Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Snhg1

Gene Name Gene ID Reads Annotation
Snhg1 ENSMUSG00000108414 10005 small nucleolar RNA host gene 1 [Source:MGI Symbol;Acc:MGI:3763743]







Genes with expression patterns similar to Snhg1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Snhg1 ENSMUSG00000108414 10005 6 1.000 1.000 1.000 1.000 1.000 1.000 small nucleolar RNA host gene 1 [Source:MGI Symbol;Acc:MGI:3763743]
2. Uqcrh ENSMUSG00000063882 9620 0.979 0.979 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:MGI Symbol;Acc:MGI:1913826]
3. Aasdhppt ENSMUSG00000025894 3055 0.959 0.959 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:MGI Symbol;Acc:MGI:1914868]
4. Golga1 ENSMUSG00000026754 889 0.952 0.952 - - - - - golgi autoantigen, golgin subfamily a, 1 [Source:MGI Symbol;Acc:MGI:1924149]
5. Ppp1cc ENSMUSG00000004455 7445 0.941 0.941 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:MGI Symbol;Acc:MGI:104872]
6. Ranbp3 ENSMUSG00000002372 2738 0.937 0.937 - - - - - RAN binding protein 3 [Source:MGI Symbol;Acc:MGI:1919060]
7. Cirh1a 3509 0.935 0.935 - - - - - cirrhosis, autosomal recessive 1A (human), transcript variant X1
8. Gpaa1 ENSMUSG00000022561 4947 0.934 0.934 - - - - - GPI anchor attachment protein 1 [Source:MGI Symbol;Acc:MGI:1202392]
9. Rpa2 ENSMUSG00000028884 4921 0.922 0.922 - - - - - replication protein A2 [Source:MGI Symbol;Acc:MGI:1339939]
10. Mtch1 ENSMUSG00000024012 7467 0.917 0.917 - - - - - mitochondrial carrier 1 [Source:MGI Symbol;Acc:MGI:1929261]
11. Stt3b ENSMUSG00000032437 11214 0.914 0.914 - - - - - STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915542]
12. Dhx15 ENSMUSG00000029169 14337 0.884 0.884 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:MGI Symbol;Acc:MGI:1099786]
13. Ppp2ca ENSMUSG00000020349 20223 0.883 0.883 - - - - - protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform [Source:MGI Symbol;Acc:MGI:1321159]
14. Wdfy3 ENSMUSG00000043940 14795 0.859 0.859 - - - - - WD repeat and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:1096875]
15. Eif3g ENSMUSG00000070319 6281 0.809 - 0.809 - - - - eukaryotic translation initiation factor 3, subunit G [Source:MGI Symbol;Acc:MGI:1858258]
16. Fto ENSMUSG00000055932 5612 0.794 - 0.794 - - - - fat mass and obesity associated [Source:MGI Symbol;Acc:MGI:1347093]
17. Elovl5 ENSMUSG00000032349 6565 0.786 - 0.786 - - - - ELOVL family member 5, elongation of long chain fatty acids (yeast) [Source:MGI Symbol;Acc:MGI:1916051]
18. Ddx46 ENSMUSG00000021500 5083 0.78 - 0.780 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:MGI Symbol;Acc:MGI:1920895]
19. Ddx39b ENSMUSG00000019432 31517 0.749 0.749 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
20. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 0.746 0.746 - - - - - serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
21. Gipc1 ENSMUSG00000019433 9620 0.736 - 0.736 - - - - GIPC PDZ domain containing family, member 1 [Source:MGI Symbol;Acc:MGI:1926252]
22. Zfp282 ENSMUSG00000025821 1657 0.733 - 0.733 - - - - zinc finger protein 282 [Source:MGI Symbol;Acc:MGI:2141413]
23. Ube2e3 ENSMUSG00000027011 12194 0.732 - 0.732 - - - - ubiquitin-conjugating enzyme E2E 3 [Source:MGI Symbol;Acc:MGI:107412]
24. Cd81 ENSMUSG00000037706 15457 0.719 - 0.719 - - - - CD81 antigen [Source:MGI Symbol;Acc:MGI:1096398]
25. Sgol1 1886 0.707 0.707 - - - - - shugoshin-like 1 (S. pombe), transcript variant X2
26. Pno1 ENSMUSG00000020116 5621 0.707 0.707 - - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
27. Nit2 ENSMUSG00000022751 895 0.705 0.705 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
28. Poldip2 ENSMUSG00000001100 3214 0.705 0.705 - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915061]
29. Gm10177 ENSMUSG00000090136 864 0.705 0.705 - - - - - predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
30. Casc3 ENSMUSG00000078676 3883 0.705 - 0.705 - - - - cancer susceptibility candidate 3 [Source:MGI Symbol;Acc:MGI:2179723]
31. Cwc27 ENSMUSG00000021715 899 0.703 0.703 - - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
32. Lin7c ENSMUSG00000027162 3559 0.703 0.703 - - - - - lin-7 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1330839]
33. Cnot11 ENSMUSG00000003135 1391 0.703 0.703 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
34. Cep68 ENSMUSG00000044066 1055 0.703 0.703 - - - - - centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
35. Sf3b4 ENSMUSG00000068856 20383 0.703 0.703 - - - - - splicing factor 3b, subunit 4 [Source:MGI Symbol;Acc:MGI:109580]
36. Fsd1 ENSMUSG00000011589 902 0.702 0.702 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
37. Rprm ENSMUSG00000075334 1010 0.702 0.702 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate [Source:MGI Symbol;Acc:MGI:1915124]
38. Ly75 ENSMUSG00000026980 766 0.702 0.702 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
39. Gm13680 ENSMUSG00000081400 447 0.702 0.702 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
40. Gatad1 ENSMUSG00000007415 3350 0.702 0.702 - - - - - GATA zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1914460]
41. Dqx1 ENSMUSG00000009145 545 0.702 0.702 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
42. Haus8 ENSMUSG00000035439 1485 0.702 0.702 - - - - - 4HAUS augmin-like complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1923728]
43. Tacc3 ENSMUSG00000037313 6332 0.702 0.702 - - - - - transforming, acidic coiled-coil containing protein 3 [Source:MGI Symbol;Acc:MGI:1341163]
44. Kdm4b ENSMUSG00000024201 1440 0.702 0.702 - - - - - lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
45. 2310061I04Rik ENSMUSG00000050705 1463 0.702 0.702 - - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
46. Kansl1 ENSMUSG00000018412 2084 0.702 0.702 - - - - - KAT8 regulatory NSL complex subunit 1 [Source:MGI Symbol;Acc:MGI:1923969]
47. Dpep1 ENSMUSG00000019278 422 0.701 0.701 - - - - - dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
48. Hdac9 ENSMUSG00000004698 287 0.701 0.701 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
49. Ccdc174 ENSMUSG00000034083 1439 0.701 0.701 - - - - - coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
50. Lnx2 ENSMUSG00000016520 439 0.701 0.701 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
51. Lrrc42 ENSMUSG00000028617 1235 0.701 0.701 - - - - - leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]
52. Zzef1 ENSMUSG00000055670 953 0.701 0.701 - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
53. Sos2 ENSMUSG00000034801 3613 0.701 0.701 - - - - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:MGI Symbol;Acc:MGI:98355]
54. Epb4.1l4a Epb4.1l4a 1817 0.701 0.701 - - - - -
55. Yod1 ENSMUSG00000046404 793 0.701 0.701 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
56. Hipk1 ENSMUSG00000008730 2363 0.701 0.701 - - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
57. Lmna ENSMUSG00000028063 622 0.7 0.700 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
58. Gm12521 Gm12521 210 0.7 0.700 - - - - -
59. Ucp2 ENSMUSG00000033685 2664 0.7 0.700 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
60. Mettl15 ENSMUSG00000057234 379 0.7 0.700 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA