Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smg6

Gene Name Gene ID Reads Annotation
Smg6 ENSMUSG00000038290 507 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2144117]







Genes with expression patterns similar to Smg6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smg6 ENSMUSG00000038290 507 6 1.000 1.000 1.000 1.000 1.000 1.000 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2144117]
2. Gm12033 ENSMUSG00000078965 31 0.778 - - - - - 0.778 predicted gene 12033 [Source:MGI Symbol;Acc:MGI:3650772]
3. Gm5436 ENSMUSG00000042962 199 0.77 - 0.770 - - - - predicted pseudogene 5436 [Source:MGI Symbol;Acc:MGI:3643291]
4. Gm9006 ENSMUSG00000079359 77 0.763 - 0.763 - - - - predicted gene 9006 [Source:MGI Symbol;Acc:MGI:3644004]
5. Cbr4 ENSMUSG00000031641 574 0.763 - - - - - 0.763 carbonyl reductase 4 [Source:MGI Symbol;Acc:MGI:2384567]
6. Ric3 ENSMUSG00000048330 247 0.747 - 0.747 - - - - RIC3 acetylcholine receptor chaperone [Source:MGI Symbol;Acc:MGI:2443887]
7. Lrwd1 ENSMUSG00000029703 543 0.745 - 0.745 - - - - leucine-rich repeats and WD repeat domain containing 1 [Source:MGI Symbol;Acc:MGI:1918985]
8. Cebpb ENSMUSG00000056501 245 0.738 - 0.738 - - - - CCAAT/enhancer binding protein (C/EBP), beta [Source:MGI Symbol;Acc:MGI:88373]
9. Abtb1 ENSMUSG00000030083 222 0.735 - 0.735 - - - - ankyrin repeat and BTB (POZ) domain containing 1 [Source:MGI Symbol;Acc:MGI:1933148]
10. Gm8129 ENSMUSG00000059159 76 0.734 - 0.734 - - - - predicted pseudogene 8129 [Source:MGI Symbol;Acc:MGI:3646863]
11. Fam101a 106 0.732 - 0.732 - - - - family with sequence similarity 101, member A
12. Tsen2 ENSMUSG00000042389 639 0.73 - - 0.730 - - - tRNA splicing endonuclease subunit 2 [Source:MGI Symbol;Acc:MGI:2141599]
13. Clasp2 ENSMUSG00000033392 1535 0.729 - 0.729 - - - - CLIP associating protein 2 [Source:MGI Symbol;Acc:MGI:1923749]
14. Gm12577 ENSMUSG00000083834 78 0.727 - 0.727 - - - - predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
15. Chmp7 ENSMUSG00000034190 1190 0.727 - - - - - 0.727 charged multivesicular body protein 7 [Source:MGI Symbol;Acc:MGI:1913922]
16. Crlf2 ENSMUSG00000033467 305 0.727 - - - - - 0.727 cytokine receptor-like factor 2 [Source:MGI Symbol;Acc:MGI:1889506]
17. Gm22767 ENSMUSG00000088990 25 0.726 - 0.726 - - - - predicted gene, 22767 [Source:MGI Symbol;Acc:MGI:5452544]
18. Gm12657 ENSMUSG00000063314 79 0.726 - 0.726 - - - - predicted gene 12657 [Source:MGI Symbol;Acc:MGI:3651714]
19. Ribc1 ENSMUSG00000025257 87 0.724 - 0.724 - - - - RIB43A domain with coiled-coils 1 [Source:MGI Symbol;Acc:MGI:1913861]
20. 1810062O18Rik ENSMUSG00000084925 34 0.724 - 0.724 - - - - RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
21. Gm25776 ENSMUSG00000080365 59 0.722 - 0.722 - - - - predicted gene, 25776 [Source:MGI Symbol;Acc:MGI:5455553]
22. Hoxd11 ENSMUSG00000042499 16 0.722 - 0.722 - - - - homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
23. Gm10155 ENSMUSG00000066180 21 0.719 - 0.719 - - - - predicted gene 10155 [Source:MGI Symbol;Acc:MGI:3642914]
24. Gfod1 ENSMUSG00000051335 46 0.718 - 0.718 - - - - glucose-fructose oxidoreductase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145304]
25. Gm12198 ENSMUSG00000085564 18 0.716 - 0.716 - - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
26. Gm16221 ENSMUSG00000082234 99 0.715 - 0.715 - - - - predicted gene 16221 [Source:MGI Symbol;Acc:MGI:3802147]
27. Ak5 ENSMUSG00000039058 89 0.714 - 0.714 - - - - adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
28. Aste1 ENSMUSG00000032567 469 0.714 - 0.714 - - - - asteroid homolog 1 [Source:MGI Symbol;Acc:MGI:1913845]
29. 2310007B03Rik ENSMUSG00000034159 31 0.714 - 0.714 - - - - RIKEN cDNA 2310007B03 gene [Source:MGI Symbol;Acc:MGI:1919124]
30. 1700112E06Rik 52 0.714 - 0.714 - - - - RIKEN cDNA 1700112E06 gene, transcript variant X4
31. Sfxn3 ENSMUSG00000025212 825 0.714 - 0.714 - - - - sideroflexin 3 [Source:MGI Symbol;Acc:MGI:2137679]
32. 6030443J06Rik ENSMUSG00000097207 38 0.713 - 0.713 - - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
33. Gm12367 ENSMUSG00000084828 11 0.711 - 0.711 - - - - predicted gene 12367 [Source:MGI Symbol;Acc:MGI:3649554]
34. Gm17108 ENSMUSG00000091133 29 0.711 - 0.711 - - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
35. 9130230N09Rik ENSMUSG00000092626 12 0.711 - 0.711 - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
36. Myo1f ENSMUSG00000024300 181 0.711 - 0.711 - - - - myosin IF [Source:MGI Symbol;Acc:MGI:107711]
37. Il1r2 ENSMUSG00000026073 26 0.711 - 0.711 - - - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
38. Gm16020 ENSMUSG00000072576 11 0.711 - 0.711 - - - - predicted gene 16020 [Source:MGI Symbol;Acc:MGI:3801865]
39. Irs3 ENSMUSG00000047182 11 0.711 - 0.711 - - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
40. Prl2c1 ENSMUSG00000062551 9 0.711 - 0.711 - - - - Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
41. Pate2 ENSMUSG00000074452 74 0.71 - 0.710 - - - - prostate and testis expressed 2 [Source:MGI Symbol;Acc:MGI:2685692]
42. Gm2026 ENSMUSG00000078886 27 0.71 - 0.710 - - - - predicted gene 2026 [Source:MGI Symbol;Acc:MGI:3780195]
43. C030013C21Rik ENSMUSG00000085078 24 0.709 - 0.709 - - - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
44. Il17re ENSMUSG00000043088 116 0.709 - - - - - 0.709 interleukin 17 receptor E [Source:MGI Symbol;Acc:MGI:1889371]
45. Gm15401 ENSMUSG00000072999 54 0.709 - 0.709 - - - - predicted gene 15401 [Source:MGI Symbol;Acc:MGI:3642201]
46. Hist2h2be ENSMUSG00000068854 501 0.708 - 0.708 - - - - histone cluster 2, H2be [Source:MGI Symbol;Acc:MGI:2448415]
47. 4921508A21Rik 4921508A21Rik 45 0.707 - - - - - 0.707
48. L3mbtl2 ENSMUSG00000022394 583 0.704 - 0.704 - - - - L3MBTL2 polycomb repressive complex 1 subunit [Source:MGI Symbol;Acc:MGI:2443584]
49. Rab13 ENSMUSG00000027935 658 0.704 - 0.704 - - - - RAB13, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1927232]
50. Sez6 ENSMUSG00000000632 145 0.703 - 0.703 - - - - seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]
51. Stat3 ENSMUSG00000004040 1514 0.703 - 0.703 - - - - signal transducer and activator of transcription 3 [Source:MGI Symbol;Acc:MGI:103038]
52. 5930422O12Rik ENSMUSG00000048544 74 0.702 - 0.702 - - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
53. Gm5595 249 0.701 - 0.701 - - - - predicted gene 5595
54. Gm10736 ENSMUSG00000096842 39 0.701 - 0.701 - - - - predicted gene 10736 [Source:MGI Symbol;Acc:MGI:3704412]
55. AA474331 AA474331 111 0.7 - 0.700 - - - -
56. MIMT1 MIMT1 23 0.7 - 0.700 - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA