Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Snhg11

Gene Name Gene ID Reads Annotation
Snhg11 ENSMUSG00000044349 1353 small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]







Genes with expression patterns similar to Snhg11

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Snhg11 ENSMUSG00000044349 1353 6 1.000 1.000 1.000 1.000 1.000 1.000 small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
2. Nefl ENSMUSG00000022055 4031 2.398 - 0.737 - 0.732 0.929 - neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
3. Stmn3 ENSMUSG00000027581 1327 2.389 - 0.722 - 0.734 0.933 - stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
4. Ina ENSMUSG00000034336 3835 2.359 - 0.717 - 0.782 0.860 - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
5. Ndrg4 ENSMUSG00000036564 629 1.825 - - - - 0.864 0.961 N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
6. Sncg ENSMUSG00000023064 1702 1.747 - - - 0.795 0.952 - synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
7. Mapt ENSMUSG00000018411 1834 1.701 - - - 0.795 0.906 - microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
8. Map6 ENSMUSG00000055407 476 1.666 - - - - 0.720 0.946 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
9. Rbfox1 ENSMUSG00000008658 758 1.65 - - - 0.815 0.835 - RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
10. Slc10a4 ENSMUSG00000029219 550 1.628 - - - 0.789 0.839 - solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
11. Klc1 ENSMUSG00000021288 4135 1.622 - - - - 0.759 0.863 kinesin light chain 1 [Source:MGI Symbol;Acc:MGI:107978]
12. Gap43 ENSMUSG00000047261 5946 1.613 - - - 0.733 0.880 - growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
13. Actl6b ENSMUSG00000029712 203 1.59 - - - 0.716 0.874 - actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
14. Stmn2 ENSMUSG00000027500 6200 1.58 - - - 0.701 0.879 - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
15. Lhx3 ENSMUSG00000026934 117 1.567 - - - 0.788 0.779 - LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
16. 3110035E14Rik 204 1.565 - - - 0.761 0.804 - RIKEN cDNA 3110035E14 gene
17. Myt1l ENSMUSG00000061911 81 1.545 - - - 0.738 0.807 - myelin transcription factor 1-like [Source:MGI Symbol;Acc:MGI:1100511]
18. Soga3 ENSMUSG00000038916 3972 1.544 - - - - 0.745 0.799 SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
19. Disp2 ENSMUSG00000040035 230 1.515 - - - 0.749 0.766 - dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
20. Ank3 ENSMUSG00000069601 3116 1.493 - - - 0.727 0.766 - ankyrin 3, epithelial [Source:MGI Symbol;Acc:MGI:88026]
21. Slc6a1 ENSMUSG00000030310 22 1.49 - - - 0.753 0.737 - solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
22. Kif5a ENSMUSG00000074657 425 1.481 - 0.713 - - 0.768 - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
23. Tmem198 ENSMUSG00000051703 118 1.446 - - 0.743 - 0.703 - transmembrane protein 198 [Source:MGI Symbol;Acc:MGI:2443133]
24. Elavl2 ENSMUSG00000008489 2109 1.436 - 0.711 - - 0.725 - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
25. Idh1 ENSMUSG00000025950 6534 0.947 - - - - - 0.947 isocitrate dehydrogenase 1 (NADP+), soluble [Source:MGI Symbol;Acc:MGI:96413]
26. Plk3 ENSMUSG00000028680 442 0.939 - - - - - 0.939 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
27. Slco5a1 ENSMUSG00000025938 586 0.937 - - - - - 0.937 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
28. Mfng ENSMUSG00000018169 425 0.932 - - - - - 0.932 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
29. Rab14 ENSMUSG00000026878 8334 0.929 - - - - - 0.929 RAB14, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915615]
30. Ccdc104 Ccdc104 1111 0.928 - - - - - 0.928
31. Coq10a ENSMUSG00000039914 324 0.928 - - - - - 0.928 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
32. Jak2 ENSMUSG00000024789 1097 0.927 - - - - - 0.927 Janus kinase 2 [Source:MGI Symbol;Acc:MGI:96629]
33. Dnajc21 ENSMUSG00000044224 1073 0.926 - - - - - 0.926 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
34. Xk ENSMUSG00000015342 218 0.924 - - - - - 0.924 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
35. Gm16344 ENSMUSG00000084824 377 0.924 - - - - - 0.924 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
36. Gm15966 ENSMUSG00000085865 150 0.924 - - - - - 0.924 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
37. Ubap1 ENSMUSG00000028437 2702 0.924 - - - - - 0.924 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
38. Megf10 ENSMUSG00000024593 890 0.923 - - - - - 0.923 multiple EGF-like-domains 10 [Source:MGI Symbol;Acc:MGI:2685177]
39. Adm ENSMUSG00000030790 312 0.923 - - - - - 0.923 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
40. Ccdc68 ENSMUSG00000038903 129 0.923 - - - - - 0.923 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
41. Gnptg ENSMUSG00000035521 519 0.923 - - - - - 0.923 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
42. Rragd ENSMUSG00000028278 762 0.923 - - - - - 0.923 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
43. Supt4a ENSMUSG00000020485 3703 0.923 - - - - - 0.923 suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
44. Zfp687 ENSMUSG00000019338 583 0.923 - - - - - 0.923 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
45. Acyp1 ENSMUSG00000008822 1101 0.923 - - - - - 0.923 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
46. 4632415L05Rik ENSMUSG00000048106 222 0.923 - - - - - 0.923 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
47. Bcl7b ENSMUSG00000029681 996 0.923 - - - - - 0.923 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
48. Atp6v0c ENSMUSG00000024121 107 0.923 - - - - - 0.923 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
49. Atxn2l ENSMUSG00000032637 1322 0.922 - - - - - 0.922 ataxin 2-like [Source:MGI Symbol;Acc:MGI:2446242]
50. Eif2b5 ENSMUSG00000003235 2067 0.922 - - - - - 0.922 eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:MGI Symbol;Acc:MGI:2446176]
51. Stk11 ENSMUSG00000003068 745 0.922 - - - - - 0.922 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
52. Fbxl6 ENSMUSG00000022559 1084 0.922 - - - - - 0.922 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
53. Tmub1 ENSMUSG00000028958 444 0.921 - - - - - 0.921 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
54. Zkscan1 ENSMUSG00000029729 2845 0.921 - - - - - 0.921 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
55. Arf2 ENSMUSG00000062421 4459 0.921 - - - - - 0.921 ADP-ribosylation factor 2 [Source:MGI Symbol;Acc:MGI:99595]
56. Rbm12b1 ENSMUSG00000046667 331 0.921 - - - - - 0.921 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
57. Tstd3 ENSMUSG00000028251 1160 0.921 - - - - - 0.921 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
58. Cflar ENSMUSG00000026031 1594 0.92 - - - - - 0.920 CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
59. Kcnh2 ENSMUSG00000038319 806 0.92 - - - - - 0.920 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
60. Caskin2 ENSMUSG00000034471 316 0.92 - - - - - 0.920 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
61. Snapin ENSMUSG00000001018 1886 0.919 - - - - - 0.919 SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
62. Dpp8 ENSMUSG00000032393 1163 0.919 - - - - - 0.919 dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
63. Dym ENSMUSG00000035765 507 0.919 - - - - - 0.919 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
64. Fam160a2 ENSMUSG00000044465 874 0.918 - - - - - 0.918 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
65. Mtmr10 ENSMUSG00000030522 476 0.918 - - - - - 0.918 myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
66. Zfp131 ENSMUSG00000094870 3397 0.917 - - - - - 0.917 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
67. 2810408I11Rik ENSMUSG00000087213 916 0.917 - - - - - 0.917 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
68. Chd7 ENSMUSG00000041235 7625 0.916 - - - - - 0.916 chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
69. Prrg2 ENSMUSG00000007837 453 0.916 - - - - - 0.916 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]
70. Nfkbib ENSMUSG00000030595 1018 0.916 - - - - - 0.916 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta [Source:MGI Symbol;Acc:MGI:104752]
71. Ablim1 ENSMUSG00000025085 1169 0.916 - - - - - 0.916 actin-binding LIM protein 1 [Source:MGI Symbol;Acc:MGI:1194500]
72. Sms ENSMUSG00000071708 2311 0.915 - - - - - 0.915 spermine synthase [Source:MGI Symbol;Acc:MGI:109490]
73. Syvn1 ENSMUSG00000024807 910 0.915 - - - - - 0.915 synovial apoptosis inhibitor 1, synoviolin [Source:MGI Symbol;Acc:MGI:1921376]
74. Usp42 ENSMUSG00000051306 1252 0.915 - - - - - 0.915 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
75. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.915 - - - - - 0.915 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
76. Fgd4 ENSMUSG00000022788 6160 0.915 - - - - - 0.915 FYVE, RhoGEF and PH domain containing 4 [Source:MGI Symbol;Acc:MGI:2183747]
77. Nufip1 ENSMUSG00000022009 2226 0.915 - - - - - 0.915 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
78. Fryl ENSMUSG00000070733 1717 0.915 - - - - - 0.915 FRY like transcription coactivator [Source:MGI Symbol;Acc:MGI:1919563]
79. Myo9b ENSMUSG00000004677 902 0.914 - - - - - 0.914 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
80. Pdhx ENSMUSG00000010914 1382 0.914 - - - - - 0.914 pyruvate dehydrogenase complex, component X [Source:MGI Symbol;Acc:MGI:1351627]
81. Rnf31 ENSMUSG00000047098 530 0.914 - - - - - 0.914 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
82. Gm12115 ENSMUSG00000099902 2125 0.913 - - - - - 0.913 predicted gene 12115 [Source:MGI Symbol;Acc:MGI:3652288]
83. Enah ENSMUSG00000022995 1908 0.913 - - - - - 0.913 ENAH actin regulator [Source:MGI Symbol;Acc:MGI:108360]
84. Shroom4 ENSMUSG00000068270 785 0.913 - - - - - 0.913 shroom family member 4 [Source:MGI Symbol;Acc:MGI:2685570]
85. Ppm1d ENSMUSG00000020525 1303 0.912 - - - - - 0.912 protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
86. Gm10576 ENSMUSG00000102578 235 0.912 - - - - - 0.912 predicted gene 10576 [Source:MGI Symbol;Acc:MGI:3642535]
87. Arid3b ENSMUSG00000004661 2972 0.912 - - - - - 0.912 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
88. Pon2 ENSMUSG00000032667 1139 0.911 - - - - - 0.911 paraoxonase 2 [Source:MGI Symbol;Acc:MGI:106687]
89. Man2a2 ENSMUSG00000038886 1255 0.911 - - - - - 0.911 mannosidase 2, alpha 2 [Source:MGI Symbol;Acc:MGI:2150656]
90. Ptpmt1 ENSMUSG00000063235, ENSMUSG00000110860 1572 0.911 - - - - - 0.911 protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:66461]
91. Fcgrt ENSMUSG00000003420 484 0.911 - - - - - 0.911 Fc receptor, IgG, alpha chain transporter [Source:MGI Symbol;Acc:MGI:103017]
92. Timm50 ENSMUSG00000003438 2037 0.91 - - - - - 0.910 translocase of inner mitochondrial membrane 50 [Source:MGI Symbol;Acc:MGI:1913775]
93. Prkar2a ENSMUSG00000032601 1406 0.91 - - - - - 0.910 protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
94. Trim23 ENSMUSG00000021712 798 0.91 - - - - - 0.910 tripartite motif-containing 23 [Source:MGI Symbol;Acc:MGI:1933161]
95. Dkk3 ENSMUSG00000030772 426 0.909 - - - - - 0.909 dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
96. Mdm1 ENSMUSG00000020212 835 0.909 - - - - - 0.909 transformed mouse 3T3 cell double minute 1 [Source:MGI Symbol;Acc:MGI:96951]
97. Ptx3 ENSMUSG00000027832 735 0.909 - - - - - 0.909 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
98. Zc3h7a ENSMUSG00000037965 1775 0.908 - - - - - 0.908 zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
99. Narg2 Narg2 1692 0.908 - - - - - 0.908
100. Trib1 ENSMUSG00000032501 1194 0.908 - - - - - 0.908 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]

There are 366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA