Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smim4

Gene Name Gene ID Reads Annotation
Smim4 ENSMUSG00000058351 454 small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]







Genes with expression patterns similar to Smim4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smim4 ENSMUSG00000058351 454 6 1.000 1.000 1.000 1.000 1.000 1.000 small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
2. Plekhm1 ENSMUSG00000034247 251 1.723 - 0.989 - 0.734 - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
3. Strn ENSMUSG00000024077 1056 1.691 - 0.930 - 0.761 - - striatin, calmodulin binding protein [Source:MGI Symbol;Acc:MGI:1333757]
4. Zfp157 ENSMUSG00000036898 1185 1.654 - 0.952 - 0.702 - - zinc finger protein 157 [Source:MGI Symbol;Acc:MGI:1919404]
5. Wdhd1 ENSMUSG00000037572 1951 1.638 - 0.915 - 0.723 - - WD repeat and HMG-box DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:2443514]
6. Nudt22 ENSMUSG00000037349 246 1.579 - - 0.773 0.806 - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:MGI Symbol;Acc:MGI:1915573]
7. Vasn ENSMUSG00000039646 1210 1.485 - 0.706 - 0.779 - - vasorin [Source:MGI Symbol;Acc:MGI:2177651]
8. Ap2a1 ENSMUSG00000060279 108 0.995 - 0.995 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
9. Usp35 ENSMUSG00000035713 112 0.995 - 0.995 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
10. Extl1 ENSMUSG00000028838 63 0.995 - 0.995 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
11. Rpl27-ps2 ENSMUSG00000082171 89 0.995 - 0.995 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
12. Pdpr ENSMUSG00000033624 123 0.995 - 0.995 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
13. Ptges3l ENSMUSG00000097487 146 0.995 - 0.995 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
14. Cyp27a1 ENSMUSG00000026170 153 0.994 - 0.994 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
15. Zfp71-rs1 Zfp71-rs1 629 0.993 - 0.993 - - - -
16. Rab11fip5 ENSMUSG00000051343 496 0.993 - 0.993 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
17. Klhl6 ENSMUSG00000043008 952 0.993 - 0.993 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
18. Smpd3 ENSMUSG00000031906 194 0.993 - 0.993 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
19. Kcnk5 ENSMUSG00000023243 191 0.993 - 0.993 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
20. Ppp4r4 ENSMUSG00000021209 242 0.992 - 0.992 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
21. Cd302 ENSMUSG00000060703 214 0.992 - 0.992 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
22. Rbm12b1 ENSMUSG00000046667 331 0.992 - 0.992 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
23. Slc38a3 ENSMUSG00000010064 147 0.992 - 0.992 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
24. Pabpc4l ENSMUSG00000090919 1259 0.991 - 0.991 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
25. Cetn4 ENSMUSG00000045031 377 0.991 - 0.991 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
26. Gm25734 Gm25734 104 0.991 - 0.991 - - - -
27. Zbtb12 ENSMUSG00000049823 373 0.99 - 0.990 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
28. Zfp11 ENSMUSG00000051034 218 0.989 - 0.989 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
29. Tmem26 ENSMUSG00000060044 379 0.989 - 0.989 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
30. AK129341 AK129341 204 0.988 - 0.988 - - - -
31. Frk ENSMUSG00000019779 639 0.988 - 0.988 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
32. Car8 ENSMUSG00000041261 286 0.987 - 0.987 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
33. Harbi1 ENSMUSG00000027243 348 0.987 - 0.987 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
34. Gmds ENSMUSG00000038372 653 0.986 - 0.986 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
35. Dhx34 ENSMUSG00000006019 240 0.986 - 0.986 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
36. Gm12942 332 0.985 - 0.985 - - - - predicted gene 12942
37. Suclg2 ENSMUSG00000061838 465 0.984 - 0.984 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
38. Inadl 509 0.984 - 0.984 - - - - InaD-like (Drosophila), transcript variant X9
39. Pla2g15 ENSMUSG00000031903 321 0.984 - 0.984 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
40. Tmem135 ENSMUSG00000039428 946 0.983 - 0.983 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
41. Dact2 ENSMUSG00000048826 163 0.983 - 0.983 - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:MGI Symbol;Acc:MGI:1920347]
42. Mcc ENSMUSG00000071856 4024 0.983 - 0.983 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
43. Gm7327 ENSMUSG00000050900 249 0.983 - 0.983 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
44. Apoo ENSMUSG00000079508 815 0.981 - 0.981 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
45. Gm26782 ENSMUSG00000097431 428 0.98 - 0.980 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
46. 2210408I21Rik ENSMUSG00000071252 189 0.98 - 0.980 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
47. Mical2 ENSMUSG00000038244 295 0.979 - 0.979 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
48. Gm25735 ENSMUSG00000092905 617 0.979 - 0.979 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
49. 0610009B22Rik ENSMUSG00000007777 752 0.979 - 0.979 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
50. Atg3 ENSMUSG00000022663 1323 0.979 - 0.979 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
51. Zfp865 ENSMUSG00000074405 1223 0.978 - 0.978 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
52. Gmppa ENSMUSG00000033021 462 0.978 - 0.978 - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
53. 2010111I01Rik ENSMUSG00000021458 591 0.977 - 0.977 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
54. Zfp707 ENSMUSG00000034429 447 0.977 - 0.977 - - - - zinc finger protein 707 [Source:MGI Symbol;Acc:MGI:1916270]
55. Bckdha ENSMUSG00000060376 653 0.976 - 0.976 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
56. 2610035D17Rik ENSMUSG00000087259 651 0.976 - 0.976 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
57. Wdr46 ENSMUSG00000024312 449 0.976 - 0.976 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
58. Aldh6a1 ENSMUSG00000021238 522 0.976 - 0.976 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
59. Nradd ENSMUSG00000032491 668 0.975 - 0.975 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
60. Cbfa2t3 ENSMUSG00000006362 817 0.974 - 0.974 - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
61. Tnfrsf1a ENSMUSG00000030341 711 0.974 - 0.974 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
62. Tmem246 ENSMUSG00000039611 866 0.974 - 0.974 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
63. Tmem186 ENSMUSG00000043140 711 0.972 - 0.972 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
64. Ubtd1 ENSMUSG00000025171 336 0.972 - 0.972 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
65. Decr2 ENSMUSG00000036775 1047 0.971 - 0.971 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
66. Tmem176a ENSMUSG00000023367 831 0.97 - 0.970 - - - - transmembrane protein 176A [Source:MGI Symbol;Acc:MGI:1913308]
67. Fbxo25 ENSMUSG00000038365 940 0.969 - 0.969 - - - - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
68. Twf2 ENSMUSG00000023277 849 0.969 - 0.969 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
69. Gm9790 ENSMUSG00000044330 390 0.969 - 0.969 - - - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
70. Ing2 ENSMUSG00000063049 913 0.969 - 0.969 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
71. Pom121 ENSMUSG00000053293 574 0.968 - 0.968 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
72. Tmem126b ENSMUSG00000030614 743 0.968 - 0.968 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
73. Ift88 ENSMUSG00000040040 557 0.968 - 0.968 - - - - intraflagellar transport 88 [Source:MGI Symbol;Acc:MGI:98715]
74. Gm4944 968 0.968 - 0.968 - - - - predicted gene 4944
75. Hist1h3c ENSMUSG00000069310 508 0.967 - 0.967 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
76. Cxxc4 ENSMUSG00000044365 723 0.967 - 0.967 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
77. Gm5776 ENSMUSG00000099647 589 0.966 - 0.966 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
78. Syne4 ENSMUSG00000019737 724 0.966 - 0.966 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
79. Myadm ENSMUSG00000068566, ENSMUSG00000097829 710 0.966 - 0.966 - - - - myeloid-associated differentiation marker [Source:NCBI gene;Acc:50918]
80. S100a16 ENSMUSG00000074457 1007 0.965 - 0.965 - - - - S100 calcium binding protein A16 [Source:MGI Symbol;Acc:MGI:1915110]
81. Dync2h1 ENSMUSG00000047193 880 0.965 - 0.965 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:MGI Symbol;Acc:MGI:107736]
82. Prkag1 ENSMUSG00000067713 1318 0.964 - 0.964 - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
83. 3110052M02Rik 376 0.964 - 0.964 - - - - RIKEN cDNA 3110052M02 gene, transcript variant X10
84. Rhbdf1 ENSMUSG00000020282 1113 0.963 - 0.963 - - - - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
85. Hsdl2 ENSMUSG00000028383 1294 0.962 - 0.962 - - - - hydroxysteroid dehydrogenase like 2 [Source:MGI Symbol;Acc:MGI:1919729]
86. Cars2 ENSMUSG00000056228 492 0.962 - 0.962 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
87. AW146154 ENSMUSG00000074166 587 0.962 - 0.962 - - - - expressed sequence AW146154 [Source:MGI Symbol;Acc:MGI:2142212]
88. Btbd9 ENSMUSG00000062202 1289 0.961 - 0.961 - - - - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
89. Coa6 ENSMUSG00000051671 731 0.961 - 0.961 - - - - cytochrome c oxidase assembly factor 6 [Source:MGI Symbol;Acc:MGI:1915142]
90. Ccne1 ENSMUSG00000002068 2574 0.961 - 0.961 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
91. Gm26981 ENSMUSG00000098041 717 0.961 - 0.961 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
92. Rin2 ENSMUSG00000001768 996 0.96 - 0.960 - - - - Ras and Rab interactor 2 [Source:MGI Symbol;Acc:MGI:1921280]
93. Osbpl2 ENSMUSG00000039050 960 0.96 - 0.960 - - - - oxysterol binding protein-like 2 [Source:MGI Symbol;Acc:MGI:2442832]
94. Uvrag ENSMUSG00000035354 908 0.96 - 0.960 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
95. Zfp369 ENSMUSG00000021514 1130 0.959 - 0.959 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
96. Sik2 ENSMUSG00000037112 1369 0.957 - 0.957 - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
97. Fam57a ENSMUSG00000069808 616 0.956 - 0.956 - - - - family with sequence similarity 57, member A [Source:MGI Symbol;Acc:MGI:2151840]
98. S1pr2 ENSMUSG00000043895 1027 0.956 - 0.956 - - - - sphingosine-1-phosphate receptor 2 [Source:MGI Symbol;Acc:MGI:99569]
99. Usp38 ENSMUSG00000038250 1125 0.954 - 0.954 - - - - ubiquitin specific peptidase 38 [Source:MGI Symbol;Acc:MGI:1922091]
100. Trim8 ENSMUSG00000025034 1494 0.954 - 0.954 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]

There are 355 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA