Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Snhg3

Gene Name Gene ID Reads Annotation
Snhg3 ENSMUSG00000085241 17 small nucleolar RNA host gene 3 [Source:MGI Symbol;Acc:MGI:2684817]







Genes with expression patterns similar to Snhg3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Snhg3 ENSMUSG00000085241 17 6 1.000 1.000 1.000 1.000 1.000 1.000 small nucleolar RNA host gene 3 [Source:MGI Symbol;Acc:MGI:2684817]
2. Gm16340 Gm16340 3 1.861 - - - 1.000 - 0.861
3. Gm13550 ENSMUSG00000084250 5 1.76 0.760 - - 1.000 - - predicted gene 13550 [Source:MGI Symbol;Acc:MGI:3651031]
4. Gm7488 ENSMUSG00000039617 15 1.739 - 1.000 - - - 0.739 predicted gene 7488 [Source:MGI Symbol;Acc:MGI:3647006]
5. Gm2415 ENSMUSG00000086119 5 1.641 0.859 - - 0.782 - - predicted gene 2415 [Source:MGI Symbol;Acc:MGI:3780582]
6. Slc16a11 ENSMUSG00000040938 5 1.553 0.831 - - - 0.722 - solute carrier family 16 (monocarboxylic acid transporters), member 11 [Source:MGI Symbol;Acc:MGI:2663709]
7. Dsc3 ENSMUSG00000059898 10 1 - 1.000 - - - - desmocollin 3 [Source:MGI Symbol;Acc:MGI:1194993]
8. Gm14690 Gm14690 2 1 - - - 1.000 - -
9. Ntn5 ENSMUSG00000070564 22 1 - - - 1.000 - - netrin 5 [Source:MGI Symbol;Acc:MGI:2685330]
10. Gm26671 ENSMUSG00000097339 2 1 - - - 1.000 - - predicted gene, 26671 [Source:MGI Symbol;Acc:MGI:5477165]
11. Olfr359-ps1 ENSMUSG00000081737 1 1 - 1.000 - - - - olfactory receptor 359, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3030193]
12. Dapl1 ENSMUSG00000026989 10 1 - - - - - 1.000 death associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1923997]
13. Glyat ENSMUSG00000063683 4 1 - - - 1.000 - - glycine-N-acyltransferase [Source:MGI Symbol;Acc:MGI:2147502]
14. Poln ENSMUSG00000045102 11 1 - 1.000 - - - - DNA polymerase N [Source:MGI Symbol;Acc:MGI:2675617]
15. Acsm2 ENSMUSG00000030945 31 1 - - - 1.000 - - acyl-CoA synthetase medium-chain family member 2 [Source:MGI Symbol;Acc:MGI:2385289]
16. Mir3098 ENSMUSG00000093157 3 1 - - - 1.000 - - microRNA 3098 [Source:MGI Symbol;Acc:MGI:4834313]
17. H2-DMb1 ENSMUSG00000079547 2 1 - - - 1.000 - - histocompatibility 2, class II, locus Mb1 [Source:MGI Symbol;Acc:MGI:95922]
18. Ptger1 ENSMUSG00000019464 5 1 - - - 1.000 - - prostaglandin E receptor 1 (subtype EP1) [Source:MGI Symbol;Acc:MGI:97793]
19. Hesx1 ENSMUSG00000040726 13 1 - 1.000 - - - - homeobox gene expressed in ES cells [Source:MGI Symbol;Acc:MGI:96071]
20. Clrn1 ENSMUSG00000043850 2 1 - - - 1.000 - - clarin 1 [Source:MGI Symbol;Acc:MGI:2388124]
21. Gm22661 ENSMUSG00000077380 11 1 - - - 1.000 - - predicted gene, 22661 [Source:MGI Symbol;Acc:MGI:5452438]
22. Gm16049 Gm16049 3 1 - - - 1.000 - -
23. A330048O09Rik ENSMUSG00000097326 31 1 - 1.000 - - - - RIKEN cDNA A330048O09 gene [Source:MGI Symbol;Acc:MGI:2443792]
24. Gm12703 ENSMUSG00000052767 2 1 - - - 1.000 - - predicted gene 12703 [Source:MGI Symbol;Acc:MGI:3650667]
25. Gm9956 Gm9956 9 1 - 1.000 - - - -
26. Gm12026 ENSMUSG00000082737 1 1 - 1.000 - - - - predicted gene 12026 [Source:MGI Symbol;Acc:MGI:3651190]
27. Gm20386 ENSMUSG00000092603 9 1 - 1.000 - - - - predicted gene 20386 [Source:MGI Symbol;Acc:MGI:5141851]
28. Nrg2 ENSMUSG00000060275 16 1 - - - 1.000 - - neuregulin 2 [Source:MGI Symbol;Acc:MGI:1098246]
29. Gm12022 ENSMUSG00000085675 13 1 - - - 1.000 - - predicted gene 12022 [Source:MGI Symbol;Acc:MGI:3650976]
30. Mical1 ENSMUSG00000019823 14 1 - - - 1.000 - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
31. Dhrs9 ENSMUSG00000027068 3 1 - 1.000 - - - - dehydrogenase/reductase (SDR family) member 9 [Source:MGI Symbol;Acc:MGI:2442798]
32. Tmem181b-ps ENSMUSG00000096780 8 1 - - - 1.000 - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
33. 4732414G09Rik ENSMUSG00000086943 8 1 - - - 1.000 - - RIKEN cDNA 4732414G09 gene [Source:MGI Symbol;Acc:MGI:3045381]
34. Slc17a4 ENSMUSG00000021336 10 1 - - - 1.000 - - solute carrier family 17 (sodium phosphate), member 4 [Source:MGI Symbol;Acc:MGI:2442850]
35. Pdzd3 ENSMUSG00000032105 1 1 - - - 1.000 - - PDZ domain containing 3 [Source:MGI Symbol;Acc:MGI:2429554]
36. Tlr8 ENSMUSG00000040522 1 1 - - - 1.000 - - toll-like receptor 8 [Source:MGI Symbol;Acc:MGI:2176887]
37. Cacna1i ENSMUSG00000022416 8 1 - - - 1.000 - - calcium channel, voltage-dependent, alpha 1I subunit [Source:MGI Symbol;Acc:MGI:2178051]
38. Tpbpb ENSMUSG00000062705 1 1 - - - 1.000 - - trophoblast specific protein beta [Source:MGI Symbol;Acc:MGI:2151721]
39. Pkhd1 ENSMUSG00000043760 14 1 - 1.000 - - - - polycystic kidney and hepatic disease 1 [Source:MGI Symbol;Acc:MGI:2155808]
40. Clec5a ENSMUSG00000029915 6 1 - - - 1.000 - - C-type lectin domain family 5, member a [Source:MGI Symbol;Acc:MGI:1345151]
41. Gm14465 ENSMUSG00000083691 1 1 - - - 1.000 - - predicted gene 14465 [Source:MGI Symbol;Acc:MGI:3651393]
42. BC051070 BC051070 6 1 - - - 1.000 - -
43. Gm12816 ENSMUSG00000083011 3 1 - - - 1.000 - - predicted gene 12816 [Source:MGI Symbol;Acc:MGI:3649628]
44. Clec4e ENSMUSG00000030142 3 1 - - - 1.000 - - C-type lectin domain family 4, member e [Source:MGI Symbol;Acc:MGI:1861232]
45. Cdx4 ENSMUSG00000031326 2 1 - - - 1.000 - - caudal type homeobox 4 [Source:MGI Symbol;Acc:MGI:88362]
46. Tesc ENSMUSG00000029359 6 1 - 1.000 - - - - tescalcin [Source:MGI Symbol;Acc:MGI:1930803]
47. Vmn1r-ps144 ENSMUSG00000067949 1 1 - - - 1.000 - - vomeronasal 1 receptor, pseudogene 144 [Source:MGI Symbol;Acc:MGI:3649147]
48. Cyp3a11 ENSMUSG00000056035 3 1 - 1.000 - - - - cytochrome P450, family 3, subfamily a, polypeptide 11 [Source:MGI Symbol;Acc:MGI:88609]
49. 1700001G01Rik ENSMUSG00000087170 3 1 - - - 1.000 - - RIKEN cDNA 1700001G01 gene [Source:MGI Symbol;Acc:MGI:1922683]
50. Ifi203 ENSMUSG00000039997 17 1 - - - 1.000 - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
51. Gm5766 ENSMUSG00000089645 11 1 - - - 1.000 - - predicted gene 5766 [Source:MGI Symbol;Acc:MGI:3643508]
52. Vma21-ps ENSMUSG00000061619 2 1 - 1.000 - - - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene [Source:MGI Symbol;Acc:MGI:3643145]
53. Il1rapl2 ENSMUSG00000059203 9 1 - 1.000 - - - - interleukin 1 receptor accessory protein-like 2 [Source:MGI Symbol;Acc:MGI:1913106]
54. Gm12279 ENSMUSG00000087120 4 1 - - - 1.000 - - predicted gene 12279 [Source:MGI Symbol;Acc:MGI:3649630]
55. Wfdc13 ENSMUSG00000067704 4 1 - - - - - 1.000 WAP four-disulfide core domain 13 [Source:MGI Symbol;Acc:MGI:3582777]
56. Gm15625 ENSMUSG00000082744 1 1 - - - 1.000 - - predicted gene 15625 [Source:MGI Symbol;Acc:MGI:3783069]
57. Gm25197 ENSMUSG00000095943 3 1 - 1.000 - - - - predicted gene, 25197 [Source:MGI Symbol;Acc:MGI:5454974]
58. Gm15070 Gm15070 1 1 - - - 1.000 - -
59. Gm22105 ENSMUSG00000080384 5 1 - - - 1.000 - - predicted gene, 22105 [Source:MGI Symbol;Acc:MGI:5451882]
60. Gm15971 ENSMUSG00000081692 1 1 - - - 1.000 - - predicted gene 15971 [Source:MGI Symbol;Acc:MGI:3802013]
61. Aanat ENSMUSG00000020804 2 1 - 1.000 - - - - arylalkylamine N-acetyltransferase [Source:MGI Symbol;Acc:MGI:1328365]
62. Gm5939 ENSMUSG00000083258 7 1 - - - 1.000 - - predicted pseudogene 5939 [Source:MGI Symbol;Acc:MGI:3648845]
63. Mcoln2 ENSMUSG00000011008 7 1 - 1.000 - - - - mucolipin 2 [Source:MGI Symbol;Acc:MGI:1915529]
64. Gm17619 ENSMUSG00000097514 7 0.97 - - - - - 0.970 predicted gene, 17619 [Source:MGI Symbol;Acc:MGI:4937253]
65. Rhoh ENSMUSG00000029204 19 0.958 - - - 0.958 - - ras homolog family member H [Source:MGI Symbol;Acc:MGI:1921984]
66. Apoh ENSMUSG00000000049 32 0.955 - 0.955 - - - - apolipoprotein H [Source:MGI Symbol;Acc:MGI:88058]
67. 2810430I11Rik ENSMUSG00000085766 22 0.945 - 0.945 - - - - RIKEN cDNA 2810430I11 gene [Source:MGI Symbol;Acc:MGI:3590515]
68. Tmigd1 ENSMUSG00000020839 18 0.933 - 0.933 - - - - transmembrane and immunoglobulin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913851]
69. Chrm4 ENSMUSG00000040495 18 0.931 - 0.931 - - - - cholinergic receptor, muscarinic 4 [Source:MGI Symbol;Acc:MGI:88399]
70. Nat1 ENSMUSG00000025588 11 0.931 - - - 0.931 - - N-acetyl transferase 1 [Source:MGI Symbol;Acc:MGI:97279]
71. Tlx1 ENSMUSG00000025215 26 0.931 - 0.931 - - - - T cell leukemia, homeobox 1 [Source:MGI Symbol;Acc:MGI:98769]
72. Ttc16 ENSMUSG00000039021 4 0.931 - 0.931 - - - - tetratricopeptide repeat domain 16 [Source:MGI Symbol;Acc:MGI:2443048]
73. Bst2 ENSMUSG00000046718 27 0.922 - 0.922 - - - - bone marrow stromal cell antigen 2 [Source:MGI Symbol;Acc:MGI:1916800]
74. Gm5446 ENSMUSG00000050243 19 0.919 - - - 0.919 - - predicted gene 5446 [Source:MGI Symbol;Acc:MGI:3644854]
75. Tcl1 ENSMUSG00000041359 12 0.907 - - - - - 0.907 T cell lymphoma breakpoint 1 [Source:MGI Symbol;Acc:MGI:1097166]
76. Ccl3 ENSMUSG00000000982 12 0.904 - - 0.904 - - - chemokine (C-C motif) ligand 3 [Source:MGI Symbol;Acc:MGI:98260]
77. Gpr114 Gpr114 5 0.895 - - - 0.895 - -
78. Gm11263 ENSMUSG00000083496 21 0.893 - - - 0.893 - - predicted gene 11263 [Source:MGI Symbol;Acc:MGI:3651899]
79. Tex40 4 0.884 - 0.884 - - - - testis expressed 40
80. Pcdhb16 ENSMUSG00000047910 27 0.881 - 0.881 - - - - protocadherin beta 16 [Source:MGI Symbol;Acc:MGI:2136752]
81. Gm11354 ENSMUSG00000081653 2 0.865 - 0.865 - - - - predicted gene 11354 [Source:MGI Symbol;Acc:MGI:3650603]
82. Slc6a15 ENSMUSG00000019894 81 0.862 - 0.862 - - - - solute carrier family 6 (neurotransmitter transporter), member 15 [Source:MGI Symbol;Acc:MGI:2143484]
83. 4930502E09Rik ENSMUSG00000086799 5 0.862 - 0.862 - - - - RIKEN cDNA 4930502E09 gene [Source:MGI Symbol;Acc:MGI:1922245]
84. Kcnn3 ENSMUSG00000000794 12 0.861 - - - - - 0.861 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 [Source:MGI Symbol;Acc:MGI:2153183]
85. Gm15862 ENSMUSG00000085739 1 0.861 - - - - - 0.861 predicted gene 15862 [Source:MGI Symbol;Acc:MGI:3801842]
86. 2210011C24Rik ENSMUSG00000074217 5 0.861 - - - - - 0.861 RIKEN cDNA 2210011C24 gene [Source:MGI Symbol;Acc:MGI:1917384]
87. Fmr1nb ENSMUSG00000062170 7 0.861 - - - - - 0.861 Fmr1 neighbor [Source:MGI Symbol;Acc:MGI:2672032]
88. Rgs22 ENSMUSG00000037627 17 0.861 - - - - - 0.861 regulator of G-protein signalling 22 [Source:MGI Symbol;Acc:MGI:3613651]
89. Akap2 ENSMUSG00000038729 3 0.861 - - - - - 0.861 A kinase (PRKA) anchor protein 2 [Source:MGI Symbol;Acc:MGI:1306795]
90. Rasgef1a ENSMUSG00000030134 2 0.861 - - - - - 0.861 RasGEF domain family, member 1A [Source:MGI Symbol;Acc:MGI:1917977]
91. Rhox2h ENSMUSG00000079627 2 0.861 - - - - - 0.861 reproductive homeobox 2H [Source:MGI Symbol;Acc:MGI:3713490]
92. Gm3608 ENSMUSG00000067017 3 0.861 - - - - - 0.861 predicted gene 3608 [Source:MGI Symbol;Acc:MGI:3804932]
93. Klk1 ENSMUSG00000063903 4 0.861 - - - - - 0.861 kallikrein 1 [Source:MGI Symbol;Acc:MGI:102850]
94. Gm9200 ENSMUSG00000083595 1 0.861 - - - - - 0.861 predicted gene 9200 [Source:MGI Symbol;Acc:MGI:3779839]
95. Gm15600 ENSMUSG00000085969 1 0.861 - - - - - 0.861 predicted gene 15600 [Source:MGI Symbol;Acc:MGI:3783047]
96. Gm11264 ENSMUSG00000087110 3 0.861 - - - - - 0.861 predicted gene 11264 [Source:MGI Symbol;Acc:MGI:3649480]
97. Ildr1 ENSMUSG00000022900 11 0.861 - - - - - 0.861 immunoglobulin-like domain containing receptor 1 [Source:MGI Symbol;Acc:MGI:2146574]
98. Gm10860 ENSMUSG00000093634 1 0.861 - - - - - 0.861 predicted gene 10860 [Source:MGI Symbol;Acc:MGI:3641729]
99. Gm13242 3 0.861 - - - - - 0.861 predicted gene 13242
100. Slamf6 ENSMUSG00000015314 1 0.861 - - - - - 0.861 SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]

There are 283 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA