Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Smndc1

Gene Name Gene ID Reads Annotation
Smndc1 ENSMUSG00000025024 8790 survival motor neuron domain containing 1 [Source:MGI Symbol;Acc:MGI:1923729]







Genes with expression patterns similar to Smndc1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smndc1 ENSMUSG00000025024 8790 6 1.000 1.000 1.000 1.000 1.000 1.000 survival motor neuron domain containing 1 [Source:MGI Symbol;Acc:MGI:1923729]
2. Psmd13 ENSMUSG00000025487 5365 0.817 - - - - - 0.817 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 [Source:MGI Symbol;Acc:MGI:1345192]
3. Cep128 ENSMUSG00000061533 494 0.81 - - - - - 0.810 centrosomal protein 128 [Source:MGI Symbol;Acc:MGI:1922466]
4. Adcy1 ENSMUSG00000020431 381 0.808 - - - - - 0.808 adenylate cyclase 1 [Source:MGI Symbol;Acc:MGI:99677]
5. Ddx52 ENSMUSG00000020677 2667 0.803 - - - - - 0.803 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:MGI Symbol;Acc:MGI:1925644]
6. Calcoco1 ENSMUSG00000023055 808 0.802 - - - - - 0.802 calcium binding and coiled coil domain 1 [Source:MGI Symbol;Acc:MGI:1914738]
7. Asah1 ENSMUSG00000031591 856 0.801 - - - - - 0.801 N-acylsphingosine amidohydrolase 1 [Source:MGI Symbol;Acc:MGI:1277124]
8. 3110082I17Rik ENSMUSG00000053553 775 0.8 - - - - - 0.800 RIKEN cDNA 3110082I17 gene [Source:MGI Symbol;Acc:MGI:1920462]
9. Polr2c ENSMUSG00000031783 1639 0.794 - - - - - 0.794 polymerase (RNA) II (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:109299]
10. Magi1 ENSMUSG00000045095 959 0.791 - - - - - 0.791 membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:MGI Symbol;Acc:MGI:1203522]
11. Zfp60 ENSMUSG00000037640 2806 0.79 - - - - - 0.790 zinc finger protein 60 [Source:MGI Symbol;Acc:MGI:99207]
12. Ndufc1 ENSMUSG00000037152 5070 0.788 - - - - - 0.788 NADH:ubiquinone oxidoreductase subunit C1 [Source:MGI Symbol;Acc:MGI:1913627]
13. Psmb1 ENSMUSG00000014769 7153 0.787 - - - - - 0.787 proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884]
14. Srek1 ENSMUSG00000032621 3541 0.786 - - - - - 0.786 splicing regulatory glutamine/lysine-rich protein 1 [Source:MGI Symbol;Acc:MGI:2145245]
15. Dxo ENSMUSG00000040482 1002 0.786 - - - - - 0.786 decapping exoribonuclease [Source:MGI Symbol;Acc:MGI:1890444]
16. Slc25a13 ENSMUSG00000015112 2038 0.786 - - - - - 0.786 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 [Source:MGI Symbol;Acc:MGI:1354721]
17. Coro2b ENSMUSG00000041729 1484 0.784 - - - - - 0.784 coronin, actin binding protein, 2B [Source:MGI Symbol;Acc:MGI:2444283]
18. Tbc1d25 ENSMUSG00000039201 634 0.782 - - - - - 0.782 TBC1 domain family, member 25 [Source:MGI Symbol;Acc:MGI:2444862]
19. Socs6 ENSMUSG00000056153 4730 0.782 - - - - - 0.782 suppressor of cytokine signaling 6 [Source:MGI Symbol;Acc:MGI:1924885]
20. Bcl2l1 ENSMUSG00000007659 2577 0.78 - - - - - 0.780 BCL2-like 1 [Source:MGI Symbol;Acc:MGI:88139]
21. Zbtb43 ENSMUSG00000026788 901 0.778 - - - - - 0.778 zinc finger and BTB domain containing 43 [Source:MGI Symbol;Acc:MGI:1919084]
22. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.778 - - - - - 0.778 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
23. Ids ENSMUSG00000035847 777 0.777 - - - - - 0.777 iduronate 2-sulfatase [Source:MGI Symbol;Acc:MGI:96417]
24. Rsl24d1 ENSMUSG00000032215 6534 0.777 - - - - - 0.777 ribosomal L24 domain containing 1 [Source:MGI Symbol;Acc:MGI:2681840]
25. Zfp259 Zfp259 2259 0.776 - - - - - 0.776
26. Taz ENSMUSG00000009995 1408 0.774 - - - - - 0.774 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
27. Amd1 ENSMUSG00000075232 1041 0.773 - - - - - 0.773 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
28. Mga ENSMUSG00000033943 2792 0.773 - - - - - 0.773 MAX gene associated [Source:MGI Symbol;Acc:MGI:1352483]
29. Htr1b ENSMUSG00000049511 77 0.773 - - - - - 0.773 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
30. Ostm1 ENSMUSG00000038280 208 0.772 - - - - - 0.772 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
31. Gtf2f2 ENSMUSG00000067995 1487 0.771 - - - - - 0.771 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
32. Alkbh8 ENSMUSG00000025899 1212 0.77 - - - - - 0.770 alkB homolog 8, tRNA methyltransferase [Source:MGI Symbol;Acc:MGI:1914917]
33. Sgol1 1886 0.77 - - - - - 0.770 shugoshin-like 1 (S. pombe), transcript variant X2
34. Usp50 ENSMUSG00000027364 304 0.77 - - - - - 0.770 ubiquitin specific peptidase 50 [Source:MGI Symbol;Acc:MGI:1922333]
35. Crcp ENSMUSG00000025532 699 0.77 - - - - - 0.770 calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
36. Bcr ENSMUSG00000009681 588 0.769 - - - - - 0.769 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
37. Socs4 ENSMUSG00000048379 1881 0.769 - - - - - 0.769 suppressor of cytokine signaling 4 [Source:MGI Symbol;Acc:MGI:1914546]
38. Mrpl37 ENSMUSG00000028622 2555 0.769 - - - - - 0.769 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
39. Gng5 ENSMUSG00000068523 1998 0.767 - - - - - 0.767 guanine nucleotide binding protein (G protein), gamma 5 [Source:MGI Symbol;Acc:MGI:109164]
40. Pcdha2 ENSMUSG00000104148 246 0.767 - - - - - 0.767 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
41. Fam131a ENSMUSG00000050821 113 0.767 - - - - - 0.767 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
42. Gnas ENSMUSG00000027523 8369 0.767 0.767 - - - - - GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus [Source:MGI Symbol;Acc:MGI:95777]
43. 9130023H24Rik ENSMUSG00000062944 258 0.767 - - - - - 0.767 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
44. Timmdc1 ENSMUSG00000002846 1045 0.766 - - - - - 0.766 translocase of inner mitochondrial membrane domain containing 1 [Source:MGI Symbol;Acc:MGI:1922139]
45. Hes3 ENSMUSG00000028946 73 0.765 - - - - - 0.765 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
46. Sh3rf2 ENSMUSG00000057719 60 0.765 - - - - - 0.765 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
47. Hbb-bs ENSMUSG00000052305 2551 0.765 - - - - - 0.765 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
48. Chchd4 ENSMUSG00000034203 1568 0.764 - - - - - 0.764 coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:MGI Symbol;Acc:MGI:1919420]
49. Sema6d ENSMUSG00000027200 1413 0.764 - - - - - 0.764 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
50. Tfam ENSMUSG00000003923 5233 0.764 - - - - - 0.764 transcription factor A, mitochondrial [Source:MGI Symbol;Acc:MGI:107810]
51. Nup205 ENSMUSG00000038759 1267 0.764 - - - - - 0.764 nucleoporin 205 [Source:MGI Symbol;Acc:MGI:2141625]
52. Zfp358 ENSMUSG00000047264 1441 0.763 - - - - - 0.763 zinc finger protein 358 [Source:MGI Symbol;Acc:MGI:2153740]
53. Asb13 ENSMUSG00000033781 402 0.763 - - - - - 0.763 ankyrin repeat and SOCS box-containing 13 [Source:MGI Symbol;Acc:MGI:2145525]
54. Gm24451 ENSMUSG00000065287 57 0.763 - - - - - 0.763 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
55. Papd5 ENSMUSG00000036779 1511 0.763 - - - - - 0.763 PAP associated domain containing 5 [Source:MGI Symbol;Acc:MGI:1917820]
56. Stbd1 ENSMUSG00000047963 377 0.763 - - - - - 0.763 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
57. Gm14286 ENSMUSG00000087445 166 0.762 - - - - - 0.762 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
58. Phf19 ENSMUSG00000026873 83 0.762 - - - - - 0.762 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
59. Gm13910 ENSMUSG00000063684 126 0.762 - - - - - 0.762 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
60. Pak4 ENSMUSG00000030602 1778 0.762 - - - - - 0.762 p21 (RAC1) activated kinase 4 [Source:MGI Symbol;Acc:MGI:1917834]
61. Rpl31-ps8 ENSMUSG00000067870 6977 0.762 - - - - - 0.762 ribosomal protein L31, pseudogene 8 [Source:MGI Symbol;Acc:MGI:3647726]
62. Gm10307 ENSMUSG00000101093 159 0.762 - - - - - 0.762 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
63. Dnajb6 ENSMUSG00000029131 2940 0.761 - - - - - 0.761 DnaJ heat shock protein family (Hsp40) member B6 [Source:MGI Symbol;Acc:MGI:1344381]
64. Il17d ENSMUSG00000050222 119 0.761 - - - - - 0.761 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
65. Cox8a ENSMUSG00000035885 39337 0.761 - - - - - 0.761 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
66. Pdp2 ENSMUSG00000048371 637 0.761 - - - - - 0.761 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
67. Coq3 ENSMUSG00000028247 463 0.76 - - - - - 0.760 coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
68. 2310015A10Rik ENSMUSG00000097729 199 0.759 - - - - - 0.759 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
69. Gucd1 ENSMUSG00000033416 864 0.759 - - - - - 0.759 guanylyl cyclase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916028]
70. Gm13476 Gm13476 165 0.759 - - - - - 0.759
71. Rad51ap1 ENSMUSG00000030346 1698 0.758 - - - - - 0.758 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
72. Atp6ap1 ENSMUSG00000019087 614 0.758 - - - - - 0.758 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
73. B630005N14Rik B630005N14Rik 2332 0.758 - - - - - 0.758
74. Cct6a ENSMUSG00000029447 13766 0.758 - 0.758 - - - - chaperonin containing Tcp1, subunit 6a (zeta) [Source:MGI Symbol;Acc:MGI:107943]
75. Mir1931 ENSMUSG00000089214 1189 0.757 - - - - - 0.757 microRNA 1931 [Source:MGI Symbol;Acc:MGI:3836967]
76. Prkaa1 ENSMUSG00000050697 591 0.757 - - - - - 0.757 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
77. Lgr5 ENSMUSG00000020140 516 0.757 - - - - - 0.757 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
78. Trim27 ENSMUSG00000021326 6617 0.756 - 0.756 - - - - tripartite motif-containing 27 [Source:MGI Symbol;Acc:MGI:97904]
79. Hddc3 ENSMUSG00000030532 213 0.756 - - - - - 0.756 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
80. Ctla2a ENSMUSG00000044258 507 0.755 - - - - - 0.755 cytotoxic T lymphocyte-associated protein 2 alpha [Source:MGI Symbol;Acc:MGI:88554]
81. Ftx ENSMUSG00000086370 285 0.755 - - - - - 0.755 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
82. Cdc16 ENSMUSG00000038416 7042 0.755 - - - - - 0.755 CDC16 cell division cycle 16 [Source:MGI Symbol;Acc:MGI:1917207]
83. Ppt2 ENSMUSG00000015474 321 0.755 - - - - - 0.755 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
84. Slc7a6 ENSMUSG00000031904 1103 0.754 - - - - - 0.754 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
85. Acsl6 ENSMUSG00000020333 249 0.754 - - - - - 0.754 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
86. Ttc7 ENSMUSG00000036918 154 0.754 - - - - - 0.754 tetratricopeptide repeat domain 7 [Source:MGI Symbol;Acc:MGI:1920999]
87. Arih1 ENSMUSG00000025234 3800 0.754 - - - - - 0.754 ariadne RBR E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1344363]
88. Ufsp1 ENSMUSG00000051502 251 0.754 - - - - - 0.754 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
89. Rufy2 ENSMUSG00000020070 1150 0.753 - - - - - 0.753 RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
90. Pdss2 ENSMUSG00000038240 749 0.753 - - - - - 0.753 prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615]
91. Cdca8 ENSMUSG00000028873 5637 0.752 - - - - - 0.752 cell division cycle associated 8 [Source:MGI Symbol;Acc:MGI:1196274]
92. Paxbp1 ENSMUSG00000022974 322 0.752 - - - - - 0.752 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
93. Tmx3 ENSMUSG00000024614 1503 0.752 - - 0.752 - - - thioredoxin-related transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:2442418]
94. Cish ENSMUSG00000032578 239 0.752 - - - - - 0.752 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
95. Mtdh ENSMUSG00000022255 4882 0.751 - - - - - 0.751 metadherin [Source:MGI Symbol;Acc:MGI:1914404]
96. Plekha6 ENSMUSG00000041757 451 0.751 - - - - - 0.751 pleckstrin homology domain containing, family A member 6 [Source:MGI Symbol;Acc:MGI:2388662]
97. Homer3 ENSMUSG00000003573 2190 0.751 - - - - - 0.751 homer scaffolding protein 3 [Source:MGI Symbol;Acc:MGI:1347359]
98. Stk25 ENSMUSG00000026277 2131 0.751 - - - - - 0.751 serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
99. Gtf3c6 ENSMUSG00000019837 2716 0.751 - - - - - 0.751 general transcription factor IIIC, polypeptide 6, alpha [Source:MGI Symbol;Acc:MGI:1914621]
100. Cst3 ENSMUSG00000027447 2497 0.751 - - - - - 0.751 cystatin C [Source:MGI Symbol;Acc:MGI:102519]

There are 144 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA