Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smarcb1

Gene Name Gene ID Reads Annotation
Smarcb1 ENSMUSG00000000902 4174 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:1328366]







Genes with expression patterns similar to Smarcb1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smarcb1 ENSMUSG00000000902 4174 6 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:1328366]
2. 2310061I04Rik ENSMUSG00000050705 1463 0.838 - 0.838 - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
3. Mex3b ENSMUSG00000057706 3344 0.82 - 0.820 - - - - mex3 RNA binding family member B [Source:MGI Symbol;Acc:MGI:1918252]
4. Copb2 ENSMUSG00000032458 4148 0.818 - 0.818 - - - - coatomer protein complex, subunit beta 2 (beta prime) [Source:MGI Symbol;Acc:MGI:1354962]
5. Plscr3 ENSMUSG00000019461 2783 0.813 - 0.813 - - - - phospholipid scramblase 3 [Source:MGI Symbol;Acc:MGI:1917560]
6. Nfyb ENSMUSG00000020248 4562 0.806 - 0.806 - - - - nuclear transcription factor-Y beta [Source:MGI Symbol;Acc:MGI:97317]
7. Gcc2 ENSMUSG00000038039, ENSMUSG00000107275 3051 0.8 - 0.800 - - - - GRIP and coiled-coil domain containing 2 [Source:MGI Symbol;Acc:MGI:1917547]
8. Syce2 ENSMUSG00000003824 1083 0.794 - 0.794 - - - - synaptonemal complex central element protein 2 [Source:MGI Symbol;Acc:MGI:1919096]
9. Nacc1 ENSMUSG00000001910 3615 0.789 - 0.789 - - - - nucleus accumbens associated 1, BEN and BTB (POZ) domain containing [Source:MGI Symbol;Acc:MGI:1914080]
10. Ndufs7 ENSMUSG00000020153 1141 0.788 - 0.788 - - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:MGI Symbol;Acc:MGI:1922656]
11. Arhgef1 ENSMUSG00000040940 1610 0.787 - 0.787 - - - - Rho guanine nucleotide exchange factor (GEF) 1 [Source:MGI Symbol;Acc:MGI:1353510]
12. Tug1 ENSMUSG00000056579 3640 0.781 0.781 - - - - - taurine upregulated gene 1 [Source:MGI Symbol;Acc:MGI:2144114]
13. Tfam ENSMUSG00000003923 5233 0.78 - 0.780 - - - - transcription factor A, mitochondrial [Source:MGI Symbol;Acc:MGI:107810]
14. H13 ENSMUSG00000019188 2517 0.779 - 0.779 - - - - histocompatibility 13 [Source:MGI Symbol;Acc:MGI:95886]
15. Gm12355 ENSMUSG00000078134 4798 0.779 - 0.779 - - - - predicted gene 12355 [Source:MGI Symbol;Acc:MGI:3649769]
16. Steap2 ENSMUSG00000015653 632 0.777 - 0.777 - - - - six transmembrane epithelial antigen of prostate 2 [Source:MGI Symbol;Acc:MGI:1921301]
17. Impa1 ENSMUSG00000027531 2027 0.772 - 0.772 - - - - inositol (myo)-1(or 4)-monophosphatase 1 [Source:MGI Symbol;Acc:MGI:1933158]
18. Phf20l1 ENSMUSG00000072501 1844 0.77 - 0.770 - - - - PHD finger protein 20-like 1 [Source:MGI Symbol;Acc:MGI:2444412]
19. Nsmce4a ENSMUSG00000040331 3290 0.769 - 0.769 - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:MGI Symbol;Acc:MGI:1915122]
20. Asxl1 ENSMUSG00000042548 4358 0.768 - 0.768 - - - - additional sex combs like 1 [Source:MGI Symbol;Acc:MGI:2684063]
21. Tcp11l1 ENSMUSG00000027175 1931 0.767 - 0.767 - - - - t-complex 11 like 1 [Source:MGI Symbol;Acc:MGI:2444263]
22. 2810001G20Rik ENSMUSG00000087497 460 0.765 - 0.765 - - - - RIKEN cDNA 2810001G20 gene [Source:MGI Symbol;Acc:MGI:1913706]
23. Utp14a ENSMUSG00000063785 2135 0.765 - 0.765 - - - - UTP14A small subunit processome component [Source:MGI Symbol;Acc:MGI:1919804]
24. Rpl9 ENSMUSG00000047215 1086 0.765 - 0.765 - - - - ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
25. Ncaph2 ENSMUSG00000008690 2289 0.763 - 0.763 - - - - non-SMC condensin II complex, subunit H2 [Source:MGI Symbol;Acc:MGI:1289164]
26. Arhgdia ENSMUSG00000025132 6935 0.759 - - 0.759 - - - Rho GDP dissociation inhibitor (GDI) alpha [Source:MGI Symbol;Acc:MGI:2178103]
27. Appl2 ENSMUSG00000020263 993 0.759 - 0.759 - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 [Source:MGI Symbol;Acc:MGI:2384914]
28. Six4 ENSMUSG00000034460 841 0.757 - 0.757 - - - - sine oculis-related homeobox 4 [Source:MGI Symbol;Acc:MGI:106034]
29. Camsap2 ENSMUSG00000041570 2915 0.754 - 0.754 - - - - calmodulin regulated spectrin-associated protein family, member 2 [Source:MGI Symbol;Acc:MGI:1922434]
30. Trim28 ENSMUSG00000005566 48788 0.75 - - 0.750 - - - tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
31. Ctcf ENSMUSG00000005698 3929 0.749 - 0.749 - - - - CCCTC-binding factor [Source:MGI Symbol;Acc:MGI:109447]
32. Snf8 ENSMUSG00000006058 973 0.748 - 0.748 - - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1343161]
33. Rps6kb2 ENSMUSG00000024830, ENSMUSG00000097721 1169 0.747 - - - - 0.747 - ribosomal protein S6 kinase, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1927343]
34. Polr3b ENSMUSG00000034453 2141 0.743 - 0.743 - - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:MGI Symbol;Acc:MGI:1917678]
35. 1110037F02Rik 2263 0.734 - 0.734 - - - - RIKEN cDNA 1110037F02 gene, transcript variant X1
36. Ulk1 ENSMUSG00000029512 2592 0.734 0.734 - - - - - unc-51 like kinase 1 [Source:MGI Symbol;Acc:MGI:1270126]
37. Smyd2 ENSMUSG00000026603 2210 0.728 - 0.728 - - - - SET and MYND domain containing 2 [Source:MGI Symbol;Acc:MGI:1915889]
38. Cdc25a ENSMUSG00000032477 3539 0.727 - 0.727 - - - - cell division cycle 25A [Source:MGI Symbol;Acc:MGI:103198]
39. Nfkbia ENSMUSG00000021025 1709 0.725 - 0.725 - - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha [Source:MGI Symbol;Acc:MGI:104741]
40. Prkar1a ENSMUSG00000020612 20773 0.722 0.722 - - - - - protein kinase, cAMP dependent regulatory, type I, alpha [Source:MGI Symbol;Acc:MGI:104878]
41. Tulp4 ENSMUSG00000034377 4705 0.72 - 0.720 - - - - tubby like protein 4 [Source:MGI Symbol;Acc:MGI:1916092]
42. Plekhg2 ENSMUSG00000037552 2138 0.719 - 0.719 - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 2 [Source:MGI Symbol;Acc:MGI:2141874]
43. Rad21 ENSMUSG00000022314 17280 0.719 - 0.719 - - - - RAD21 cohesin complex component [Source:MGI Symbol;Acc:MGI:108016]
44. Ddx17 ENSMUSG00000055065 14699 0.718 0.718 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]
45. 1700037C18Rik ENSMUSG00000005983 1365 0.715 - 0.715 - - - - RIKEN cDNA 1700037C18 gene [Source:MGI Symbol;Acc:MGI:1920511]
46. Nfyc ENSMUSG00000032897 6731 0.712 - 0.712 - - - - nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]
47. Ralbp1 ENSMUSG00000024096 4172 0.71 - 0.710 - - - - ralA binding protein 1 [Source:MGI Symbol;Acc:MGI:108466]
48. Rala ENSMUSG00000008859 4154 0.709 - 0.709 - - - - v-ral simian leukemia viral oncogene A (ras related) [Source:MGI Symbol;Acc:MGI:1927243]
49. Tab2 ENSMUSG00000015755 5707 0.706 0.706 - - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 2 [Source:MGI Symbol;Acc:MGI:1915902]
50. Acot13 ENSMUSG00000006717 1751 0.705 0.705 - - - - - acyl-CoA thioesterase 13 [Source:MGI Symbol;Acc:MGI:1914084]
51. Cnot1 ENSMUSG00000036550 7074 0.705 - 0.705 - - - - CCR4-NOT transcription complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2442402]
52. Plvap ENSMUSG00000034845 2825 0.7 - 0.700 - - - - plasmalemma vesicle associated protein [Source:MGI Symbol;Acc:MGI:1890497]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA