Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sncb

Gene Name Gene ID Reads Annotation
Sncb ENSMUSG00000034891 53 synuclein, beta [Source:MGI Symbol;Acc:MGI:1889011]







Genes with expression patterns similar to Sncb

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sncb ENSMUSG00000034891 53 6 1.000 1.000 1.000 1.000 1.000 1.000 synuclein, beta [Source:MGI Symbol;Acc:MGI:1889011]
2. Neurog1 ENSMUSG00000048904 327 1.493 0.736 - - - 0.757 - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
3. Pou4f1 ENSMUSG00000048349 61 1.489 0.720 - 0.769 - - - POU domain, class 4, transcription factor 1 [Source:MGI Symbol;Acc:MGI:102525]
4. Lhx5 ENSMUSG00000029595 102 0.871 - - 0.871 - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
5. Map3k13 ENSMUSG00000033618 21 0.863 - - 0.863 - - - mitogen-activated protein kinase kinase kinase 13 [Source:MGI Symbol;Acc:MGI:2444243]
6. Gm5124 ENSMUSG00000051537 12 0.856 - - 0.856 - - - predicted pseudogene 5124 [Source:MGI Symbol;Acc:MGI:3643622]
7. Iqsec3 ENSMUSG00000040797 23 0.856 - - 0.856 - - - IQ motif and Sec7 domain 3 [Source:MGI Symbol;Acc:MGI:2677208]
8. 2310065F04Rik ENSMUSG00000087410 10 0.834 - - 0.834 - - - RIKEN cDNA 2310065F04 gene [Source:MGI Symbol;Acc:MGI:1921434]
9. Scrt1 ENSMUSG00000048385 155 0.822 - - 0.822 - - - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
10. Id4 ENSMUSG00000021379 452 0.81 - - 0.810 - - - inhibitor of DNA binding 4 [Source:MGI Symbol;Acc:MGI:99414]
11. Clgn ENSMUSG00000002190 17 0.807 - - 0.807 - - - calmegin [Source:MGI Symbol;Acc:MGI:107472]
12. Lamp5 ENSMUSG00000027270 112 0.806 - - 0.806 - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
13. Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 0.804 - - 0.804 - - - forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]
14. Pex5l ENSMUSG00000027674 104 0.801 - - 0.801 - - - peroxisomal biogenesis factor 5-like [Source:MGI Symbol;Acc:MGI:1916672]
15. Slc32a1 ENSMUSG00000037771 59 0.793 - - 0.793 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:MGI Symbol;Acc:MGI:1194488]
16. Nacad ENSMUSG00000041073 114 0.792 - - 0.792 - - - NAC alpha domain containing [Source:MGI Symbol;Acc:MGI:3603030]
17. Dlgap3 ENSMUSG00000042388 56 0.792 - - - 0.792 - - DLG associated protein 3 [Source:MGI Symbol;Acc:MGI:3039563]
18. Gm4258 ENSMUSG00000098243 99 0.783 - - 0.783 - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
19. 5730457N03Rik 5730457N03Rik 14 0.782 - - 0.782 - - -
20. Cplx1 ENSMUSG00000033615 94 0.78 - - 0.780 - - - complexin 1 [Source:MGI Symbol;Acc:MGI:104727]
21. Cdhr1 ENSMUSG00000021803 79 0.774 - - 0.774 - - - cadherin-related family member 1 [Source:MGI Symbol;Acc:MGI:2157782]
22. Bhlhe22 ENSMUSG00000025128 194 0.77 - - 0.770 - - - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]
23. Sp8 ENSMUSG00000048562 219 0.763 - - - - 0.763 - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
24. Klc3 ENSMUSG00000040714 22 0.762 - - - - 0.762 - kinesin light chain 3 [Source:MGI Symbol;Acc:MGI:1277971]
25. Pcdh8 ENSMUSG00000036422 452 0.761 - - 0.761 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
26. 3110035E14Rik 204 0.757 - - 0.757 - - - RIKEN cDNA 3110035E14 gene
27. Gpr45 ENSMUSG00000041907 12 0.749 - - 0.749 - - - G protein-coupled receptor 45 [Source:MGI Symbol;Acc:MGI:2135882]
28. RP24-351J24.2 RP24-351J24.2 8 0.747 - - 0.747 - - -
29. Kcnc1 ENSMUSG00000058975 26 0.747 - - 0.747 - - - potassium voltage gated channel, Shaw-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96667]
30. Ppp1r1a ENSMUSG00000022490 236 0.745 - 0.745 - - - - protein phosphatase 1, regulatory inhibitor subunit 1A [Source:MGI Symbol;Acc:MGI:1889595]
31. Gm12224 ENSMUSG00000085888 7 0.739 - - 0.739 - - - predicted gene 12224 [Source:MGI Symbol;Acc:MGI:3651369]
32. Gm13935 ENSMUSG00000083320 6 0.739 - - 0.739 - - - predicted gene 13935 [Source:MGI Symbol;Acc:MGI:3651886]
33. Pou3f4 ENSMUSG00000056854 95 0.736 0.736 - - - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
34. Gdap1 ENSMUSG00000025777 166 0.726 - - 0.726 - - - ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
35. Evx1 ENSMUSG00000005503 33 0.725 - - 0.725 - - - even-skipped homeobox 1 [Source:MGI Symbol;Acc:MGI:95461]
36. Syt2 ENSMUSG00000026452 261 0.721 - - - - - 0.721 synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]
37. Neurod1 ENSMUSG00000034701 1390 0.721 0.721 - - - - - neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
38. Fam78b ENSMUSG00000060568 193 0.721 - - 0.721 - - - family with sequence similarity 78, member B [Source:MGI Symbol;Acc:MGI:2443050]
39. Ttc9b ENSMUSG00000007944 37 0.719 - - 0.719 - - - tetratricopeptide repeat domain 9B [Source:MGI Symbol;Acc:MGI:1920282]
40. Mlc1 ENSMUSG00000035805 10 0.719 0.719 - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) [Source:MGI Symbol;Acc:MGI:2157910]
41. Trim72 ENSMUSG00000042828 25 0.718 0.718 - - - - - tripartite motif-containing 72 [Source:MGI Symbol;Acc:MGI:3612190]
42. Grm2 ENSMUSG00000023192 147 0.716 - - 0.716 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
43. Wnt7a ENSMUSG00000030093 126 0.716 - - 0.716 - - - wingless-type MMTV integration site family, member 7A [Source:MGI Symbol;Acc:MGI:98961]
44. Rgs4 ENSMUSG00000038530 539 0.714 - - 0.714 - - - regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
45. Ppp2r2c ENSMUSG00000029120 61 0.714 - - 0.714 - - - protein phosphatase 2, regulatory subunit B, gamma [Source:MGI Symbol;Acc:MGI:2442660]
46. Gpr98 Gpr98 1797 0.713 0.713 - - - - -
47. Phactr3 ENSMUSG00000027525 233 0.713 - - 0.713 - - - phosphatase and actin regulator 3 [Source:MGI Symbol;Acc:MGI:1921439]
48. Psmb8 ENSMUSG00000024338 16 0.712 0.712 - - - - - proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) [Source:MGI Symbol;Acc:MGI:1346527]
49. Foxb1 ENSMUSG00000059246 293 0.712 0.712 - - - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
50. 0610040B09Rik 0610040B09Rik 333 0.711 0.711 - - - - -
51. Elavl3 ENSMUSG00000003410 2830 0.709 - - 0.709 - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
52. Spock2 ENSMUSG00000058297 1096 0.708 - - 0.708 - - - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
53. Gm16551 ENSMUSG00000066477 147 0.708 - - 0.708 - - - predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
54. Zic3 ENSMUSG00000067860 549 0.708 0.708 - - - - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
55. Thsd7b ENSMUSG00000042581 91 0.706 - - - - 0.706 - thrombospondin, type I, domain containing 7B [Source:MGI Symbol;Acc:MGI:2443925]
56. Cdk5r2 ENSMUSG00000090071 67 0.706 0.706 - - - - - cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]
57. Vsx2 ENSMUSG00000021239 34 0.705 - - 0.705 - - - visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
58. Gm12688 ENSMUSG00000086096, ENSMUSG00000116139 86 0.704 - - 0.704 - - - predicted gene 12688 [Source:MGI Symbol;Acc:MGI:3650434]
59. Ap3b2 ENSMUSG00000062444 565 0.704 - - 0.704 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
60. Hmx1 ENSMUSG00000067438 72 0.703 - - 0.703 - - - H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]
61. Atcay ENSMUSG00000034958 52 0.701 - - - - 0.701 - ataxia, cerebellar, Cayman type [Source:MGI Symbol;Acc:MGI:2448730]
62. Tub ENSMUSG00000031028 165 0.701 - - 0.701 - - - tubby bipartite transcription factor [Source:MGI Symbol;Acc:MGI:2651573]
63. Npr2 ENSMUSG00000028469 946 0.7 - - 0.700 - - - natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA