source:MGI Symbol;Acc:MGI:1915213]
45. Psmb5 ENSMUSG00000022193 5587 0.75 0.750 - - - - - proteasome (prosome, macropain) subunit, beta type 5 [Source:MGI Symbol;Acc:MGI:1194513]
46. Zfp462 ENSMUSG00000060206 6068 0.749 - - 0.749 - - - zinc finger protein 462 [Source:MGI Symbol;Acc:MGI:107690]
47. Ikzf5 ENSMUSG00000040167 2156 0.749 - - 0.749 - - - IKAROS family zinc finger 5 [Source:MGI Symbol;Acc:MGI:1914393]
48. Myeov2 2702 0.748 - - 0.748 - - - myeloma overexpressed 2, transcript variant 2
49. Dnajc2 ENSMUSG00000029014 3781 0.746 0.746 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:MGI Symbol;Acc:MGI:99470]
50. Rpl37 ENSMUSG00000041841 44995 0.745 0.745 - - - - - ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
51. Usp5 ENSMUSG00000038429 6027 0.745 0.745 - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:MGI Symbol;Acc:MGI:1347343]
52. Eif4g2 ENSMUSG00000005610 83479 0.743 - - 0.743 - - - eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
53. Cdc42ep4 ENSMUSG00000041598 7243 0.743 0.743 - - - - - CDC42 effector protein (Rho GTPase binding) 4 [Source:MGI Symbol;Acc:MGI:1929760]
54. Tpm3 ENSMUSG00000027940 13474 0.741 0.741 - - - - - tropomyosin 3, gamma [Source:MGI Symbol;Acc:MGI:1890149]
55. Hcfc1 ENSMUSG00000031386 15036 0.74 - 0.740 - - - - host cell factor C1 [Source:MGI Symbol;Acc:MGI:105942]
56. Slc25a51 ENSMUSG00000045973 4292 0.738 0.738 - - - - - solute carrier family 25, member 51 [Source:MGI Symbol;Acc:MGI:2684984]
57. Baz2b ENSMUSG00000026987 6144 0.738 0.738 - - - - - bromodomain adjacent to zinc finger domain, 2B [Source:MGI Symbol;Acc:MGI:2442782]
58. Arih1 ENSMUSG00000025234 3800 0.738 - - 0.738 - - - ariadne RBR E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1344363]
59. Ylpm1 ENSMUSG00000021244 4313 0.736 0.736 - - - - - YLP motif containing 1 [Source:MGI Symbol;Acc:MGI:1926195]
60. Gm4617 ENSMUSG00000096544 16285 0.736 0.736 - - - - - predicted pseudogene 4617 [Source:MGI Symbol;Acc:MGI:3704225]
61. Qk ENSMUSG00000062078 10985 0.734 - - 0.734 - - - quaking [Source:MGI Symbol;Acc:MGI:97837]
62. Tpx2 ENSMUSG00000027469 5056 0.733 0.733 - - - - - TPX2, microtubule-associated [Source:MGI Symbol;Acc:MGI:1919369]
63. Cabin1 ENSMUSG00000020196 1482 0.732 0.732 - - - - - calcineurin binding protein 1 [Source:MGI Symbol;Acc:MGI:1298375]
64. Qars ENSMUSG00000032604 3794 0.732 0.732 - - - - - glutaminyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1915851]
65. Smpd4 ENSMUSG00000005899 2969 0.731 0.731 - - - - - sphingomyelin phosphodiesterase 4 [Source:MGI Symbol;Acc:MGI:1924876]
66. Scd1 ENSMUSG00000037071 1705 0.73 0.730 - - - - - stearoyl-Coenzyme A desaturase 1 [Source:MGI Symbol;Acc:MGI:98239]
67. Ostc ENSMUSG00000041084 9867 0.73 0.730 - - - - - oligosaccharyltransferase complex subunit (non-catalytic) [Source:MGI Symbol;Acc:MGI:1913607]
68. Chchd2 ENSMUSG00000070493 83335 0.729 - - 0.729 - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
69. C1d ENSMUSG00000000581 5054 0.729 - - 0.729 - - - C1D nuclear receptor co-repressor [Source:MGI Symbol;Acc:MGI:1927354]
70. Gm9846 Gm9846 21238 0.728 - 0.728 - - - -
71. Hic2 ENSMUSG00000050240 2857 0.727 0.727 - - - - - hypermethylated in cancer 2 [Source:MGI Symbol;Acc:MGI:1929869]
72. Fam135a ENSMUSG00000026153 2706 0.724 0.724 - - - - - family with sequence similarity 135, member A [Source:MGI Symbol;Acc:MGI:1915437]
73. Atad1 ENSMUSG00000013662 3979 0.724 0.724 - - - - - ATPase family, AAA domain containing 1 [Source:MGI Symbol;Acc:MGI:1915229]
74. Mrps17 ENSMUSG00000034211 2392 0.724 0.724 - - - - - mitochondrial ribosomal protein S17 [Source:MGI Symbol;Acc:MGI:1913508]
75. Tmx1 ENSMUSG00000021072 4673 0.722 0.722 - - - - - thioredoxin-related transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1919986]
76. Gtf3c4 ENSMUSG00000035666 2582 0.722 0.722 - - - - - general transcription factor IIIC, polypeptide 4 [Source:MGI Symbol;Acc:MGI:2138937]
77. 1110038B12Rik ENSMUSG00000092203 4278 0.722 0.722 - - - - - RIKEN cDNA 1110038B12 gene [Source:MGI Symbol;Acc:MGI:1916013]
78. H2afy ENSMUSG00000015937 24294 0.722 - 0.722 - - - - H2A histone family, member Y [Source:MGI Symbol;Acc:MGI:1349392]
79. Spg21 ENSMUSG00000032388 4418 0.72 0.720 - - - - - SPG21, maspardin [Source:MGI Symbol;Acc:MGI:106403]
80. Psmb3 ENSMUSG00000069744 3592 0.72 0.720 - - - - - proteasome (prosome, macropain) subunit, beta type 3 [Source:MGI Symbol;Acc:MGI:1347014]
81. Bmyc ENSMUSG00000049086 7563 0.72 0.720 - - - - - brain expressed myelocytomatosis oncogene [Source:MGI Symbol;Acc:MGI:88184]
82. Clcn4-2 Clcn4-2 3290 0.72 0.720 - - - - -
83. Usmg5 ENSMUSG00000071528 6916 0.72 - - 0.720 - - - upregulated during skeletal muscle growth 5 [Source:MGI Symbol;Acc:MGI:1891435]
84. Abhd17b ENSMUSG00000047368 6987 0.72 - - 0.720 - - - abhydrolase domain containing 17B [Source:MGI Symbol;Acc:MGI:1917816]
85. Wnk1 ENSMUSG00000045962 5216 0.719 0.719 - - - - - WNK lysine deficient protein kinase 1 [Source:MGI Symbol;Acc:MGI:2442092]
86. Kpna4 ENSMUSG00000027782 3679 0.718 0.718 - - - - - karyopherin (importin) alpha 4 [Source:MGI Symbol;Acc:MGI:1100848]
87. Trove2 ENSMUSG00000018199 10316 0.717 - - 0.717 - - - TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
88. Arl14ep ENSMUSG00000027122 1354 0.717 0.717 - - - - - ADP-ribosylation factor-like 14 effector protein [Source:MGI Symbol;Acc:MGI:1926020]
89. Akirin2 ENSMUSG00000028291 4706 0.716 0.716 - - - - - akirin 2 [Source:MGI Symbol;Acc:MGI:1889364]
90. Srsf3 ENSMUSG00000071172 39244 0.716 - - 0.716 - - - serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
91. Rps10-ps2 ENSMUSG00000099764 1798 0.715 0.715 - - - - - ribosomal protein S10, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3645627]
92. Prmt7 ENSMUSG00000060098 1358 0.715 0.715 - - - - - protein arginine N-methyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384879]
93. Tubb4b ENSMUSG00000036752 6429 0.714 0.714 - - - - - tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472]
94. Dek ENSMUSG00000021377 17329 0.714 - - 0.714 - - - DEK oncogene (DNA binding) [Source:MGI Symbol;Acc:MGI:1926209]
95. Tipin ENSMUSG00000032397 3539 0.712 0.712 - - - - - timeless interacting protein [Source:MGI Symbol;Acc:MGI:1921571]
96. Maf ENSMUSG00000055435 2645 0.712 0.712 - - - - - avian musculoaponeurotic fibrosarcoma oncogene homolog [Source:MGI Symbol;Acc:MGI:96909]
97. Yy1 ENSMUSG00000021264 5159 0.711 - - 0.711 - - - YY1 transcription factor [Source:MGI Symbol;Acc:MGI:99150]
98. Zfp618 ENSMUSG00000028358 8056 0.709 0.709 - - - - - zinc finger protein 618 [Source:MGI Symbol;Acc:MGI:1919950]
99. Sfpq ENSMUSG00000028820 29952 0.709 - 0.709 - - - - splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
100. Sub1 ENSMUSG00000022205 35827 0.709 - - 0.709 - - - SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]

There are 12 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA