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Results for Smc1a

Gene Name Gene ID Reads Annotation
Smc1a ENSMUSG00000041133 6689 structural maintenance of chromosomes 1A [Source:MGI Symbol;Acc:MGI:1344345]







Genes with expression patterns similar to Smc1a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smc1a ENSMUSG00000041133 6689 6 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 1A [Source:MGI Symbol;Acc:MGI:1344345]
2. Pkp4 ENSMUSG00000026991 2294 1.645 0.872 0.773 - - - - plakophilin 4 [Source:MGI Symbol;Acc:MGI:109281]
3. Rars ENSMUSG00000018848 4531 0.932 - 0.932 - - - - arginyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1914297]
4. Birc5 ENSMUSG00000017716 6173 0.917 0.917 - - - - - baculoviral IAP repeat-containing 5 [Source:MGI Symbol;Acc:MGI:1203517]
5. Pik3ca ENSMUSG00000027665 4207 0.917 0.917 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha [Source:MGI Symbol;Acc:MGI:1206581]
6. Setd7 ENSMUSG00000037111 1899 0.914 0.914 - - - - - SET domain containing (lysine methyltransferase) 7 [Source:MGI Symbol;Acc:MGI:1920501]
7. Slc4a7 ENSMUSG00000021733 3154 0.913 0.913 - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:MGI Symbol;Acc:MGI:2443878]
8. Eri1 ENSMUSG00000031527 2839 0.906 - 0.906 - - - - exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:1914526]
9. Rab14 ENSMUSG00000026878 8334 0.904 0.904 - - - - - RAB14, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915615]
10. Rcn1 ENSMUSG00000005973 3094 0.903 0.903 - - - - - reticulocalbin 1 [Source:MGI Symbol;Acc:MGI:104559]
11. Cul5 ENSMUSG00000032030 1885 0.901 0.901 - - - - - cullin 5 [Source:MGI Symbol;Acc:MGI:1922967]
12. Gls ENSMUSG00000026103 2024 0.899 0.899 - - - - - glutaminase [Source:MGI Symbol;Acc:MGI:95752]
13. Glul ENSMUSG00000026473 4191 0.898 0.898 - - - - - glutamate-ammonia ligase (glutamine synthetase) [Source:MGI Symbol;Acc:MGI:95739]
14. Denr ENSMUSG00000023106 3840 0.898 0.898 - - - - - density-regulated protein [Source:MGI Symbol;Acc:MGI:1915434]
15. Dcaf15 ENSMUSG00000037103 2372 0.896 0.896 - - - - - DDB1 and CUL4 associated factor 15 [Source:MGI Symbol;Acc:MGI:2684420]
16. Epb4.1 Epb4.1 4344 0.893 0.893 - - - - -
17. Calm3 ENSMUSG00000019370 13096 0.893 0.893 - - - - - calmodulin 3 [Source:MGI Symbol;Acc:MGI:103249]
18. Psmc2 ENSMUSG00000028932 6789 0.893 0.893 - - - - - proteasome (prosome, macropain) 26S subunit, ATPase 2 [Source:MGI Symbol;Acc:MGI:109555]
19. Clasp2 ENSMUSG00000033392 1535 0.89 0.890 - - - - - CLIP associating protein 2 [Source:MGI Symbol;Acc:MGI:1923749]
20. Ptprs ENSMUSG00000013236 3894 0.89 0.890 - - - - - protein tyrosine phosphatase, receptor type, S [Source:MGI Symbol;Acc:MGI:97815]
21. Smu1 ENSMUSG00000028409 4193 0.89 0.890 - - - - - smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1915546]
22. Gm7110 Gm7110 2637 0.889 0.889 - - - - -
23. Nrf1 ENSMUSG00000058440 3663 0.889 0.889 - - - - - nuclear respiratory factor 1 [Source:MGI Symbol;Acc:MGI:1332235]
24. Glrx3 ENSMUSG00000031068 3221 0.887 0.887 - - - - - glutaredoxin 3 [Source:MGI Symbol;Acc:MGI:1353653]
25. Tacc1 ENSMUSG00000065954 1566 0.887 0.887 - - - - - transforming, acidic coiled-coil containing protein 1 [Source:MGI Symbol;Acc:MGI:2443510]
26. Atp5j ENSMUSG00000022890 11717 0.886 0.886 - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F [Source:MGI Symbol;Acc:MGI:107777]
27. Tnfaip8 ENSMUSG00000062210 2429 0.885 0.885 - - - - - tumor necrosis factor, alpha-induced protein 8 [Source:MGI Symbol;Acc:MGI:2147191]
28. Sugt1 ENSMUSG00000022024 5591 0.884 0.884 - - - - - SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915205]
29. Pafah1b1 ENSMUSG00000020745 6863 0.883 0.883 - - - - - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 [Source:MGI Symbol;Acc:MGI:109520]
30. Timm13 ENSMUSG00000020219 4527 0.883 0.883 - - - - - translocase of inner mitochondrial membrane 13 [Source:MGI Symbol;Acc:MGI:1353432]
31. Wwtr1 ENSMUSG00000027803 3120 0.883 0.883 - - - - - WW domain containing transcription regulator 1 [Source:MGI Symbol;Acc:MGI:1917649]
32. Ppig ENSMUSG00000042133 7420 0.882 0.882 - - - - - peptidyl-prolyl isomerase G (cyclophilin G) [Source:MGI Symbol;Acc:MGI:2445173]
33. Cetn2 ENSMUSG00000031347 1649 0.882 0.882 - - - - - centrin 2 [Source:MGI Symbol;Acc:MGI:1347085]
34. Sarnp ENSMUSG00000078427 4371 0.881 0.881 - - - - - SAP domain containing ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1913368]
35. Ube2r2 ENSMUSG00000036241 9669 0.881 0.881 - - - - - ubiquitin-conjugating enzyme E2R 2 [Source:MGI Symbol;Acc:MGI:1914865]
36. Mtmr6 ENSMUSG00000021987 2727 0.879 0.879 - - - - - myotubularin related protein 6 [Source:MGI Symbol;Acc:MGI:2145637]
37. Taldo1 ENSMUSG00000025503 9391 0.879 0.879 - - - - - transaldolase 1 [Source:MGI Symbol;Acc:MGI:1274789]
38. B4galt1 ENSMUSG00000028413 1806 0.879 0.879 - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:95705]
39. Purb ENSMUSG00000094483 10153 0.879 0.879 - - - - - purine rich element binding protein B [Source:MGI Symbol;Acc:MGI:1338779]
40. Etf1 ENSMUSG00000024360 5755 0.878 0.878 - - - - - eukaryotic translation termination factor 1 [Source:MGI Symbol;Acc:MGI:2385071]
41. Pias2 ENSMUSG00000025423 2581 0.877 0.877 - - - - - protein inhibitor of activated STAT 2 [Source:MGI Symbol;Acc:MGI:1096566]
42. M6pr ENSMUSG00000007458 2278 0.877 0.877 - - - - - mannose-6-phosphate receptor, cation dependent [Source:MGI Symbol;Acc:MGI:96904]
43. Cops8 ENSMUSG00000034432 3968 0.877 0.877 - - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
44. Lyrm5 571 0.876 0.876 - - - - - LYR motif containing 5, transcript variant X4
45. Thoc6 ENSMUSG00000041319 1276 0.875 0.875 - - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
46. Dmtf1 ENSMUSG00000042508 914 0.875 0.875 - - - - - cyclin D binding myb-like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344415]
47. Med30 ENSMUSG00000038622 2325 0.874 0.874 - - - - - mediator complex subunit 30 [Source:MGI Symbol;Acc:MGI:1917040]
48. Ttc3 ENSMUSG00000040785 15467 0.874 0.874 - - - - - tetratricopeptide repeat domain 3 [Source:MGI Symbol;Acc:MGI:1276539]
49. Guk1 ENSMUSG00000020444 1427 0.874 0.874 - - - - - guanylate kinase 1 [Source:MGI Symbol;Acc:MGI:95871]
50. Wbp11 ENSMUSG00000030216 4813 0.874 0.874 - - - - - WW domain binding protein 11 [Source:MGI Symbol;Acc:MGI:1891823]
51. Gng11 ENSMUSG00000032766 1581 0.872 0.872 - - - - - guanine nucleotide binding protein (G protein), gamma 11 [Source:MGI Symbol;Acc:MGI:1913316]
52. Ggnbp2 ENSMUSG00000020530 3732 0.872 0.872 - - - - - gametogenetin binding protein 2 [Source:MGI Symbol;Acc:MGI:2387356]
53. Trim71 ENSMUSG00000079259 1323 0.871 0.871 - - - - - tripartite motif-containing 71 [Source:MGI Symbol;Acc:MGI:2685973]
54. Fam220a ENSMUSG00000083012 1193 0.871 0.871 - - - - - family with sequence similarity 220, member A [Source:MGI Symbol;Acc:MGI:1914488]
55. Erp29 ENSMUSG00000029616 2933 0.871 0.871 - - - - - endoplasmic reticulum protein 29 [Source:MGI Symbol;Acc:MGI:1914647]
56. Nudcd1 ENSMUSG00000038736 2406 0.871 0.871 - - - - - NudC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914679]
57. Pkib ENSMUSG00000019876 677 0.871 0.871 - - - - - protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
58. Ppp2r3a ENSMUSG00000043154 1840 0.87 0.870 - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:MGI Symbol;Acc:MGI:2442104]
59. Prkdc ENSMUSG00000022672 742 0.87 0.870 - - - - - protein kinase, DNA activated, catalytic polypeptide [Source:MGI Symbol;Acc:MGI:104779]
60. Wdr75 ENSMUSG00000025995 1792 0.87 0.870 - - - - - WD repeat domain 75 [Source:MGI Symbol;Acc:MGI:1920924]
61. Erdr1 17201 0.869 0.869 - - - - - erythroid differentiation regulator 1, transcript variant 1, non-coding
62. Fam20b ENSMUSG00000033557 1380 0.869 0.869 - - - - - family with sequence similarity 20, member B [Source:MGI Symbol;Acc:MGI:2443990]
63. Ss18 ENSMUSG00000037013 2742 0.869 0.869 - - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
64. Fxr2 ENSMUSG00000018765 1650 0.869 0.869 - - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
65. Ndufaf2 ENSMUSG00000068184 1600 0.868 0.868 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:1922847]
66. Reep4 ENSMUSG00000033589 2187 0.868 0.868 - - - - - receptor accessory protein 4 [Source:MGI Symbol;Acc:MGI:1919799]
67. Polr3c ENSMUSG00000028099 1591 0.867 0.867 - - - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:1921664]
68. Oser1 ENSMUSG00000035399 1702 0.867 0.867 - - - - - oxidative stress responsive serine rich 1 [Source:MGI Symbol;Acc:MGI:1913930]
69. Ptcd2 ENSMUSG00000021650 1967 0.867 0.867 - - - - - pentatricopeptide repeat domain 2 [Source:MGI Symbol;Acc:MGI:1916177]
70. Heatr3 ENSMUSG00000031657 1306 0.866 0.866 - - - - - HEAT repeat containing 3 [Source:MGI Symbol;Acc:MGI:2444491]
71. Atf6 ENSMUSG00000026663 934 0.866 0.866 - - - - - activating transcription factor 6 [Source:MGI Symbol;Acc:MGI:1926157]
72. Ptplad1 Ptplad1 3671 0.866 0.866 - - - - -
73. Mastl ENSMUSG00000026779 843 0.866 0.866 - - - - - microtubule associated serine/threonine kinase-like [Source:MGI Symbol;Acc:MGI:1914371]
74. Shisa5 ENSMUSG00000025647 1562 0.866 0.866 - - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
75. Clasrp ENSMUSG00000061028 843 0.865 0.865 - - - - - CLK4-associating serine/arginine rich protein [Source:MGI Symbol;Acc:MGI:1855695]
76. Nt5c3 ENSMUSG00000029780 2379 0.865 0.865 - - - - - 5'-nucleotidase, cytosolic III [Source:MGI Symbol;Acc:MGI:1927186]
77. Grm4 ENSMUSG00000063239 430 0.865 0.865 - - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
78. 2610021A01Rik ENSMUSG00000091474 463 0.865 0.865 - - - - - RIKEN cDNA 2610021A01 gene [Source:MGI Symbol;Acc:MGI:1922662]
79. Cul4b ENSMUSG00000031095 1334 0.865 0.865 - - - - - cullin 4B [Source:MGI Symbol;Acc:MGI:1919834]
80. Golph3 ENSMUSG00000022200 1780 0.865 0.865 - - - - - golgi phosphoprotein 3 [Source:MGI Symbol;Acc:MGI:1913879]
81. Tbx2 ENSMUSG00000000093 1403 0.865 0.865 - - - - - T-box 2 [Source:MGI Symbol;Acc:MGI:98494]
82. Slc38a1 ENSMUSG00000023169 5594 0.865 0.865 - - - - - solute carrier family 38, member 1 [Source:MGI Symbol;Acc:MGI:2145895]
83. Arrb1 ENSMUSG00000018909 902 0.865 0.865 - - - - - arrestin, beta 1 [Source:MGI Symbol;Acc:MGI:99473]
84. Zfp334 ENSMUSG00000017667 3163 0.864 0.864 - - - - - zinc finger protein 334 [Source:MGI Symbol;Acc:MGI:2388656]
85. Dnajc9 ENSMUSG00000021811 4893 0.864 0.864 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:MGI Symbol;Acc:MGI:1915326]
86. Zfp820 ENSMUSG00000069743 854 0.864 0.864 - - - - - zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
87. Cyc1 ENSMUSG00000022551 4794 0.864 0.864 - - - - - cytochrome c-1 [Source:MGI Symbol;Acc:MGI:1913695]
88. Gpcpd1 ENSMUSG00000027346 1151 0.863 0.863 - - - - - glycerophosphocholine phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:104898]
89. Jakmip2 ENSMUSG00000024502 742 0.863 0.863 - - - - - janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
90. Ap2s1 ENSMUSG00000008036 3268 0.863 0.863 - - - - - adaptor-related protein complex 2, sigma 1 subunit [Source:MGI Symbol;Acc:MGI:2141861]
91. Kif3a ENSMUSG00000018395 1688 0.863 0.863 - - - - - kinesin family member 3A [Source:MGI Symbol;Acc:MGI:107689]
92. Map4k1 ENSMUSG00000037337 434 0.863 0.863 - - - - - mitogen-activated protein kinase kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346882]
93. Trim62 ENSMUSG00000041000 867 0.862 0.862 - - - - - tripartite motif-containing 62 [Source:MGI Symbol;Acc:MGI:1914775]
94. Rsbn1 ENSMUSG00000044098 1083 0.862 0.862 - - - - - rosbin, round spermatid basic protein 1 [Source:MGI Symbol;Acc:MGI:2444993]
95. Med11 ENSMUSG00000018923 1869 0.862 0.862 - - - - - mediator complex subunit 11 [Source:MGI Symbol;Acc:MGI:1913422]
96. Plxna1 ENSMUSG00000030084 4895 0.862 0.862 - - - - - plexin A1 [Source:MGI Symbol;Acc:MGI:107685]
97. Slc7a5 ENSMUSG00000040010 313 0.862 0.862 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 [Source:MGI Symbol;Acc:MGI:1298205]
98. Kcnmb4 ENSMUSG00000054934 1522 0.862 0.862 - - - - - potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:MGI Symbol;Acc:MGI:1913272]
99. Sssca1 ENSMUSG00000079478 1411 0.861 0.861 - - - - - Sjogren syndrome/scleroderma autoantigen 1 [Source:MGI Symbol;Acc:MGI:1913482]
100. Zc3h8 ENSMUSG00000027387 363 0.861 0.861 - - - - - zinc finger CCCH type containing 8 [Source:MGI Symbol;Acc:MGI:1930128]

There are 131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA