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Results for Smc6

Gene Name Gene ID Reads Annotation
Smc6 ENSMUSG00000020608 5466 structural maintenance of chromosomes 6 [Source:MGI Symbol;Acc:MGI:1914491]







Genes with expression patterns similar to Smc6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smc6 ENSMUSG00000020608 5466 6 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 6 [Source:MGI Symbol;Acc:MGI:1914491]
2. Knop1 ENSMUSG00000030980 2926 1.454 0.736 - - - 0.718 - lysine rich nucleolar protein 1 [Source:MGI Symbol;Acc:MGI:1913606]
3. Lsg1 ENSMUSG00000022538 2058 0.844 - - - - 0.844 - large 60S subunit nuclear export GTPase 1 [Source:MGI Symbol;Acc:MGI:107236]
4. Tmem199 ENSMUSG00000051232 1414 0.842 - - - - 0.842 - transmembrane protein 199 [Source:MGI Symbol;Acc:MGI:2144113]
5. Erbb2ip 2336 0.836 - - - - 0.836 - Erbb2 interacting protein, transcript variant 5
6. Phf14 ENSMUSG00000029629 4107 0.828 - - - - 0.828 - PHD finger protein 14 [Source:MGI Symbol;Acc:MGI:1923539]
7. Zbtb43 ENSMUSG00000026788 901 0.826 - - - - 0.826 - zinc finger and BTB domain containing 43 [Source:MGI Symbol;Acc:MGI:1919084]
8. Ndufaf7 ENSMUSG00000024082 1621 0.824 - - - - 0.824 - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:MGI Symbol;Acc:MGI:1920944]
9. Ddx3x ENSMUSG00000000787 27968 0.823 - - 0.823 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
10. Lap3 ENSMUSG00000039682 2895 0.821 - - - - 0.821 - leucine aminopeptidase 3 [Source:MGI Symbol;Acc:MGI:1914238]
11. Top1 ENSMUSG00000070544 27667 0.817 - - 0.817 - - - topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
12. Gle1 ENSMUSG00000019715 2053 0.817 - - - - 0.817 - GLE1 RNA export mediator (yeast) [Source:MGI Symbol;Acc:MGI:1921662]
13. Nckap5 ENSMUSG00000049690 542 0.806 - - - - 0.806 - NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
14. Rock1 ENSMUSG00000024290 4094 0.803 - - 0.803 - - - Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]
15. Mbd2 ENSMUSG00000024513 1500 0.802 - - - - 0.802 - methyl-CpG binding domain protein 2 [Source:MGI Symbol;Acc:MGI:1333813]
16. Fis1 ENSMUSG00000019054 5292 0.798 - 0.798 - - - - fission, mitochondrial 1 [Source:MGI Symbol;Acc:MGI:1913687]
17. Nek7 ENSMUSG00000026393 2327 0.798 - 0.798 - - - - NIMA (never in mitosis gene a)-related expressed kinase 7 [Source:MGI Symbol;Acc:MGI:1890645]
18. Matr3 ENSMUSG00000037236 11220 0.783 - - 0.783 - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
19. Extl2 ENSMUSG00000027963 931 0.782 - - - - 0.782 - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
20. Heatr1 ENSMUSG00000050244 3121 0.78 - - - - 0.780 - HEAT repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442524]
21. Marcksl1 ENSMUSG00000047945 33753 0.778 - - - - 0.778 - MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
22. Exo1 ENSMUSG00000039748 2677 0.777 - 0.777 - - - - exonuclease 1 [Source:MGI Symbol;Acc:MGI:1349427]
23. Ndc80 ENSMUSG00000024056 2132 0.775 - - - - 0.775 - NDC80 kinetochore complex component [Source:MGI Symbol;Acc:MGI:1914302]
24. Rspo4 ENSMUSG00000032852 1928 0.774 - 0.774 - - - - R-spondin 4 [Source:MGI Symbol;Acc:MGI:1924467]
25. Gm9892 ENSMUSG00000052825 6048 0.772 0.772 - - - - - predicted gene 9892 [Source:MGI Symbol;Acc:MGI:3701610]
26. Rps29 ENSMUSG00000034892 5858 0.772 - - - - 0.772 - ribosomal protein S29 [Source:MGI Symbol;Acc:MGI:107681]
27. Dpm2 ENSMUSG00000026810 2344 0.77 - - - - 0.770 - dolichol-phosphate (beta-D) mannosyltransferase 2 [Source:MGI Symbol;Acc:MGI:1330238]
28. Pabpc1 ENSMUSG00000022283 50385 0.77 - - 0.770 - - - poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
29. Tfap2b ENSMUSG00000025927 1305 0.767 - - - - 0.767 - transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
30. Zfhx4 ENSMUSG00000025255 6456 0.765 - - 0.765 - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
31. Arhgap5 ENSMUSG00000035133 1989 0.765 - - 0.765 - - - Rho GTPase activating protein 5 [Source:MGI Symbol;Acc:MGI:1332637]
32. Ube3a ENSMUSG00000025326 5067 0.764 - - 0.764 - - - ubiquitin protein ligase E3A [Source:MGI Symbol;Acc:MGI:105098]
33. Rps2 ENSMUSG00000044533 13115 0.763 0.763 - - - - - ribosomal protein S2 [Source:MGI Symbol;Acc:MGI:105110]
34. Ptp4a1 ENSMUSG00000026064, ENSMUSG00000117310 16237 0.763 - - 0.763 - - - protein tyrosine phosphatase 4a1 [Source:NCBI gene;Acc:19243]
35. Syncrip ENSMUSG00000032423 12993 0.763 0.763 - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]
36. Gm10275 ENSMUSG00000069682 10249 0.762 - - - - 0.762 - predicted pseudogene 10275 [Source:MGI Symbol;Acc:MGI:3704354]
37. Casz1 ENSMUSG00000028977 921 0.762 - - - - 0.762 - castor zinc finger 1 [Source:MGI Symbol;Acc:MGI:1196251]
38. 1110008P14Rik ENSMUSG00000039195 3077 0.76 - 0.760 - - - - RIKEN cDNA 1110008P14 gene [Source:MGI Symbol;Acc:MGI:1920987]
39. Yipf5 ENSMUSG00000024487 11380 0.758 - - 0.758 - - - Yip1 domain family, member 5 [Source:MGI Symbol;Acc:MGI:1914430]
40. Csde1 ENSMUSG00000068823 18265 0.752 - - 0.752 - - - cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
41. Samhd1 ENSMUSG00000027639 3519 0.751 - - - - 0.751 - SAM domain and HD domain, 1 [Source:MGI Symbol;Acc:MGI:1927468]
42. Mir296 ENSMUSG00000065521 1110 0.751 - - - - 0.751 - microRNA 296 [Source:MGI Symbol;Acc:MGI:3619269]
43. Timm9 ENSMUSG00000021079 1699 0.749 - 0.749 - - - - translocase of inner mitochondrial membrane 9 [Source:MGI Symbol;Acc:MGI:1353436]
44. Csnk1g2 ENSMUSG00000003345 2074 0.747 - - - - 0.747 - casein kinase 1, gamma 2 [Source:MGI Symbol;Acc:MGI:1920014]
45. Cacybp ENSMUSG00000014226 13940 0.747 - - 0.747 - - - calcyclin binding protein [Source:MGI Symbol;Acc:MGI:1270839]
46. Ncdn ENSMUSG00000028833 1971 0.746 - 0.746 - - - - neurochondrin [Source:MGI Symbol;Acc:MGI:1347351]
47. Zfp191 Zfp191 3037 0.744 - - - - 0.744 -
48. Rpl22 ENSMUSG00000028936 19132 0.737 - - 0.737 - - - ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:99262]
49. Rnf7 ENSMUSG00000051234 6537 0.737 0.737 - - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
50. Smc4 ENSMUSG00000034349 7290 0.737 - - 0.737 - - - structural maintenance of chromosomes 4 [Source:MGI Symbol;Acc:MGI:1917349]
51. Psma5 ENSMUSG00000068749 4310 0.737 0.737 - - - - - proteasome (prosome, macropain) subunit, alpha type 5 [Source:MGI Symbol;Acc:MGI:1347009]
52. Pbrm1 ENSMUSG00000042323 25383 0.735 - - 0.735 - - - polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
53. Manf ENSMUSG00000032575 6450 0.733 0.733 - - - - - mesencephalic astrocyte-derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:1922090]
54. Prpf40a ENSMUSG00000061136 8476 0.733 - - 0.733 - - - pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]
55. Rspry1 ENSMUSG00000050079 1694 0.732 - 0.732 - - - - ring finger and SPRY domain containing 1 [Source:MGI Symbol;Acc:MGI:1914860]
56. Hnrnph2 ENSMUSG00000045427 6648 0.732 0.732 - - - - - heterogeneous nuclear ribonucleoprotein H2 [Source:MGI Symbol;Acc:MGI:1201779]
57. Wwox ENSMUSG00000004637 564 0.729 - 0.729 - - - - WW domain-containing oxidoreductase [Source:MGI Symbol;Acc:MGI:1931237]
58. Zmym4 ENSMUSG00000042446 4810 0.729 - - - - 0.729 - zinc finger, MYM-type 4 [Source:MGI Symbol;Acc:MGI:1915035]
59. Ccdc50 ENSMUSG00000038127 6532 0.729 0.729 - - - - - coiled-coil domain containing 50 [Source:MGI Symbol;Acc:MGI:1914751]
60. Rfc1 ENSMUSG00000029191 4343 0.729 0.729 - - - - - replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]
61. Mettl1 ENSMUSG00000006732 1290 0.728 - 0.728 - - - - methyltransferase like 1 [Source:MGI Symbol;Acc:MGI:1339986]
62. Ubqln1 ENSMUSG00000005312 6279 0.728 - - - - 0.728 - ubiquilin 1 [Source:MGI Symbol;Acc:MGI:1860276]
63. Cpne3 ENSMUSG00000028228 2016 0.727 - 0.727 - - - - copine III [Source:MGI Symbol;Acc:MGI:1917818]
64. Rbm28 ENSMUSG00000029701 4147 0.727 0.727 - - - - - RNA binding motif protein 28 [Source:MGI Symbol;Acc:MGI:2655711]
65. Anapc2 ENSMUSG00000026965 6472 0.726 - 0.726 - - - - anaphase promoting complex subunit 2 [Source:MGI Symbol;Acc:MGI:2139135]
66. Dhx9 ENSMUSG00000042699 8779 0.726 0.726 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
67. Slc35a4 ENSMUSG00000033272 2623 0.726 - 0.726 - - - - solute carrier family 35, member A4 [Source:MGI Symbol;Acc:MGI:1915093]
68. Etaa1 ENSMUSG00000016984 3070 0.725 - - 0.725 - - - Ewing tumor-associated antigen 1 [Source:MGI Symbol;Acc:MGI:1915395]
69. Sar1a ENSMUSG00000020088 3553 0.725 0.725 - - - - - secretion associated Ras related GTPase 1A [Source:MGI Symbol;Acc:MGI:98230]
70. Serp1 ENSMUSG00000027808 14116 0.725 - - 0.725 - - - stress-associated endoplasmic reticulum protein 1 [Source:MGI Symbol;Acc:MGI:92638]
71. Gm10093 ENSMUSG00000061062 597 0.725 - 0.725 - - - - predicted pseudogene 10093 [Source:MGI Symbol;Acc:MGI:3704479]
72. Foxp2 ENSMUSG00000029563 3505 0.722 - - 0.722 - - - forkhead box P2 [Source:MGI Symbol;Acc:MGI:2148705]
73. Mdc1 ENSMUSG00000061607 1966 0.72 - - - - 0.720 - mediator of DNA damage checkpoint 1 [Source:MGI Symbol;Acc:MGI:3525201]
74. Oaf ENSMUSG00000032014 1301 0.72 - 0.720 - - - - out at first homolog [Source:MGI Symbol;Acc:MGI:94852]
75. Smc2 ENSMUSG00000028312 8888 0.719 - - 0.719 - - - structural maintenance of chromosomes 2 [Source:MGI Symbol;Acc:MGI:106067]
76. Dcun1d5 ENSMUSG00000032002 1674 0.719 - - - - 0.719 - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924113]
77. Zcchc3 ENSMUSG00000074682 8539 0.718 - 0.718 - - - - zinc finger, CCHC domain containing 3 [Source:MGI Symbol;Acc:MGI:1915167]
78. Sptbn1 ENSMUSG00000020315 6814 0.717 - 0.717 - - - - spectrin beta, non-erythrocytic 1 [Source:MGI Symbol;Acc:MGI:98388]
79. Wdr35 ENSMUSG00000066643 640 0.717 - 0.717 - - - - WD repeat domain 35 [Source:MGI Symbol;Acc:MGI:1921932]
80. Helz ENSMUSG00000020721 3743 0.717 0.717 - - - - - helicase with zinc finger domain [Source:MGI Symbol;Acc:MGI:1925705]
81. Bod1 ENSMUSG00000044502 5647 0.716 0.716 - - - - - biorientation of chromosomes in cell division 1 [Source:MGI Symbol;Acc:MGI:1916806]
82. Zbtb5 ENSMUSG00000049657 1113 0.716 - 0.716 - - - - zinc finger and BTB domain containing 5 [Source:MGI Symbol;Acc:MGI:1924601]
83. Atad5 ENSMUSG00000017550 1343 0.715 - - - - 0.715 - ATPase family, AAA domain containing 5 [Source:MGI Symbol;Acc:MGI:2442925]
84. Nsmce2 ENSMUSG00000059586 2346 0.714 - - - - 0.714 - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:MGI Symbol;Acc:MGI:1915751]
85. Zfp462 ENSMUSG00000060206 6068 0.714 - - 0.714 - - - zinc finger protein 462 [Source:MGI Symbol;Acc:MGI:107690]
86. Stoml2 ENSMUSG00000028455 4106 0.713 0.713 - - - - - stomatin (Epb7.2)-like 2 [Source:MGI Symbol;Acc:MGI:1913842]
87. Nmt1 ENSMUSG00000020936 4325 0.713 - 0.713 - - - - N-myristoyltransferase 1 [Source:MGI Symbol;Acc:MGI:102579]
88. Slc39a10 ENSMUSG00000025986 4445 0.713 0.713 - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:MGI Symbol;Acc:MGI:1914515]
89. Cwc15 ENSMUSG00000004096 5974 0.712 0.712 - - - - - CWC15 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1913320]
90. Mbnl1 ENSMUSG00000027763 1826 0.711 - - - - 0.711 - muscleblind like splicing factor 1 [Source:MGI Symbol;Acc:MGI:1928482]
91. Fam111a ENSMUSG00000024691 5090 0.711 - - - - 0.711 - family with sequence similarity 111, member A [Source:MGI Symbol;Acc:MGI:1915508]
92. Fancf ENSMUSG00000092118 616 0.711 - 0.711 - - - - Fanconi anemia, complementation group F [Source:MGI Symbol;Acc:MGI:3689889]
93. Rbms1 ENSMUSG00000026970 14428 0.711 0.711 - - - - - RNA binding motif, single stranded interacting protein 1 [Source:MGI Symbol;Acc:MGI:1861774]
94. Hoxc8 ENSMUSG00000001657 16443 0.711 - - - - 0.711 - homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
95. Rbx1 ENSMUSG00000022400 12346 0.71 - - - - 0.710 - ring-box 1 [Source:MGI Symbol;Acc:MGI:1891829]
96. Rab6a ENSMUSG00000030704 5634 0.71 - - 0.710 - - - RAB6A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:894313]
97. Snx5 ENSMUSG00000027423 3464 0.71 0.710 - - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
98. Prdm15 ENSMUSG00000014039 801 0.709 - 0.709 - - - - PR domain containing 15 [Source:MGI Symbol;Acc:MGI:1930121]
99. Ccng2 ENSMUSG00000029385 2518 0.708 - 0.708 - - - - cyclin G2 [Source:MGI Symbol;Acc:MGI:1095734]
100. Emc3 ENSMUSG00000030286 997 0.708 - 0.708 - - - - ER membrane protein complex subunit 3 [Source:MGI Symbol;Acc:MGI:1913337]

There are 27 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA