Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Smarcd2

Gene Name Gene ID Reads Annotation
Smarcd2 ENSMUSG00000078619 1081 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:MGI Symbol;Acc:MGI:1933621]







Genes with expression patterns similar to Smarcd2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smarcd2 ENSMUSG00000078619 1081 6 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:MGI Symbol;Acc:MGI:1933621]
2. Fam162a ENSMUSG00000003955 5354 1.478 0.719 - - - - 0.759 family with sequence similarity 162, member A [Source:MGI Symbol;Acc:MGI:1917436]
3. Cnn1 ENSMUSG00000001349 296 0.91 0.910 - - - - - calponin 1 [Source:MGI Symbol;Acc:MGI:104979]
4. Raph1 ENSMUSG00000026014 401 0.909 0.909 - - - - - Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:MGI Symbol;Acc:MGI:1924550]
5. Ctnnbip1 ENSMUSG00000028988 3409 0.905 0.905 - - - - - catenin beta interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915756]
6. Phyh ENSMUSG00000026664 659 0.904 0.904 - - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
7. Armc8 ENSMUSG00000032468 1199 0.903 0.903 - - - - - armadillo repeat containing 8 [Source:MGI Symbol;Acc:MGI:1921375]
8. Tm7sf3 ENSMUSG00000040234 858 0.901 0.901 - - - - - transmembrane 7 superfamily member 3 [Source:MGI Symbol;Acc:MGI:1914873]
9. Ccdc120 ENSMUSG00000031150 486 0.901 0.901 - - - - - coiled-coil domain containing 120 [Source:MGI Symbol;Acc:MGI:1859619]
10. Timp1 ENSMUSG00000001131 780 0.899 0.899 - - - - - tissue inhibitor of metalloproteinase 1 [Source:MGI Symbol;Acc:MGI:98752]
11. Meaf6 ENSMUSG00000028863 3587 0.899 0.899 - - - - - MYST/Esa1-associated factor 6 [Source:MGI Symbol;Acc:MGI:1917338]
12. 4930513N10Rik ENSMUSG00000074136 212 0.895 0.895 - - - - - RIKEN cDNA 4930513N10 gene [Source:MGI Symbol;Acc:MGI:2443064]
13. Marveld1 ENSMUSG00000044345 836 0.894 0.894 - - - - - MARVEL (membrane-associating) domain containing 1 [Source:MGI Symbol;Acc:MGI:2147570]
14. Dnm3os ENSMUSG00000078190 846 0.894 0.894 - - - - - dynamin 3, opposite strand [Source:MGI Symbol;Acc:MGI:3052332]
15. Fam63a 1080 0.893 0.893 - - - - - family with sequence similarity 63, member A, transcript variant X2
16. Rchy1 ENSMUSG00000029397 1938 0.893 0.893 - - - - - ring finger and CHY zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1915348]
17. Bloc1s2 ENSMUSG00000057506 840 0.892 0.892 - - - - - biogenesis of lysosomal organelles complex-1, subunit 2 [Source:MGI Symbol;Acc:MGI:1920939]
18. Utp20 ENSMUSG00000004356 1170 0.891 0.891 - - - - - UTP20 small subunit processome component [Source:MGI Symbol;Acc:MGI:1917933]
19. Pggt1b ENSMUSG00000024477 511 0.891 0.891 - - - - - protein geranylgeranyltransferase type I, beta subunit [Source:MGI Symbol;Acc:MGI:1917514]
20. Bop1 ENSMUSG00000022557 5004 0.89 0.890 - - - - - block of proliferation 1 [Source:MGI Symbol;Acc:MGI:1334460]
21. Stam ENSMUSG00000026718 2341 0.89 0.890 - - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:MGI Symbol;Acc:MGI:1329014]
22. Slc25a28 ENSMUSG00000040414 720 0.889 0.889 - - - - - solute carrier family 25, member 28 [Source:MGI Symbol;Acc:MGI:2180509]
23. 9330159M07Rik ENSMUSG00000097177 192 0.889 0.889 - - - - - RIKEN cDNA 9330159M07 gene [Source:MGI Symbol;Acc:MGI:2442519]
24. Fhl3 ENSMUSG00000032643 178 0.889 0.889 - - - - - four and a half LIM domains 3 [Source:MGI Symbol;Acc:MGI:1341092]
25. Eps8l2 ENSMUSG00000025504 185 0.889 0.889 - - - - - EPS8-like 2 [Source:MGI Symbol;Acc:MGI:2138828]
26. Dgat2 ENSMUSG00000030747 207 0.889 0.889 - - - - - diacylglycerol O-acyltransferase 2 [Source:MGI Symbol;Acc:MGI:1915050]
27. Chid1 ENSMUSG00000025512 572 0.889 0.889 - - - - - chitinase domain containing 1 [Source:MGI Symbol;Acc:MGI:1915288]
28. Inpp1 ENSMUSG00000026102 176 0.889 0.889 - - - - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
29. Fbxl22 ENSMUSG00000050503 191 0.889 0.889 - - - - - F-box and leucine-rich repeat protein 22 [Source:MGI Symbol;Acc:MGI:1921415]
30. Vstm4 ENSMUSG00000050666 343 0.889 0.889 - - - - - V-set and transmembrane domain containing 4 [Source:MGI Symbol;Acc:MGI:2444633]
31. Azin1 ENSMUSG00000037458 2371 0.889 0.889 - - - - - antizyme inhibitor 1 [Source:MGI Symbol;Acc:MGI:1859169]
32. Mybl2 ENSMUSG00000017861 1195 0.888 0.888 - - - - - myeloblastosis oncogene-like 2 [Source:MGI Symbol;Acc:MGI:101785]
33. Shroom2 ENSMUSG00000045180 1182 0.888 0.888 - - - - - shroom family member 2 [Source:MGI Symbol;Acc:MGI:107194]
34. Gm15823 ENSMUSG00000081143 242 0.888 0.888 - - - - - predicted gene 15823 [Source:MGI Symbol;Acc:MGI:3801858]
35. 5430435G22Rik 5430435G22Rik 68 0.888 0.888 - - - - -
36. Wdr73 ENSMUSG00000025722 956 0.887 0.887 - - - - - WD repeat domain 73 [Source:MGI Symbol;Acc:MGI:1919218]
37. Ccbe1 ENSMUSG00000046318 722 0.885 0.885 - - - - - collagen and calcium binding EGF domains 1 [Source:MGI Symbol;Acc:MGI:2445053]
38. Dhcr24 ENSMUSG00000034926 552 0.885 0.885 - - - - - 24-dehydrocholesterol reductase [Source:MGI Symbol;Acc:MGI:1922004]
39. Slc39a11 ENSMUSG00000041654 939 0.885 0.885 - - - - - solute carrier family 39 (metal ion transporter), member 11 [Source:MGI Symbol;Acc:MGI:1917056]
40. Rab36 ENSMUSG00000020175 400 0.885 0.885 - - - - - RAB36, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1924127]
41. Ero1lb ENSMUSG00000057069 171 0.885 0.885 - - - - - ERO1-like beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914725]
42. Vmn2r55 ENSMUSG00000091045 88 0.885 0.885 - - - - - vomeronasal 2, receptor 55 [Source:MGI Symbol;Acc:MGI:3757950]
43. Nol10 ENSMUSG00000061458 1510 0.885 0.885 - - - - - nucleolar protein 10 [Source:MGI Symbol;Acc:MGI:2684913]
44. Zfp799 ENSMUSG00000095253 1352 0.884 0.884 - - - - - zinc finger protein 799 [Source:MGI Symbol;Acc:MGI:2443934]
45. Mlx ENSMUSG00000017801 376 0.884 0.884 - - - - - MAX-like protein X [Source:MGI Symbol;Acc:MGI:108398]
46. Sh2b2 ENSMUSG00000005057 875 0.883 0.883 - - - - - SH2B adaptor protein 2 [Source:MGI Symbol;Acc:MGI:1345171]
47. 1500011B03Rik ENSMUSG00000072694 1128 0.883 0.883 - - - - - RIKEN cDNA 1500011B03 gene [Source:MGI Symbol;Acc:MGI:1913486]
48. Dkk3 ENSMUSG00000030772 426 0.882 0.882 - - - - - dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
49. Ptx3 ENSMUSG00000027832 735 0.881 0.881 - - - - - pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
50. Coq3 ENSMUSG00000028247 463 0.881 0.881 - - - - - coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
51. Gm14849 ENSMUSG00000081807 337 0.88 0.880 - - - - - predicted gene 14849 [Source:MGI Symbol;Acc:MGI:3802125]
52. St3gal2 ENSMUSG00000031749 2401 0.88 0.880 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:99427]
53. Plac1 ENSMUSG00000061082 138 0.88 0.880 - - - - - placental specific protein 1 [Source:MGI Symbol;Acc:MGI:1926287]
54. 4932438A13Rik ENSMUSG00000037270 1496 0.879 0.879 - - - - - RIKEN cDNA 4932438A13 gene [Source:MGI Symbol;Acc:MGI:2444631]
55. Kctd6 ENSMUSG00000021752 327 0.879 0.879 - - - - - potassium channel tetramerisation domain containing 6 [Source:MGI Symbol;Acc:MGI:1918643]
56. Ctsc ENSMUSG00000030560 650 0.879 0.879 - - - - - cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
57. Mrps6 ENSMUSG00000039680 1637 0.879 0.879 - - - - - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
58. Zfp324 ENSMUSG00000004500 367 0.878 0.878 - - - - - zinc finger protein 324 [Source:MGI Symbol;Acc:MGI:2444641]
59. Arfgap3 ENSMUSG00000054277 1293 0.878 0.878 - - - - - ADP-ribosylation factor GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:1913501]
60. Lrrc61 ENSMUSG00000073096 1054 0.878 0.878 - - - - - leucine rich repeat containing 61 [Source:MGI Symbol;Acc:MGI:2652848]
61. Pwp1 ENSMUSG00000001785 2614 0.878 0.878 - - - - - PWP1 homolog, endonuclein [Source:MGI Symbol;Acc:MGI:1914735]
62. BC002163 ENSMUSG00000081824 561 0.877 0.877 - - - - - cDNA sequence BC002163 [Source:MGI Symbol;Acc:MGI:3612445]
63. Ccdc12 ENSMUSG00000019659 1494 0.877 0.877 - - - - - coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
64. Xkr5 ENSMUSG00000039814 339 0.876 0.876 - - - - - X-linked Kx blood group related 5 [Source:MGI Symbol;Acc:MGI:2442327]
65. Nrros ENSMUSG00000052384 234 0.875 0.875 - - - - - negative regulator of reactive oxygen species [Source:MGI Symbol;Acc:MGI:2445095]
66. Shank3 ENSMUSG00000022623 139 0.875 0.875 - - - - - SH3 and multiple ankyrin repeat domains 3 [Source:MGI Symbol;Acc:MGI:1930016]
67. Mtmr9 ENSMUSG00000035078 434 0.875 0.875 - - - - - myotubularin related protein 9 [Source:MGI Symbol;Acc:MGI:2442842]
68. Ddx28 ENSMUSG00000045538 608 0.874 0.874 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:MGI Symbol;Acc:MGI:1919236]
69. Gm2a ENSMUSG00000000594 385 0.873 0.873 - - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
70. Dnm2 ENSMUSG00000033335 1247 0.872 0.872 - - - - - dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
71. Cdc23 ENSMUSG00000024370 369 0.872 0.872 - - - - - CDC23 cell division cycle 23 [Source:MGI Symbol;Acc:MGI:1098815]
72. Raver1 ENSMUSG00000010205 347 0.871 0.871 - - - - - ribonucleoprotein, PTB-binding 1 [Source:MGI Symbol;Acc:MGI:1919016]
73. Ccne2 ENSMUSG00000028212 419 0.871 0.871 - - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
74. Zfp760 ENSMUSG00000067928 1275 0.871 0.871 - - - - - zinc finger protein 760 [Source:MGI Symbol;Acc:MGI:2679257]
75. Ankrd37 ENSMUSG00000050914 254 0.87 0.870 - - - - - ankyrin repeat domain 37 [Source:MGI Symbol;Acc:MGI:3603344]
76. Zfp654 ENSMUSG00000047141 509 0.87 0.870 - - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
77. Csrnp1 ENSMUSG00000032515 372 0.869 0.869 - - - - - cysteine-serine-rich nuclear protein 1 [Source:MGI Symbol;Acc:MGI:2387989]
78. Akr1b10 ENSMUSG00000061758 586 0.868 0.868 - - - - - aldo-keto reductase family 1, member B10 (aldose reductase) [Source:MGI Symbol;Acc:MGI:1915111]
79. Caprin2 ENSMUSG00000030309 884 0.867 0.867 - - - - - caprin family member 2 [Source:MGI Symbol;Acc:MGI:2448541]
80. Dhx16 ENSMUSG00000024422 828 0.867 0.867 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:MGI Symbol;Acc:MGI:1916442]
81. Dynlt1c ENSMUSG00000000579 571 0.867 0.867 - - - - - dynein light chain Tctex-type 1C [Source:MGI Symbol;Acc:MGI:3807476]
82. Trappc2l ENSMUSG00000015013 1398 0.866 0.866 - - - - - trafficking protein particle complex 2-like [Source:MGI Symbol;Acc:MGI:1916295]
83. Herpud1 ENSMUSG00000031770 842 0.866 0.866 - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:MGI Symbol;Acc:MGI:1927406]
84. RP23-103I12.13 RP23-103I12.13 1512 0.865 0.865 - - - - -
85. Mtmr12 ENSMUSG00000039458 952 0.865 0.865 - - - - - myotubularin related protein 12 [Source:MGI Symbol;Acc:MGI:2443034]
86. Ppp2r2a ENSMUSG00000022052 5227 0.865 0.865 - - - - - protein phosphatase 2, regulatory subunit B, alpha [Source:MGI Symbol;Acc:MGI:1919228]
87. Dcaf13 ENSMUSG00000022300, ENSMUSG00000106903 2594 0.865 0.865 - - - - - DDB1 and CUL4 associated factor 13 [Source:MGI Symbol;Acc:MGI:2684929]
88. Ercc8 ENSMUSG00000021694 1159 0.865 0.865 - - - - - excision repaiross-complementing rodent repair deficiency, complementation group 8 [Source:MGI Symbol;Acc:MGI:1919241]
89. Zfyve1 ENSMUSG00000042628 143 0.863 0.863 - - - - - zinc finger, FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:3026685]
90. Rin2 ENSMUSG00000001768 996 0.862 0.862 - - - - - Ras and Rab interactor 2 [Source:MGI Symbol;Acc:MGI:1921280]
91. Dcaf11 ENSMUSG00000022214 663 0.862 0.862 - - - - - DDB1 and CUL4 associated factor 11 [Source:MGI Symbol;Acc:MGI:90168]
92. Zfp623 ENSMUSG00000050846 1215 0.861 0.861 - - - - - zinc finger protein 623 [Source:MGI Symbol;Acc:MGI:1926084]
93. Zbtb8os ENSMUSG00000057572 1389 0.861 0.861 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:MGI Symbol;Acc:MGI:1914356]
94. Spsb1 ENSMUSG00000039911 1526 0.861 0.861 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:MGI Symbol;Acc:MGI:1921896]
95. Zfp114 ENSMUSG00000068962 1595 0.86 0.860 - - - - - zinc finger protein 114 [Source:MGI Symbol;Acc:MGI:3037815]
96. Gpd1l ENSMUSG00000050627 467 0.86 0.860 - - - - - glycerol-3-phosphate dehydrogenase 1-like [Source:MGI Symbol;Acc:MGI:1289257]
97. Prkaa1 ENSMUSG00000050697 591 0.858 0.858 - - - - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
98. Aven ENSMUSG00000003604 1055 0.858 0.858 - - - - - apoptosis, caspase activation inhibitor [Source:MGI Symbol;Acc:MGI:1921518]
99. Msh3 ENSMUSG00000014850 886 0.858 0.858 - - - - - mutS homolog 3 [Source:MGI Symbol;Acc:MGI:109519]
100. Ppp1r12b ENSMUSG00000073557 766 0.858 0.858 - - - - - protein phosphatase 1, regulatory subunit 12B [Source:MGI Symbol;Acc:MGI:1916417]

There are 168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA