Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Snhg9

Gene Name Gene ID Reads Annotation
Snhg9 ENSMUSG00000090101 136 small nucleolar RNA host gene 9 [Source:MGI Symbol;Acc:MGI:1920724]







Genes with expression patterns similar to Snhg9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Snhg9 ENSMUSG00000090101 136 6 1.000 1.000 1.000 1.000 1.000 1.000 small nucleolar RNA host gene 9 [Source:MGI Symbol;Acc:MGI:1920724]
2. Gna15 ENSMUSG00000034792 26 0.915 - - - 0.915 - - guanine nucleotide binding protein, alpha 15 [Source:MGI Symbol;Acc:MGI:95770]
3. C8b ENSMUSG00000029656 12 0.902 - - - 0.902 - - complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
4. Gm826 ENSMUSG00000074623 27 0.902 - - - 0.902 - - predicted gene 826 [Source:MGI Symbol;Acc:MGI:2685672]
5. Rgn ENSMUSG00000023070 86 0.896 - - - 0.896 - - regucalcin [Source:MGI Symbol;Acc:MGI:108024]
6. Hc ENSMUSG00000026874 12 0.896 - - - 0.896 - - hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
7. Gm4879 ENSMUSG00000048261 46 0.894 - - - 0.894 - - predicted pseudogene 4879 [Source:MGI Symbol;Acc:MGI:3648111]
8. Sla2 ENSMUSG00000027636 24 0.888 - - - 0.888 - - Src-like-adaptor 2 [Source:MGI Symbol;Acc:MGI:1925049]
9. Sh2d4a ENSMUSG00000053886 52 0.888 - - - 0.888 - - SH2 domain containing 4A [Source:MGI Symbol;Acc:MGI:1919531]
10. Lefty1 ENSMUSG00000038793 35 0.887 - - - 0.887 - - left right determination factor 1 [Source:MGI Symbol;Acc:MGI:107405]
11. Cfi ENSMUSG00000058952 17 0.882 - - - 0.882 - - complement component factor i [Source:MGI Symbol;Acc:MGI:105937]
12. Gdf15 ENSMUSG00000038508 10 0.881 - - - 0.881 - - growth differentiation factor 15 [Source:MGI Symbol;Acc:MGI:1346047]
13. Mar-01 Mar-01 28 0.881 - - - 0.881 - -
14. Vmn1r-ps68 ENSMUSG00000092359 27 0.881 - - - 0.881 - - vomeronasal 1 receptor, pseudogene 68 [Source:MGI Symbol;Acc:MGI:3852413]
15. Otoa ENSMUSG00000034990 11 0.881 - - - 0.881 - - otoancorin [Source:MGI Symbol;Acc:MGI:2149209]
16. A130051J06Rik ENSMUSG00000097643 24 0.881 - - - 0.881 - - RIKEN cDNA A130051J0 gene [Source:MGI Symbol;Acc:MGI:3642574]
17. Glipr1 ENSMUSG00000056888 12 0.881 - - - 0.881 - - GLI pathogenesis-related 1 (glioma) [Source:MGI Symbol;Acc:MGI:1920940]
18. Slc35d3 ENSMUSG00000050473 84 0.878 - - - 0.878 - - solute carrier family 35, member D3 [Source:MGI Symbol;Acc:MGI:1923407]
19. Tnfaip2 ENSMUSG00000021281 214 0.878 - - - 0.878 - - tumor necrosis factor, alpha-induced protein 2 [Source:MGI Symbol;Acc:MGI:104960]
20. Cbln3 ENSMUSG00000040380 51 0.877 - - - 0.877 - - cerebellin 3 precursor protein [Source:MGI Symbol;Acc:MGI:1889286]
21. Mapkapk3 ENSMUSG00000032577 124 0.877 - - - 0.877 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:MGI Symbol;Acc:MGI:2143163]
22. Slpi ENSMUSG00000017002 14 0.876 - - - 0.876 - - secretory leukocyte peptidase inhibitor [Source:MGI Symbol;Acc:MGI:109297]
23. Creb3l3 ENSMUSG00000035041 46 0.876 - - - 0.876 - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
24. Ccrl2 ENSMUSG00000043953 22 0.873 - - - 0.873 - - chemokine (C-C motif) receptor-like 2 [Source:MGI Symbol;Acc:MGI:1920904]
25. Siglec5 Siglec5 18 0.872 - - - 0.872 - -
26. Angptl3 ENSMUSG00000028553 11 0.872 - - - 0.872 - - angiopoietin-like 3 [Source:MGI Symbol;Acc:MGI:1353627]
27. Abcb4 ENSMUSG00000042476 26 0.872 - - - 0.872 - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:MGI Symbol;Acc:MGI:97569]
28. Abca8b ENSMUSG00000020620 54 0.871 - - - 0.871 - - ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
29. Gm1141 ENSMUSG00000073130 43 0.87 - - - 0.870 - - predicted gene 1141 [Source:MGI Symbol;Acc:MGI:2685987]
30. Gstm3 ENSMUSG00000004038 25 0.87 - - - 0.870 - - glutathione S-transferase, mu 3 [Source:MGI Symbol;Acc:MGI:106026]
31. Prg2 ENSMUSG00000027073 50 0.869 - - - 0.869 - - proteoglycan 2, bone marrow [Source:MGI Symbol;Acc:MGI:103294]
32. Gm10010 ENSMUSG00000056771 37 0.868 - - - 0.868 - - predicted gene 10010 [Source:MGI Symbol;Acc:MGI:3641978]
33. Clec4a1 ENSMUSG00000049037 53 0.866 - - - 0.866 - - C-type lectin domain family 4, member a1 [Source:MGI Symbol;Acc:MGI:3036291]
34. Arhgdig ENSMUSG00000073433 60 0.865 - - - 0.865 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:MGI Symbol;Acc:MGI:108430]
35. Ptx4 ENSMUSG00000044172 13 0.863 - - - 0.863 - - pentraxin 4 [Source:MGI Symbol;Acc:MGI:1915759]
36. Il1r2 ENSMUSG00000026073 26 0.862 - - - 0.862 - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
37. Rhox5 ENSMUSG00000095180, ENSMUSG00000097306 136 0.862 - - - 0.862 - - reproductive homeobox 5 [Source:MGI Symbol;Acc:MGI:97538]
38. F10 ENSMUSG00000031444 51 0.859 - - - 0.859 - - coagulation factor X [Source:MGI Symbol;Acc:MGI:103107]
39. Gm11868 ENSMUSG00000050550 36 0.857 - - - 0.857 - - predicted gene 11868 [Source:MGI Symbol;Acc:MGI:3650507]
40. Tfr2 ENSMUSG00000029716 51 0.857 - - - 0.857 - - transferrin receptor 2 [Source:MGI Symbol;Acc:MGI:1354956]
41. Lyz2 ENSMUSG00000069516 230 0.856 - - - 0.856 - - lysozyme 2 [Source:MGI Symbol;Acc:MGI:96897]
42. Atp1b2 ENSMUSG00000041329 647 0.855 - - - 0.855 - - ATPase, Na+/K+ transporting, beta 2 polypeptide [Source:MGI Symbol;Acc:MGI:88109]
43. Cxcl16 ENSMUSG00000018920 38 0.853 - - - 0.853 - - chemokine (C-X-C motif) ligand 16 [Source:MGI Symbol;Acc:MGI:1932682]
44. Slc39a8 ENSMUSG00000053897 431 0.85 - - - 0.850 - - solute carrier family 39 (metal ion transporter), member 8 [Source:MGI Symbol;Acc:MGI:1914797]
45. Gnaz ENSMUSG00000040009 721 0.849 - - - 0.849 - - guanine nucleotide binding protein, alpha z subunit [Source:MGI Symbol;Acc:MGI:95780]
46. Gm25835 ENSMUSG00000089542 30 0.847 - - - 0.847 - - predicted gene, 25835 [Source:MGI Symbol;Acc:MGI:5455612]
47. Ptprc ENSMUSG00000026395 57 0.846 - - - 0.846 - - protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
48. Mpeg1 ENSMUSG00000046805 63 0.842 - - - 0.842 - - macrophage expressed gene 1 [Source:MGI Symbol;Acc:MGI:1333743]
49. Gm8756 ENSMUSG00000098238 52 0.836 - - - 0.836 - - predicted gene 8756 [Source:MGI Symbol;Acc:MGI:3644333]
50. Cyp2c68 ENSMUSG00000074882 26 0.836 - - - 0.836 - - cytochrome P450, family 2, subfamily c, polypeptide 68 [Source:MGI Symbol;Acc:MGI:3612287]
51. Gm6153 ENSMUSG00000090994 31 0.834 - - - 0.834 - - predicted gene 6153 [Source:MGI Symbol;Acc:MGI:3645798]
52. Selplg ENSMUSG00000048163 40 0.833 - - - 0.833 - - selectin, platelet (p-selectin) ligand [Source:MGI Symbol;Acc:MGI:106689]
53. Rbm41 ENSMUSG00000031433 71 0.832 - - - 0.832 - - RNA binding motif protein 41 [Source:MGI Symbol;Acc:MGI:2444923]
54. Cldn13 ENSMUSG00000008843 25 0.832 - - - 0.832 - - claudin 13 [Source:MGI Symbol;Acc:MGI:1913102]
55. Neat1 ENSMUSG00000092274 205 0.831 - - - 0.831 - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
56. C1ra ENSMUSG00000055172 76 0.83 - - - 0.830 - - complement component 1, r subcomponent A [Source:MGI Symbol;Acc:MGI:1355313]
57. Kirrel3 ENSMUSG00000032036 42 0.828 - - - 0.828 - - kirre like nephrin family adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1914953]
58. Slc2a10 ENSMUSG00000027661 105 0.827 - - - 0.827 - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:MGI Symbol;Acc:MGI:2156687]
59. Slc22a3 ENSMUSG00000023828 78 0.827 - - - 0.827 - - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
60. H2-Q10 ENSMUSG00000067235 36 0.823 - - - 0.823 - - histocompatibility 2, Q region locus 10 [Source:MGI Symbol;Acc:MGI:95929]
61. Top1mt ENSMUSG00000000934 72 0.823 - - - 0.823 - - DNA topoisomerase 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1920210]
62. Bphl ENSMUSG00000038286 501 0.822 - - - 0.822 - - biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) [Source:MGI Symbol;Acc:MGI:1915271]
63. Sepsecs ENSMUSG00000029173 384 0.821 - - - 0.821 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:MGI Symbol;Acc:MGI:1098791]
64. Dram1 ENSMUSG00000020057 43 0.82 - - - 0.820 - - DNA-damage regulated autophagy modulator 1 [Source:MGI Symbol;Acc:MGI:1918962]
65. Shank3 ENSMUSG00000022623 139 0.82 - - - 0.820 - - SH3 and multiple ankyrin repeat domains 3 [Source:MGI Symbol;Acc:MGI:1930016]
66. Gm16416 ENSMUSG00000095940 68 0.817 - - - 0.817 - - predicted gene 16416 [Source:MGI Symbol;Acc:MGI:3646635]
67. Itga4 ENSMUSG00000027009 912 0.817 - - - 0.817 - - integrin alpha 4 [Source:MGI Symbol;Acc:MGI:96603]
68. Fga ENSMUSG00000028001 637 0.815 - - - 0.815 - - fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
69. Igsf1 ENSMUSG00000031111 123 0.815 - - - 0.815 - - immunoglobulin superfamily, member 1 [Source:MGI Symbol;Acc:MGI:2147913]
70. Ptpn7 ENSMUSG00000031506 126 0.814 - - - 0.814 - - protein tyrosine phosphatase, non-receptor type 7 [Source:MGI Symbol;Acc:MGI:2156893]
71. Cd36 ENSMUSG00000002944 142 0.813 - - - 0.813 - - CD36 molecule [Source:MGI Symbol;Acc:MGI:107899]
72. Tmem56 ENSMUSG00000028132 111 0.812 - - - 0.812 - - transmembrane protein 56 [Source:MGI Symbol;Acc:MGI:1923195]
73. Apoc1 ENSMUSG00000040564 43 0.811 - - - 0.811 - - apolipoprotein C-I [Source:MGI Symbol;Acc:MGI:88053]
74. Tapbp ENSMUSG00000024308 349 0.808 - - - 0.808 - - TAP binding protein [Source:MGI Symbol;Acc:MGI:1201689]
75. Gipc2 ENSMUSG00000039131 66 0.808 - - - 0.808 - - GIPC PDZ domain containing family, member 2 [Source:MGI Symbol;Acc:MGI:1889209]
76. Dock8 ENSMUSG00000052085 64 0.807 - - - 0.807 - - dedicator of cytokinesis 8 [Source:MGI Symbol;Acc:MGI:1921396]
77. Spta1 ENSMUSG00000026532 64 0.807 - - - 0.807 - - spectrin alpha, erythrocytic 1 [Source:MGI Symbol;Acc:MGI:98385]
78. Pnldc1 ENSMUSG00000073460 25 0.806 - - 0.806 - - - poly(A)-specific ribonuclease (PARN)-like domain containing 1 [Source:MGI Symbol;Acc:MGI:2685159]
79. Apobec3 ENSMUSG00000009585 138 0.805 - - - 0.805 - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]
80. 4921523L03Rik ENSMUSG00000093749 246 0.805 - - 0.805 - - - RIKEN cDNA 4921523L03 gene [Source:MGI Symbol;Acc:MGI:1918163]
81. Sec16b ENSMUSG00000026589 80 0.804 - - - 0.804 - - SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
82. Fgl2 ENSMUSG00000039899 55 0.804 - - - 0.804 - - fibrinogen-like protein 2 [Source:MGI Symbol;Acc:MGI:103266]
83. Parvg ENSMUSG00000022439 145 0.803 - - - 0.803 - - parvin, gamma [Source:MGI Symbol;Acc:MGI:2158329]
84. Serpina1a ENSMUSG00000066366 88 0.8 - - - 0.800 - - serine (or cysteine) peptidase inhibitor, clade A, member 1A [Source:MGI Symbol;Acc:MGI:891971]
85. Nmnat3 ENSMUSG00000032456 69 0.799 - - - 0.799 - - nicotinamide nucleotide adenylyltransferase 3 [Source:MGI Symbol;Acc:MGI:1921330]
86. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.799 - - - 0.799 - - predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
87. C1qc ENSMUSG00000036896 325 0.799 - - - 0.799 - - complement component 1, q subcomponent, C chain [Source:MGI Symbol;Acc:MGI:88225]
88. Hps6 ENSMUSG00000074811 74 0.796 - - - 0.796 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
89. Milr1 ENSMUSG00000040528 46 0.793 - - - 0.793 - - mast cell immunoglobulin like receptor 1 [Source:MGI Symbol;Acc:MGI:2685731]
90. Serpina1d ENSMUSG00000071177 146 0.793 - - - 0.793 - - serine (or cysteine) peptidase inhibitor, clade A, member 1D [Source:MGI Symbol;Acc:MGI:891968]
91. Sgsh ENSMUSG00000005043 196 0.792 - - - 0.792 - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:MGI Symbol;Acc:MGI:1350341]
92. Abhd14b ENSMUSG00000042073 300 0.791 - - - 0.791 - - abhydrolase domain containing 14b [Source:MGI Symbol;Acc:MGI:1923741]
93. Prkcd ENSMUSG00000021948 898 0.791 - - - 0.791 - - protein kinase C, delta [Source:MGI Symbol;Acc:MGI:97598]
94. Zfp687 ENSMUSG00000019338 583 0.786 - - - 0.786 - - zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
95. Iah1 ENSMUSG00000062054 750 0.785 - - - 0.785 - - isoamyl acetate-hydrolyzing esterase 1 homolog [Source:MGI Symbol;Acc:MGI:1914982]
96. Celsr1 ENSMUSG00000016028 500 0.781 - - 0.781 - - - cadherin, EGF LAG seven-pass G-type receptor 1 [Source:MGI Symbol;Acc:MGI:1100883]
97. Rnmtl1 333 0.781 - - - 0.781 - - RNA methyltransferase like 1, transcript variant X1
98. Gtf2h3 ENSMUSG00000029387 661 0.777 - - - 0.777 - - general transcription factor IIH, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1277143]
99. Bin2 ENSMUSG00000098112 317 0.777 - - - 0.777 - - bridging integrator 2 [Source:MGI Symbol;Acc:MGI:3611448]
100. Cntnap2 ENSMUSG00000039419 230 0.77 - - 0.770 - - - contactin associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1914047]

There are 116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA