Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smim20

Gene Name Gene ID Reads Annotation
Smim20 ENSMUSG00000061461 2966 small integral membrane protein 20 [Source:MGI Symbol;Acc:MGI:1913528]







Genes with expression patterns similar to Smim20

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smim20 ENSMUSG00000061461 2966 6 1.000 1.000 1.000 1.000 1.000 1.000 small integral membrane protein 20 [Source:MGI Symbol;Acc:MGI:1913528]
2. Fam134a 688 0.844 0.844 - - - - - family with sequence similarity 134, member A, transcript variant 1
3. Bloc1s4 ENSMUSG00000060708 964 0.841 0.841 - - - - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:MGI Symbol;Acc:MGI:1929230]
4. Plekha3 ENSMUSG00000002733 1222 0.838 0.838 - - - - - pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 [Source:MGI Symbol;Acc:MGI:1932515]
5. Epb4.1l3 Epb4.1l3 4534 0.834 0.834 - - - - -
6. Pex19 ENSMUSG00000003464 2015 0.831 0.831 - - - - - peroxisomal biogenesis factor 19 [Source:MGI Symbol;Acc:MGI:1334458]
7. Prmt10 Prmt10 1174 0.83 0.830 - - - - -
8. Rnf7 ENSMUSG00000051234 6537 0.828 0.828 - - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
9. Ikzf5 ENSMUSG00000040167 2156 0.824 0.824 - - - - - IKAROS family zinc finger 5 [Source:MGI Symbol;Acc:MGI:1914393]
10. 1700052N19Rik 1700052N19Rik 913 0.823 0.823 - - - - -
11. Gns ENSMUSG00000034707 1872 0.823 0.823 - - - - - glucosamine (N-acetyl)-6-sulfatase [Source:MGI Symbol;Acc:MGI:1922862]
12. A330076H08Rik ENSMUSG00000109321 378 0.819 0.819 - - - - - RIKEN cDNA A330076H08 gene [Source:MGI Symbol;Acc:MGI:2443193]
13. Itfg3 Itfg3 548 0.812 0.812 - - - - -
14. Ext1 ENSMUSG00000061731 1991 0.806 0.806 - - - - - exostoses (multiple) 1 [Source:MGI Symbol;Acc:MGI:894663]
15. Hexim1 ENSMUSG00000048878 1922 0.805 0.805 - - - - - hexamethylene bis-acetamide inducible 1 [Source:MGI Symbol;Acc:MGI:2385923]
16. Thoc1 ENSMUSG00000024287 1683 0.805 0.805 - - - - - THO complex 1 [Source:MGI Symbol;Acc:MGI:1919668]
17. Arcn1 ENSMUSG00000032096 4777 0.804 0.804 - - - - - archain 1 [Source:MGI Symbol;Acc:MGI:2387591]
18. Cpsf3 ENSMUSG00000054309 1861 0.8 0.800 - - - - - cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328]
19. Cdk16 ENSMUSG00000031065 3200 0.799 0.799 - - - - - cyclin-dependent kinase 16 [Source:MGI Symbol;Acc:MGI:97516]
20. Rps13-ps1 ENSMUSG00000066362 2596 0.791 0.791 - - - - - ribosomal protein S13, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3647042]
21. Bace1 ENSMUSG00000032086 1360 0.791 0.791 - - - - - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
22. Rbm34 ENSMUSG00000033931 1425 0.79 0.790 - - - - - RNA binding motif protein 34 [Source:MGI Symbol;Acc:MGI:1098653]
23. Zfp111 ENSMUSG00000087598 877 0.782 0.782 - - - - - zinc finger protein 111 [Source:MGI Symbol;Acc:MGI:1929114]
24. Stoml2 ENSMUSG00000028455 4106 0.778 0.778 - - - - - stomatin (Epb7.2)-like 2 [Source:MGI Symbol;Acc:MGI:1913842]
25. Hnrnph2 ENSMUSG00000045427 6648 0.778 0.778 - - - - - heterogeneous nuclear ribonucleoprotein H2 [Source:MGI Symbol;Acc:MGI:1201779]
26. Zdhhc20 ENSMUSG00000021969 4010 0.771 0.771 - - - - - zinc finger, DHHC domain containing 20 [Source:MGI Symbol;Acc:MGI:1923215]
27. Pcnt ENSMUSG00000001151 1517 0.769 0.769 - - - - - pericentrin (kendrin) [Source:MGI Symbol;Acc:MGI:102722]
28. Snx5 ENSMUSG00000027423 3464 0.767 0.767 - - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
29. KCTD12 KCTD12 1873 0.766 0.766 - - - - -
30. Zfp326 ENSMUSG00000029290 3642 0.758 0.758 - - - - - zinc finger protein 326 [Source:MGI Symbol;Acc:MGI:1927246]
31. Plaa ENSMUSG00000028577 2537 0.755 0.755 - - - - - phospholipase A2, activating protein [Source:MGI Symbol;Acc:MGI:104810]
32. Neo1 ENSMUSG00000032340 4225 0.754 0.754 - - - - - neogenin [Source:MGI Symbol;Acc:MGI:1097159]
33. Sh3bp5 ENSMUSG00000021892 2847 0.754 0.754 - - - - - SH3-domain binding protein 5 (BTK-associated) [Source:MGI Symbol;Acc:MGI:1344391]
34. Adh5 ENSMUSG00000028138 5434 0.754 0.754 - - - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:MGI Symbol;Acc:MGI:87929]
35. Zc3h14 ENSMUSG00000021012 1270 0.752 - - 0.752 - - - zinc finger CCCH type containing 14 [Source:MGI Symbol;Acc:MGI:1919824]
36. Ankrd46 ENSMUSG00000048307 3171 0.75 0.750 - - - - - ankyrin repeat domain 46 [Source:MGI Symbol;Acc:MGI:1916089]
37. 4632434I11Rik 4632434I11Rik 951 0.747 0.747 - - - - -
38. Tmx3 ENSMUSG00000024614 1503 0.742 0.742 - - - - - thioredoxin-related transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:2442418]
39. Dctpp1 ENSMUSG00000042462 2914 0.742 0.742 - - - - - dCTP pyrophosphatase 1 [Source:MGI Symbol;Acc:MGI:1913672]
40. Mier1 ENSMUSG00000028522 1970 0.74 0.740 - - - - - MEIR1 treanscription regulator [Source:MGI Symbol;Acc:MGI:1918398]
41. Pitpna ENSMUSG00000017781 2845 0.738 0.738 - - - - - phosphatidylinositol transfer protein, alpha [Source:MGI Symbol;Acc:MGI:99887]
42. Chtop ENSMUSG00000001017 4591 0.734 0.734 - - - - - chromatin target of PRMT1 [Source:MGI Symbol;Acc:MGI:1913761]
43. Dis3l ENSMUSG00000032396 662 0.731 0.731 - - - - - DIS3 like exosome 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:2143272]
44. Evi5 ENSMUSG00000011831 4158 0.729 0.729 - - - - - ecotropic viral integration site 5 [Source:MGI Symbol;Acc:MGI:104736]
45. Zfp513 ENSMUSG00000043059 2452 0.727 0.727 - - - - - zinc finger protein 513 [Source:MGI Symbol;Acc:MGI:2141255]
46. Zcchc14 ENSMUSG00000061410 1142 0.727 0.727 - - - - - zinc finger, CCHC domain containing 14 [Source:MGI Symbol;Acc:MGI:2159407]
47. Timm17b ENSMUSG00000031158 3710 0.726 0.726 - - - - - translocase of inner mitochondrial membrane 17b [Source:MGI Symbol;Acc:MGI:1343176]
48. Tyms ENSMUSG00000025747 4336 0.724 0.724 - - - - - thymidylate synthase [Source:MGI Symbol;Acc:MGI:98878]
49. Kdr ENSMUSG00000062960 2133 0.722 0.722 - - - - - kinase insert domain protein receptor [Source:MGI Symbol;Acc:MGI:96683]
50. Pdia3 ENSMUSG00000027248 2594 0.721 0.721 - - - - - protein disulfide isomerase associated 3 [Source:MGI Symbol;Acc:MGI:95834]
51. Phf23 ENSMUSG00000018572 3699 0.712 0.712 - - - - - PHD finger protein 23 [Source:MGI Symbol;Acc:MGI:1925496]
52. Rmi1 ENSMUSG00000035367 647 0.708 0.708 - - - - - RecQ mediated genome instability 1 [Source:MGI Symbol;Acc:MGI:1921636]
53. Sec13 ENSMUSG00000030298 6539 0.707 - 0.707 - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:MGI Symbol;Acc:MGI:99832]
54. Errfi1 ENSMUSG00000028967 511 0.706 - - 0.706 - - - ERBB receptor feedback inhibitor 1 [Source:MGI Symbol;Acc:MGI:1921405]
55. Acap2 ENSMUSG00000049076 1853 0.706 0.706 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:MGI Symbol;Acc:MGI:1925868]
56. Hras ENSMUSG00000025499 4044 0.706 0.706 - - - - - Harvey rat sarcoma virus oncogene [Source:MGI Symbol;Acc:MGI:96224]
57. Ppp1r12a ENSMUSG00000019907 2010 0.705 0.705 - - - - - protein phosphatase 1, regulatory subunit 12A [Source:MGI Symbol;Acc:MGI:1309528]
58. Zfp617 ENSMUSG00000066880 2412 0.702 0.702 - - - - - zinc finger protein 617 [Source:MGI Symbol;Acc:MGI:2684459]
59. Pcnp ENSMUSG00000071533 6314 0.701 0.701 - - - - - PEST proteolytic signal containing nuclear protein [Source:MGI Symbol;Acc:MGI:1923552]
60. Sfmbt1 ENSMUSG00000006527 1043 0.701 0.701 - - - - - Scm-like with four mbt domains 1 [Source:MGI Symbol;Acc:MGI:1859609]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA