Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Snrnp40

Gene Name Gene ID Reads Annotation
Snrnp40 ENSMUSG00000074088, ENSMUSG00000106911 4450 small nuclear ribonucleoprotein 40 (U5) [Source:MGI Symbol;Acc:MGI:1913835]







Genes with expression patterns similar to Snrnp40

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Snrnp40 ENSMUSG00000074088, ENSMUSG00000106911 4450 6 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein 40 (U5) [Source:MGI Symbol;Acc:MGI:1913835]
2. U2surp ENSMUSG00000032407 7845 0.843 - 0.843 - - - - U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208]
3. Tmx1 ENSMUSG00000021072 4673 0.825 - 0.825 - - - - thioredoxin-related transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1919986]
4. Golm1 ENSMUSG00000021556 4678 0.824 - 0.824 - - - - golgi membrane protein 1 [Source:MGI Symbol;Acc:MGI:1917329]
5. Zfp592 ENSMUSG00000005621 1111 0.82 - 0.820 - - - - zinc finger protein 592 [Source:MGI Symbol;Acc:MGI:2443541]
6. Mtmr12 ENSMUSG00000039458 952 0.819 - 0.819 - - - - myotubularin related protein 12 [Source:MGI Symbol;Acc:MGI:2443034]
7. Nmt2 ENSMUSG00000026643 1663 0.818 - 0.818 - - - - N-myristoyltransferase 2 [Source:MGI Symbol;Acc:MGI:1202298]
8. Smim11 ENSMUSG00000051989 1776 0.816 - 0.816 - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
9. Senp2 ENSMUSG00000022855 4436 0.81 - 0.810 - - - - SUMO/sentrin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1923076]
10. Slc30a9 ENSMUSG00000029221 1397 0.81 - 0.810 - - - - solute carrier family 30 (zinc transporter), member 9 [Source:MGI Symbol;Acc:MGI:1923690]
11. Fxn ENSMUSG00000059363 1187 0.809 - 0.809 - - - - frataxin [Source:MGI Symbol;Acc:MGI:1096879]
12. Ippk ENSMUSG00000021385 1122 0.808 - 0.808 - - - - inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Source:MGI Symbol;Acc:MGI:1922928]
13. Brip1 ENSMUSG00000034329 981 0.807 - 0.807 - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:MGI Symbol;Acc:MGI:2442836]
14. Rpp25l ENSMUSG00000036114 1760 0.806 - 0.806 - - - - ribonuclease P/MRP 25 subunit-like [Source:MGI Symbol;Acc:MGI:1917211]
15. Rab11a ENSMUSG00000004771 5656 0.804 - 0.804 - - - - RAB11A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858202]
16. Rfc1 ENSMUSG00000029191 4343 0.802 - 0.802 - - - - replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]
17. Arhgap11a ENSMUSG00000041219 1605 0.8 - 0.800 - - - - Rho GTPase activating protein 11A [Source:MGI Symbol;Acc:MGI:2444300]
18. Usp15 ENSMUSG00000020124 1069 0.8 - 0.800 - - - - ubiquitin specific peptidase 15 [Source:MGI Symbol;Acc:MGI:101857]
19. Cetn3 ENSMUSG00000021537 4363 0.799 - 0.799 - - - - centrin 3 [Source:MGI Symbol;Acc:MGI:1097706]
20. Nfxl1 ENSMUSG00000072889 1360 0.798 - 0.798 - - - - nuclear transcription factor, X-box binding-like 1 [Source:MGI Symbol;Acc:MGI:1923646]
21. Ubqln1 ENSMUSG00000005312 6279 0.798 - 0.798 - - - - ubiquilin 1 [Source:MGI Symbol;Acc:MGI:1860276]
22. Esf1 ENSMUSG00000045624 3534 0.797 - 0.797 - - - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:MGI Symbol;Acc:MGI:1913830]
23. Pcyt1a ENSMUSG00000005615 1406 0.794 - 0.794 - - - - phosphate cytidylyltransferase 1, choline, alpha isoform [Source:MGI Symbol;Acc:MGI:88557]
24. Mrpl40 ENSMUSG00000022706 1881 0.787 - 0.787 - - - - mitochondrial ribosomal protein L40 [Source:MGI Symbol;Acc:MGI:1332635]
25. Ift140 ENSMUSG00000024169 930 0.787 - 0.787 - - - - intraflagellar transport 140 [Source:MGI Symbol;Acc:MGI:2146906]
26. Gli2 ENSMUSG00000048402 1392 0.786 - 0.786 - - - - GLI-Kruppel family member GLI2 [Source:MGI Symbol;Acc:MGI:95728]
27. Tnfrsf21 ENSMUSG00000023915 924 0.786 - 0.786 - - - - tumor necrosis factor receptor superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2151075]
28. Slc25a17 ENSMUSG00000022404 2117 0.785 - 0.785 - - - - solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 [Source:MGI Symbol;Acc:MGI:1342248]
29. Fam193b ENSMUSG00000021495 1623 0.785 - 0.785 - - - - family with sequence similarity 193, member B [Source:MGI Symbol;Acc:MGI:2385851]
30. Numa1 ENSMUSG00000066306 1150 0.785 - 0.785 - - - - nuclear mitotic apparatus protein 1 [Source:MGI Symbol;Acc:MGI:2443665]
31. Espl1 ENSMUSG00000058290 1337 0.784 - 0.784 - - - - extra spindle pole bodies 1, separase [Source:MGI Symbol;Acc:MGI:2146156]
32. Cep250 ENSMUSG00000038241 1259 0.784 - 0.784 - - - - centrosomal protein 250 [Source:MGI Symbol;Acc:MGI:108084]
33. Brd8 ENSMUSG00000003778 4078 0.783 - 0.783 - - - - bromodomain containing 8 [Source:MGI Symbol;Acc:MGI:1925906]
34. Rbbp9 ENSMUSG00000027428 1700 0.782 - 0.782 - - - - retinoblastoma binding protein 9, serine hydrolase [Source:MGI Symbol;Acc:MGI:1347074]
35. Tbc1d17 ENSMUSG00000038520 1450 0.781 - 0.781 - - - - TBC1 domain family, member 17 [Source:MGI Symbol;Acc:MGI:2449973]
36. BC018242 BC018242 311 0.78 - 0.780 - - - -
37. Zfp7 ENSMUSG00000033669 763 0.78 - 0.780 - - - - zinc finger protein 7 [Source:MGI Symbol;Acc:MGI:99208]
38. Socs2 ENSMUSG00000020027 1214 0.779 - 0.779 - - - - suppressor of cytokine signaling 2 [Source:MGI Symbol;Acc:MGI:1201787]
39. Mad2l1 ENSMUSG00000029910 8504 0.779 - 0.779 - - - - MAD2 mitotic arrest deficient-like 1 [Source:MGI Symbol;Acc:MGI:1860374]
40. Tbpl1 ENSMUSG00000071359 2711 0.779 - 0.779 - - - - TATA box binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1339946]
41. St8sia1 ENSMUSG00000030283 920 0.777 - 0.777 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:MGI Symbol;Acc:MGI:106011]
42. Zfp385a ENSMUSG00000000552 2121 0.776 - 0.776 - - - - zinc finger protein 385A [Source:MGI Symbol;Acc:MGI:1352495]
43. D10Jhu81e ENSMUSG00000053329 634 0.776 - 0.776 - - - - DNA segment, Chr 10, Johns Hopkins University 81 expressed [Source:MGI Symbol;Acc:MGI:1351861]
44. Ppil3 ENSMUSG00000026035 745 0.775 - 0.775 - - - - peptidylprolyl isomerase (cyclophilin)-like 3 [Source:MGI Symbol;Acc:MGI:1917475]
45. Eif1a ENSMUSG00000057561 3520 0.775 - 0.775 - - - - eukaryotic translation initiation factor 1A [Source:MGI Symbol;Acc:MGI:95298]
46. Lmnb1 ENSMUSG00000024590 2867 0.775 - 0.775 - - - - lamin B1 [Source:MGI Symbol;Acc:MGI:96795]
47. Cd2bp2 ENSMUSG00000042502 2610 0.775 - 0.775 - - - - CD2 antigen (cytoplasmic tail) binding protein 2 [Source:MGI Symbol;Acc:MGI:1917483]
48. Wscd1 ENSMUSG00000020811 318 0.775 - 0.775 - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
49. Fra10ac1 ENSMUSG00000054237 851 0.774 - 0.774 - - - - FRA10AC1 homolog (human) [Source:MGI Symbol;Acc:MGI:1917817]
50. Ier5 ENSMUSG00000056708 1305 0.774 - 0.774 - - - - immediate early response 5 [Source:MGI Symbol;Acc:MGI:1337072]
51. Grpel1 ENSMUSG00000029198 2055 0.774 - 0.774 - - - - GrpE-like 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1334417]
52. Mir3091 ENSMUSG00000092827 755 0.774 - 0.774 - - - - microRNA 3091 [Source:MGI Symbol;Acc:MGI:4834305]
53. Arl16 ENSMUSG00000057594 663 0.774 - 0.774 - - - - ADP-ribosylation factor-like 16 [Source:MGI Symbol;Acc:MGI:1917567]
54. Raf1 ENSMUSG00000000441 2091 0.774 - 0.774 - - - - v-raf-leukemia viral oncogene 1 [Source:MGI Symbol;Acc:MGI:97847]
55. Srbd1 ENSMUSG00000024135 926 0.774 - 0.774 - - - - S1 RNA binding domain 1 [Source:MGI Symbol;Acc:MGI:1925836]
56. Dot1l ENSMUSG00000061589 2521 0.774 - 0.774 - - - - DOT1-like, histone H3 methyltransferase (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2143886]
57. Atat1 ENSMUSG00000024426 3567 0.773 - 0.773 - - - - alpha tubulin acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1913869]
58. Osbpl3 ENSMUSG00000029822 569 0.773 - 0.773 - - - - oxysterol binding protein-like 3 [Source:MGI Symbol;Acc:MGI:1918970]
59. Knstrn ENSMUSG00000027331 2318 0.772 - 0.772 - - - - kinetochore-localized astrin/SPAG5 binding [Source:MGI Symbol;Acc:MGI:1289298]
60. Ganab ENSMUSG00000071650 2991 0.772 - 0.772 - - - - alpha glucosidase 2 alpha neutral subunit [Source:MGI Symbol;Acc:MGI:1097667]
61. Tiam1 ENSMUSG00000002489 1001 0.771 - 0.771 - - - - T cell lymphoma invasion and metastasis 1 [Source:MGI Symbol;Acc:MGI:103306]
62. Whsc1 4228 0.771 - 0.771 - - - - Wolf-Hirschhorn syndrome candidate 1 (human), transcript variant X2
63. Ndufb10 ENSMUSG00000040048 1810 0.771 - 0.771 - - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:MGI Symbol;Acc:MGI:1915592]
64. Slc12a9 ENSMUSG00000037344 666 0.771 - 0.771 - - - - solute carrier family 12 (potassium/chloride transporters), member 9 [Source:MGI Symbol;Acc:MGI:1933532]
65. Ankle1 ENSMUSG00000046295 532 0.771 - 0.771 - - - - ankyrin repeat and LEM domain containing 1 [Source:MGI Symbol;Acc:MGI:1918775]
66. Kif1c ENSMUSG00000020821 1345 0.77 - 0.770 - - - - kinesin family member 1C [Source:MGI Symbol;Acc:MGI:1098260]
67. Prkag2 ENSMUSG00000028944 521 0.769 - 0.769 - - - - protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:1336153]
68. Rap2b ENSMUSG00000036894 3203 0.769 - 0.769 - - - - RAP2B, member of RAS oncogene family [Source:MGI Symbol;Acc:MGI:1921262]
69. Mrpl41 ENSMUSG00000036850 2477 0.768 - 0.768 - - - - mitochondrial ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1333816]
70. Smad1 ENSMUSG00000031681 1752 0.767 - 0.767 - - - - SMAD family member 1 [Source:MGI Symbol;Acc:MGI:109452]
71. Gpatch8 ENSMUSG00000034621 1682 0.766 - 0.766 - - - - G patch domain containing 8 [Source:MGI Symbol;Acc:MGI:1918667]
72. Dennd6b ENSMUSG00000015377 391 0.766 - 0.766 - - - - DENN/MADD domain containing 6B [Source:MGI Symbol;Acc:MGI:1916690]
73. Pcnt ENSMUSG00000001151 1517 0.766 - 0.766 - - - - pericentrin (kendrin) [Source:MGI Symbol;Acc:MGI:102722]
74. Hif3a ENSMUSG00000004328 436 0.765 - 0.765 - - - - hypoxia inducible factor 3, alpha subunit [Source:MGI Symbol;Acc:MGI:1859778]
75. Urgcp ENSMUSG00000049680 870 0.765 - 0.765 - - - - upregulator of cell proliferation [Source:MGI Symbol;Acc:MGI:1919296]
76. Afap1l1 ENSMUSG00000033032 472 0.765 - 0.765 - - - - actin filament associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2147199]
77. Stx5a ENSMUSG00000010110 2722 0.765 - 0.765 - - - - syntaxin 5A [Source:MGI Symbol;Acc:MGI:1928483]
78. Wdr70 ENSMUSG00000039828 1123 0.764 - 0.764 - - - - WD repeat domain 70 [Source:MGI Symbol;Acc:MGI:1921020]
79. Polr1e ENSMUSG00000028318 703 0.764 - 0.764 - - - - polymerase (RNA) I polypeptide E [Source:MGI Symbol;Acc:MGI:1929022]
80. Rpl22-ps1 ENSMUSG00000080877 368 0.763 - 0.763 - - - - ribosomal protein L22, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644276]
81. Fnip1 ENSMUSG00000035992 1355 0.763 - 0.763 - - - - folliculin interacting protein 1 [Source:MGI Symbol;Acc:MGI:2444668]
82. Prdm16 ENSMUSG00000039410 833 0.763 - 0.763 - - - - PR domain containing 16 [Source:MGI Symbol;Acc:MGI:1917923]
83. Dut ENSMUSG00000027203 11820 0.763 - 0.763 - - - - deoxyuridine triphosphatase [Source:MGI Symbol;Acc:MGI:1346051]
84. Ncs1 ENSMUSG00000062661 1121 0.763 - 0.763 - - - - neuronal calcium sensor 1 [Source:MGI Symbol;Acc:MGI:109166]
85. Zfp599 ENSMUSG00000062794 354 0.763 - 0.763 - - - - zinc finger protein 599 [Source:MGI Symbol;Acc:MGI:2679006]
86. Fbxo45 ENSMUSG00000035764 1458 0.762 - 0.762 - - - - F-box protein 45 [Source:MGI Symbol;Acc:MGI:2447775]
87. Ccne2 ENSMUSG00000028212 419 0.762 - 0.762 - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
88. Ppfibp1 ENSMUSG00000016487 1415 0.762 - 0.762 - - - - PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:MGI Symbol;Acc:MGI:1914783]
89. Prdm4 ENSMUSG00000035529 1371 0.762 - 0.762 - - - - PR domain containing 4 [Source:MGI Symbol;Acc:MGI:1920093]
90. Pex10 ENSMUSG00000029047 243 0.761 - 0.761 - - - - peroxisomal biogenesis factor 10 [Source:MGI Symbol;Acc:MGI:2684988]
91. Gm21781 ENSMUSG00000095123 261 0.761 - 0.761 - - - - predicted gene, 21781 [Source:MGI Symbol;Acc:MGI:5433945]
92. Bicd2 ENSMUSG00000037933 784 0.761 - 0.761 - - - - BICD cargo adaptor 2 [Source:MGI Symbol;Acc:MGI:1924145]
93. Tsc1 ENSMUSG00000026812 948 0.761 - 0.761 - - - - tuberous sclerosis 1 [Source:MGI Symbol;Acc:MGI:1929183]
94. 6820431F20Rik ENSMUSG00000071796 1045 0.761 - 0.761 - - - - RIKEN cDNA 6820431F20 gene [Source:MGI Symbol;Acc:MGI:3694236]
95. Rcn2 ENSMUSG00000032320 3186 0.76 - 0.760 - - - - reticulocalbin 2 [Source:MGI Symbol;Acc:MGI:1349765]
96. Slc7a14 ENSMUSG00000069072 717 0.76 - 0.760 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 [Source:MGI Symbol;Acc:MGI:3040688]
97. Ccdc120 ENSMUSG00000031150 486 0.76 - 0.760 - - - - coiled-coil domain containing 120 [Source:MGI Symbol;Acc:MGI:1859619]
98. Trim27 ENSMUSG00000021326 6617 0.76 0.760 - - - - - tripartite motif-containing 27 [Source:MGI Symbol;Acc:MGI:97904]
99. 1600012H06Rik ENSMUSG00000050088 1111 0.76 - 0.760 - - - - RIKEN cDNA 1600012H06 gene [Source:MGI Symbol;Acc:MGI:1915162]
100. Ubac1 ENSMUSG00000036352 2053 0.759 - 0.759 - - - - ubiquitin associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1920995]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA