Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smg1

Gene Name Gene ID Reads Annotation
Smg1 ENSMUSG00000030655 6079 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:MGI Symbol;Acc:MGI:1919742]







Genes with expression patterns similar to Smg1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smg1 ENSMUSG00000030655 6079 6 1.000 1.000 1.000 1.000 1.000 1.000 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:MGI Symbol;Acc:MGI:1919742]
2. Ppm1d ENSMUSG00000020525 1303 1.727 - 0.839 - - - 0.888 protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
3. Bbs2 ENSMUSG00000031755 976 1.708 - 0.851 - - - 0.857 Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
4. 2810408I11Rik ENSMUSG00000087213 916 1.697 - 0.825 - - - 0.872 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
5. Ubap1 ENSMUSG00000028437 2702 1.66 - 0.786 - - - 0.874 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
6. Ict1 1397 1.648 - 0.786 - - - 0.862 immature colon carcinoma transcript 1, transcript variant X1
7. Mapk1 ENSMUSG00000063358 8354 1.648 - 0.840 - - - 0.808 mitogen-activated protein kinase 1 [Source:MGI Symbol;Acc:MGI:1346858]
8. Trp53bp1 ENSMUSG00000043909 1824 1.646 - 0.782 - - - 0.864 transformation related protein 53 binding protein 1 [Source:MGI Symbol;Acc:MGI:1351320]
9. Supt4a ENSMUSG00000020485 3703 1.622 - 0.754 - - - 0.868 suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
10. Purb ENSMUSG00000094483 10153 1.62 - 0.767 - - - 0.853 purine rich element binding protein B [Source:MGI Symbol;Acc:MGI:1338779]
11. Wdr61 ENSMUSG00000061559 3705 1.612 - 0.822 - - - 0.790 WD repeat domain 61 [Source:MGI Symbol;Acc:MGI:1917493]
12. Sh3pxd2a ENSMUSG00000053617 2528 1.572 - 0.750 - - - 0.822 SH3 and PX domains 2A [Source:MGI Symbol;Acc:MGI:1298393]
13. Dhx9 ENSMUSG00000042699 8779 1.51 0.702 - - - - 0.808 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
14. Nsa2 ENSMUSG00000060739 12091 1.501 - 0.737 - - - 0.764 NSA2 ribosome biogenesis homolog [Source:MGI Symbol;Acc:MGI:1913883]
15. Tsnax ENSMUSG00000056820 4417 1.448 - 0.704 - - - 0.744 translin-associated factor X [Source:MGI Symbol;Acc:MGI:1855672]
16. Pnpla2 ENSMUSG00000025509 905 0.907 - - - - - 0.907 patatin-like phospholipase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914103]
17. Flii ENSMUSG00000002812 1382 0.904 - - - - - 0.904 flightless I actin binding protein [Source:MGI Symbol;Acc:MGI:1342286]
18. Kcmf1 ENSMUSG00000055239 3956 0.904 - - - - - 0.904 potassium channel modulatory factor 1 [Source:MGI Symbol;Acc:MGI:1921537]
19. Gemin5 ENSMUSG00000037275 1605 0.901 - - - - - 0.901 gem nuclear organelle associated protein 5 [Source:MGI Symbol;Acc:MGI:2449311]
20. Sf3a3 ENSMUSG00000028902 4797 0.9 - - - - - 0.900 splicing factor 3a, subunit 3 [Source:MGI Symbol;Acc:MGI:1922312]
21. Nt5m ENSMUSG00000032615 855 0.897 - - - - - 0.897 5',3'-nucleotidase, mitochondrial [Source:MGI Symbol;Acc:MGI:1917127]
22. Nup85 ENSMUSG00000020739 1994 0.896 - - - - - 0.896 nucleoporin 85 [Source:MGI Symbol;Acc:MGI:3046173]
23. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.895 - - - - - 0.895 autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
24. Gnpat ENSMUSG00000031985 3628 0.893 - - - - - 0.893 glyceronephosphate O-acyltransferase [Source:MGI Symbol;Acc:MGI:1343460]
25. Pik3c2a ENSMUSG00000030660 2527 0.893 - - - - - 0.893 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha [Source:MGI Symbol;Acc:MGI:1203729]
26. Arid3b ENSMUSG00000004661 2972 0.892 - - - - - 0.892 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
27. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 6507 0.891 - - - - - 0.891 ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
28. Fryl ENSMUSG00000070733 1717 0.89 - - - - - 0.890 FRY like transcription coactivator [Source:MGI Symbol;Acc:MGI:1919563]
29. Eif3d ENSMUSG00000016554 3167 0.89 - - - - - 0.890 eukaryotic translation initiation factor 3, subunit D [Source:MGI Symbol;Acc:MGI:1933181]
30. Cks2 ENSMUSG00000062248 15997 0.888 - - - - - 0.888 CDC28 protein kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1913447]
31. Tstd3 ENSMUSG00000028251 1160 0.887 - - - - - 0.887 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
32. Usp42 ENSMUSG00000051306 1252 0.887 - - - - - 0.887 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
33. Trim23 ENSMUSG00000021712 798 0.887 - - - - - 0.887 tripartite motif-containing 23 [Source:MGI Symbol;Acc:MGI:1933161]
34. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.886 - - - - - 0.886 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
35. Vcp ENSMUSG00000028452 20841 0.886 - - - - - 0.886 valosin containing protein [Source:MGI Symbol;Acc:MGI:99919]
36. Gm16344 ENSMUSG00000084824 377 0.886 - - - - - 0.886 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
37. Adm ENSMUSG00000030790 312 0.886 - - - - - 0.886 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
38. Atp6v0c ENSMUSG00000024121 107 0.885 - - - - - 0.885 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
39. Dnajc21 ENSMUSG00000044224 1073 0.885 - - - - - 0.885 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
40. Inpp5b ENSMUSG00000028894 575 0.885 - - - - - 0.885 inositol polyphosphate-5-phosphatase B [Source:MGI Symbol;Acc:MGI:103257]
41. 4632415L05Rik ENSMUSG00000048106 222 0.885 - - - - - 0.885 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
42. Ccdc68 ENSMUSG00000038903 129 0.885 - - - - - 0.885 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
43. Gm15966 ENSMUSG00000085865 150 0.884 - - - - - 0.884 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
44. Stk11 ENSMUSG00000003068 745 0.884 - - - - - 0.884 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
45. Zfp687 ENSMUSG00000019338 583 0.883 - - - - - 0.883 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
46. Rragd ENSMUSG00000028278 762 0.883 - - - - - 0.883 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
47. Coq10a ENSMUSG00000039914 324 0.883 - - - - - 0.883 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
48. Xk ENSMUSG00000015342 218 0.883 - - - - - 0.883 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
49. Myo9b ENSMUSG00000004677 902 0.883 - - - - - 0.883 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
50. Pdhx ENSMUSG00000010914 1382 0.882 - - - - - 0.882 pyruvate dehydrogenase complex, component X [Source:MGI Symbol;Acc:MGI:1351627]
51. Tmub1 ENSMUSG00000028958 444 0.882 - - - - - 0.882 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
52. Caskin2 ENSMUSG00000034471 316 0.882 - - - - - 0.882 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
53. Prrg2 ENSMUSG00000007837 453 0.882 - - - - - 0.882 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]
54. Smco4 ENSMUSG00000058173 1242 0.881 - - - - - 0.881 single-pass membrane protein with coiled-coil domains 4 [Source:MGI Symbol;Acc:MGI:3039636]
55. Pon2 ENSMUSG00000032667 1139 0.881 - - - - - 0.881 paraoxonase 2 [Source:MGI Symbol;Acc:MGI:106687]
56. Syvn1 ENSMUSG00000024807 910 0.881 - - - - - 0.881 synovial apoptosis inhibitor 1, synoviolin [Source:MGI Symbol;Acc:MGI:1921376]
57. Ndufaf1 ENSMUSG00000027305 1276 0.881 - - - - - 0.881 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:MGI Symbol;Acc:MGI:1916952]
58. Plk3 ENSMUSG00000028680 442 0.881 - - - - - 0.881 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
59. Gm5879 ENSMUSG00000068262 1572 0.88 - 0.880 - - - - predicted gene 5879 [Source:MGI Symbol;Acc:MGI:3647624]
60. Vps26a ENSMUSG00000020078 2166 0.88 - - - - - 0.880 VPS26 retromer complex component A [Source:MGI Symbol;Acc:MGI:1353654]
61. Cluh ENSMUSG00000020741 2350 0.88 - - - - - 0.880 clustered mitochondria (cluA/CLU1) homolog [Source:MGI Symbol;Acc:MGI:1921398]
62. Mfng ENSMUSG00000018169 425 0.88 - - - - - 0.880 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
63. Fbxl6 ENSMUSG00000022559 1084 0.879 - - - - - 0.879 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
64. Ptx3 ENSMUSG00000027832 735 0.878 - - - - - 0.878 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
65. Dym ENSMUSG00000035765 507 0.878 - - - - - 0.878 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
66. Cdc25c ENSMUSG00000044201 1273 0.878 - - - - - 0.878 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
67. Ablim1 ENSMUSG00000025085 1169 0.878 - - - - - 0.878 actin-binding LIM protein 1 [Source:MGI Symbol;Acc:MGI:1194500]
68. Shroom4 ENSMUSG00000068270 785 0.878 - - - - - 0.878 shroom family member 4 [Source:MGI Symbol;Acc:MGI:2685570]
69. Gnptg ENSMUSG00000035521 519 0.878 - - - - - 0.878 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
70. Kcnmb4 ENSMUSG00000054934 1522 0.878 - - - - - 0.878 potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:MGI Symbol;Acc:MGI:1913272]
71. Acyp1 ENSMUSG00000008822 1101 0.878 - - - - - 0.878 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
72. Rbm12b1 ENSMUSG00000046667 331 0.877 - - - - - 0.877 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
73. Rnf6 ENSMUSG00000029634 1172 0.877 - - - - - 0.877 ring finger protein (C3H2C3 type) 6 [Source:MGI Symbol;Acc:MGI:1921382]
74. Dnpep ENSMUSG00000026209 1821 0.877 - - - - - 0.877 aspartyl aminopeptidase [Source:MGI Symbol;Acc:MGI:1278328]
75. Rexo1 ENSMUSG00000047417 2617 0.877 - - - - - 0.877 REX1, RNA exonuclease 1 [Source:MGI Symbol;Acc:MGI:1914182]
76. Ly6e ENSMUSG00000022587 2572 0.876 - - - - - 0.876 lymphocyte antigen 6 complex, locus E [Source:MGI Symbol;Acc:MGI:106651]
77. Rnf31 ENSMUSG00000047098 530 0.876 - - - - - 0.876 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
78. Fcgrt ENSMUSG00000003420 484 0.876 - - - - - 0.876 Fc receptor, IgG, alpha chain transporter [Source:MGI Symbol;Acc:MGI:103017]
79. Lias ENSMUSG00000029199 3267 0.876 - - - - - 0.876 lipoic acid synthetase [Source:MGI Symbol;Acc:MGI:1934604]
80. Map2k6 ENSMUSG00000020623 623 0.876 - - - - - 0.876 mitogen-activated protein kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1346870]
81. Ccdc104 Ccdc104 1111 0.876 - - - - - 0.876
82. Nufip1 ENSMUSG00000022009 2226 0.875 - - - - - 0.875 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
83. Bcl7b ENSMUSG00000029681 996 0.875 - - - - - 0.875 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
84. Snapin ENSMUSG00000001018 1886 0.875 - - - - - 0.875 SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
85. Zkscan1 ENSMUSG00000029729 2845 0.874 - - - - - 0.874 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
86. Atxn2l ENSMUSG00000032637 1322 0.874 - - - - - 0.874 ataxin 2-like [Source:MGI Symbol;Acc:MGI:2446242]
87. Slco5a1 ENSMUSG00000025938 586 0.874 - - - - - 0.874 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
88. Fh1 ENSMUSG00000026526 1903 0.874 - - - - - 0.874 fumarate hydratase 1 [Source:MGI Symbol;Acc:MGI:95530]
89. Gpn1 ENSMUSG00000064037 2632 0.873 - - - - - 0.873 GPN-loop GTPase 1 [Source:MGI Symbol;Acc:MGI:1921504]
90. Map6 ENSMUSG00000055407 476 0.871 - - - - - 0.871 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
91. Scamp1 ENSMUSG00000021687 1701 0.871 - - - - - 0.871 secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]
92. Mtmr10 ENSMUSG00000030522 476 0.871 - - - - - 0.871 myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
93. Kcnh2 ENSMUSG00000038319 806 0.871 - - - - - 0.871 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
94. Fam160a2 ENSMUSG00000044465 874 0.871 - - - - - 0.871 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
95. Aurka ENSMUSG00000027496 2227 0.871 - 0.871 - - - - aurora kinase A [Source:MGI Symbol;Acc:MGI:894678]
96. Micu1 ENSMUSG00000020111 3859 0.87 - - - - - 0.870 mitochondrial calcium uptake 1 [Source:MGI Symbol;Acc:MGI:2384909]
97. Zfp318 ENSMUSG00000015597 1779 0.869 - - - - - 0.869 zinc finger protein 318 [Source:MGI Symbol;Acc:MGI:1889348]
98. 2700029M09Rik 2700029M09Rik 1474 0.869 - - - - - 0.869
99. Trib1 ENSMUSG00000032501 1194 0.868 - - - - - 0.868 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]
100. Fut8 ENSMUSG00000021065 1066 0.868 - - - - - 0.868 fucosyltransferase 8 [Source:MGI Symbol;Acc:MGI:1858901]

There are 568 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA