Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Smarca5-ps

Gene Name Gene ID Reads Annotation
Smarca5-ps ENSMUSG00000052912 83 SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene [Source:MGI Symbol;Acc:MGI:2443330]







Genes with expression patterns similar to Smarca5-ps

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smarca5-ps ENSMUSG00000052912 83 6 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene [Source:MGI Symbol;Acc:MGI:2443330]
2. Rasef ENSMUSG00000043003 55 1.829 - - 0.908 - - 0.921 RAS and EF hand domain containing [Source:MGI Symbol;Acc:MGI:2448565]
3. Prdm9 ENSMUSG00000051977 134 1.734 - - 0.801 - - 0.933 PR domain containing 9 [Source:MGI Symbol;Acc:MGI:2384854]
4. Btbd9 ENSMUSG00000062202 1289 1.731 - - 0.820 - - 0.911 BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
5. Gemin6 ENSMUSG00000055760 841 1.71 - - 0.761 - - 0.949 gem nuclear organelle associated protein 6 [Source:MGI Symbol;Acc:MGI:1914492]
6. Wars2 ENSMUSG00000004233 436 1.57 - - 0.810 - - 0.760 tryptophanyl tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1917810]
7. Gm11975 ENSMUSG00000084231 70 0.998 - - - - - 0.998 predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
8. 6530403H02Rik ENSMUSG00000098097 13 0.998 - - - - - 0.998 RIKEN cDNA 6530403H02 gene [Source:MGI Symbol;Acc:MGI:2444638]
9. Gm15688 ENSMUSG00000089737 18 0.995 - - - - - 0.995 predicted gene 15688 [Source:MGI Symbol;Acc:MGI:3647549]
10. Gm13815 ENSMUSG00000080860 47 0.993 - - - - - 0.993 predicted gene 13815 [Source:MGI Symbol;Acc:MGI:3649318]
11. Gm26205 ENSMUSG00000064841 78 0.992 - - - - - 0.992 predicted gene, 26205 [Source:MGI Symbol;Acc:MGI:5455982]
12. Gm13423 ENSMUSG00000081648 80 0.992 - - - - - 0.992 predicted gene 13423 [Source:MGI Symbol;Acc:MGI:3650165]
13. Gm12577 ENSMUSG00000083834 78 0.989 - - - - - 0.989 predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
14. AU023871 AU023871 49 0.989 - - - - - 0.989
15. Ptgir ENSMUSG00000043017 22 0.989 - - - - - 0.989 prostaglandin I receptor (IP) [Source:MGI Symbol;Acc:MGI:99535]
16. Kcnc2 ENSMUSG00000035681 30 0.989 - - - - - 0.989 potassium voltage gated channel, Shaw-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:96668]
17. Ptpro ENSMUSG00000030223 65 0.985 - - - - - 0.985 protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]
18. Gm5258 ENSMUSG00000091806 123 0.984 - - - - - 0.984 predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
19. Siglec1 ENSMUSG00000027322 95 0.981 - - - - - 0.981 sialic acid binding Ig-like lectin 1, sialoadhesin [Source:MGI Symbol;Acc:MGI:99668]
20. Mamld1 ENSMUSG00000059401 44 0.981 - - - - - 0.981 mastermind-like domain containing 1 [Source:MGI Symbol;Acc:MGI:3045303]
21. C730034F03Rik ENSMUSG00000079242 111 0.979 - - - - - 0.979 RIKEN cDNA C730034F03 gene [Source:MGI Symbol;Acc:MGI:2441921]
22. Gm11739 ENSMUSG00000086826 102 0.978 - - - - - 0.978 predicted gene 11739 [Source:MGI Symbol;Acc:MGI:3650571]
23. Gm16195 ENSMUSG00000087308 86 0.976 - - - - - 0.976 predicted gene 16195 [Source:MGI Symbol;Acc:MGI:3801774]
24. Rhno1 ENSMUSG00000048668 97 0.975 - - - - - 0.975 RAD9-HUS1-RAD1 interacting nuclear orphan 1 [Source:MGI Symbol;Acc:MGI:1915315]
25. Tsen54 ENSMUSG00000020781 106 0.974 - - - - - 0.974 tRNA splicing endonuclease subunit 54 [Source:MGI Symbol;Acc:MGI:1923515]
26. Ubxn2a ENSMUSG00000020634 544 0.971 - - - - - 0.971 UBX domain protein 2A [Source:MGI Symbol;Acc:MGI:2442310]
27. Gfra4 ENSMUSG00000027316 419 0.968 - - - - - 0.968 glial cell line derived neurotrophic factor family receptor alpha 4 [Source:MGI Symbol;Acc:MGI:1341873]
28. Fbxo27 ENSMUSG00000037463 111 0.968 - - - - - 0.968 F-box protein 27 [Source:MGI Symbol;Acc:MGI:2685007]
29. Ptprm ENSMUSG00000033278 279 0.968 - - - - - 0.968 protein tyrosine phosphatase, receptor type, M [Source:MGI Symbol;Acc:MGI:102694]
30. Slc35d3 ENSMUSG00000050473 84 0.966 - - - - - 0.966 solute carrier family 35, member D3 [Source:MGI Symbol;Acc:MGI:1923407]
31. Nat14 ENSMUSG00000035285 53 0.964 - - - - - 0.964 N-acetyltransferase 14 [Source:MGI Symbol;Acc:MGI:3039561]
32. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.962 - - - - - 0.962 predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
33. Dnase2a ENSMUSG00000003812 117 0.961 - - - - - 0.961 deoxyribonuclease II alpha [Source:MGI Symbol;Acc:MGI:1329019]
34. Cyyr1 ENSMUSG00000041134 278 0.958 - - - - - 0.958 cysteine and tyrosine-rich protein 1 [Source:MGI Symbol;Acc:MGI:2152187]
35. Ggct ENSMUSG00000002797 199 0.958 - - - - - 0.958 gamma-glutamyl cyclotransferase [Source:MGI Symbol;Acc:MGI:95700]
36. Gm11033 ENSMUSG00000079011 144 0.957 - - - - - 0.957 predicted gene 11033 [Source:MGI Symbol;Acc:MGI:3779256]
37. Frrs1l ENSMUSG00000045589 140 0.954 - - - - - 0.954 ferric-chelate reductase 1 like [Source:MGI Symbol;Acc:MGI:2442704]
38. Gm13186 ENSMUSG00000081278 857 0.951 - - - - - 0.951 predicted gene 13186 [Source:MGI Symbol;Acc:MGI:3649441]
39. Pm20d1 ENSMUSG00000042251 59 0.948 - - - - - 0.948 peptidase M20 domain containing 1 [Source:MGI Symbol;Acc:MGI:2442939]
40. Fam46c 227 0.946 - - - - - 0.946 family with sequence similarity 46, member C, transcript variant X1
41. Tenm2 ENSMUSG00000049336 166 0.946 - - - - - 0.946 teneurin transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:1345184]
42. Parp8 ENSMUSG00000021725 131 0.946 - - - - - 0.946 poly (ADP-ribose) polymerase family, member 8 [Source:MGI Symbol;Acc:MGI:1098713]
43. Srpx2 ENSMUSG00000031253 68 0.945 - - - - - 0.945 sushi-repeat-containing protein, X-linked 2 [Source:MGI Symbol;Acc:MGI:1916042]
44. A330023F24Rik ENSMUSG00000096929 33 0.942 - - - - - 0.942 RIKEN cDNA A330023F24 gene [Source:MGI Symbol;Acc:MGI:2443958]
45. Cdc6 ENSMUSG00000017499 1721 0.941 - - - - - 0.941 cell division cycle 6 [Source:MGI Symbol;Acc:MGI:1345150]
46. Hacl1 ENSMUSG00000021884 169 0.941 - - - - - 0.941 2-hydroxyacyl-CoA lyase 1 [Source:MGI Symbol;Acc:MGI:1929657]
47. Hmcn1 ENSMUSG00000066842 245 0.94 - - - - - 0.940 hemicentin 1 [Source:MGI Symbol;Acc:MGI:2685047]
48. Hist1h1e ENSMUSG00000051627 604 0.939 - - - - - 0.939 histone cluster 1, H1e [Source:MGI Symbol;Acc:MGI:1931527]
49. Ush1c ENSMUSG00000030838 191 0.938 - - - - - 0.938 USH1 protein network component harmonin [Source:MGI Symbol;Acc:MGI:1919338]
50. Zkscan2 ENSMUSG00000030757 53 0.936 - - - - - 0.936 zinc finger with KRAB and SCAN domains 2 [Source:MGI Symbol;Acc:MGI:2444060]
51. Rps15-ps2 ENSMUSG00000071419 155 0.936 - - - - - 0.936 ribosomal protein S15, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3647234]
52. Sec61g ENSMUSG00000078974 132 0.934 - - - - - 0.934 SEC61, gamma subunit [Source:MGI Symbol;Acc:MGI:1202066]
53. Fbll1 ENSMUSG00000051062 57 0.932 - - 0.932 - - - fibrillarin-like 1 [Source:MGI Symbol;Acc:MGI:3034689]
54. Pou3f4 ENSMUSG00000056854 95 0.931 - - 0.931 - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
55. Cdh6 ENSMUSG00000039385 40 0.929 - - 0.929 - - - cadherin 6 [Source:MGI Symbol;Acc:MGI:107435]
56. Pdzrn4 ENSMUSG00000036218 102 0.929 - - 0.929 - - - PDZ domain containing RING finger 4 [Source:MGI Symbol;Acc:MGI:3056996]
57. Evx2 ENSMUSG00000001815 45 0.928 - - 0.928 - - - even-skipped homeobox 2 [Source:MGI Symbol;Acc:MGI:95462]
58. Cpne2 ENSMUSG00000034361 315 0.927 - - - - - 0.927 copine II [Source:MGI Symbol;Acc:MGI:2387578]
59. Fstl5 ENSMUSG00000034098 64 0.927 - - 0.927 - - - follistatin-like 5 [Source:MGI Symbol;Acc:MGI:2442179]
60. Spcs2-ps ENSMUSG00000081888 7 0.926 - - 0.926 - - - signal peptidase complex subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3650451]
61. Chrna7 ENSMUSG00000030525 7 0.926 - - 0.926 - - - cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]
62. Gale ENSMUSG00000028671 463 0.926 - - - - - 0.926 galactose-4-epimerase, UDP [Source:MGI Symbol;Acc:MGI:1921496]
63. Kcna4 ENSMUSG00000042604 14 0.926 - - 0.926 - - - potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
64. Gm10338 ENSMUSG00000094706 5 0.926 - - 0.926 - - - predicted gene 10338 [Source:MGI Symbol;Acc:MGI:3642676]
65. Zfat ENSMUSG00000022335 160 0.926 - - - - - 0.926 zinc finger and AT hook domain containing [Source:MGI Symbol;Acc:MGI:2681865]
66. Gm26861 ENSMUSG00000097009 5 0.926 - - 0.926 - - - predicted gene, 26861 [Source:MGI Symbol;Acc:MGI:5477355]
67. Gm26638 ENSMUSG00000097563 57 0.926 - - 0.926 - - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
68. Gm5321 ENSMUSG00000064231 50 0.925 - - 0.925 - - - predicted gene 5321 [Source:MGI Symbol;Acc:MGI:3645266]
69. Efhc2 ENSMUSG00000025038 12 0.925 - - 0.925 - - - EF-hand domain (C-terminal) containing 2 [Source:MGI Symbol;Acc:MGI:1921655]
70. Kcnq3 ENSMUSG00000056258 146 0.924 - - - - - 0.924 potassium voltage-gated channel, subfamily Q, member 3 [Source:MGI Symbol;Acc:MGI:1336181]
71. Dok3 ENSMUSG00000035711 71 0.924 - - - - - 0.924 docking protein 3 [Source:MGI Symbol;Acc:MGI:1351490]
72. Cdh8 ENSMUSG00000036510 33 0.924 - - 0.924 - - - cadherin 8 [Source:MGI Symbol;Acc:MGI:107434]
73. Lyz2 ENSMUSG00000069516 230 0.924 - - - - - 0.924 lysozyme 2 [Source:MGI Symbol;Acc:MGI:96897]
74. Gm12468 ENSMUSG00000083985 14 0.923 - - 0.923 - - - predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
75. Ppfia2 ENSMUSG00000053825 97 0.923 - - 0.923 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:MGI Symbol;Acc:MGI:2443834]
76. Gm16540 ENSMUSG00000090005 7 0.923 - - 0.923 - - - predicted gene 16540 [Source:MGI Symbol;Acc:MGI:4414960]
77. Gm22748 ENSMUSG00000064427 27 0.923 - - 0.923 - - - predicted gene, 22748 [Source:MGI Symbol;Acc:MGI:5452525]
78. Gm16185 ENSMUSG00000084911 290 0.923 - - 0.923 - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
79. 4930512H18Rik ENSMUSG00000086866 25 0.923 - - 0.923 - - - RIKEN cDNA 4930512H18 gene [Source:MGI Symbol;Acc:MGI:1922361]
80. Gm14706 ENSMUSG00000083482 26 0.92 - - 0.920 - - - predicted gene 14706 [Source:MGI Symbol;Acc:MGI:3646357]
81. Hpgd ENSMUSG00000031613 116 0.919 - - 0.919 - - - hydroxyprostaglandin dehydrogenase 15 (NAD) [Source:MGI Symbol;Acc:MGI:108085]
82. BC030499 ENSMUSG00000037593 40 0.919 - - 0.919 - - - cDNA sequence BC030499 [Source:MGI Symbol;Acc:MGI:2652869]
83. Ctns ENSMUSG00000005949 964 0.918 - - - - - 0.918 cystinosis, nephropathic [Source:MGI Symbol;Acc:MGI:1932872]
84. Trmt13 ENSMUSG00000033439 240 0.918 - - - - - 0.918 tRNA methyltransferase 13 [Source:MGI Symbol;Acc:MGI:1925219]
85. Rpl21-ps15 ENSMUSG00000083596 25 0.918 - - 0.918 - - - ribosomal protein L21, pseudogene 15 [Source:MGI Symbol;Acc:MGI:3705426]
86. Tdrkh ENSMUSG00000041912 78 0.918 - - 0.918 - - - tudor and KH domain containing protein [Source:MGI Symbol;Acc:MGI:1919884]
87. Gbp8 ENSMUSG00000034438 31 0.917 - - 0.917 - - - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]
88. AY074887 ENSMUSG00000044820 41 0.916 - - 0.916 - - - cDNA sequence AY074887 [Source:MGI Symbol;Acc:MGI:3575512]
89. Nlgn1 ENSMUSG00000063887 37 0.914 - - 0.914 - - - neuroligin 1 [Source:MGI Symbol;Acc:MGI:2179435]
90. Bcap29 ENSMUSG00000020650 559 0.913 - - - - - 0.913 B cell receptor associated protein 29 [Source:MGI Symbol;Acc:MGI:101917]
91. Zfp459 ENSMUSG00000055560 303 0.912 - - - - - 0.912 zinc finger protein 459 [Source:MGI Symbol;Acc:MGI:3040701]
92. Nol3 ENSMUSG00000014776 29 0.911 - - 0.911 - - - nucleolar protein 3 (apoptosis repressor with CARD domain) [Source:MGI Symbol;Acc:MGI:1925938]
93. Wdr74 ENSMUSG00000042729 669 0.911 - - - - - 0.911 WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
94. Cacng5 ENSMUSG00000040373 32 0.911 - - 0.911 - - - calcium channel, voltage-dependent, gamma subunit 5 [Source:MGI Symbol;Acc:MGI:2157946]
95. Timm8a1 ENSMUSG00000048007 39 0.911 - - 0.911 - - - translocase of inner mitochondrial membrane 8A1 [Source:MGI Symbol;Acc:MGI:1353433]
96. Kif9 ENSMUSG00000032489 32 0.908 - - 0.908 - - - kinesin family member 9 [Source:MGI Symbol;Acc:MGI:1098237]
97. Gm26871 ENSMUSG00000097311 68 0.908 - - 0.908 - - - predicted gene, 26871 [Source:MGI Symbol;Acc:MGI:5477365]
98. Gm16222 ENSMUSG00000086798 72 0.907 - - 0.907 - - - predicted gene 16222 [Source:MGI Symbol;Acc:MGI:3801901]
99. Arhgap24 ENSMUSG00000057315 241 0.906 - - - - - 0.906 Rho GTPase activating protein 24 [Source:MGI Symbol;Acc:MGI:1922647]
100. Neil1 ENSMUSG00000032298 123 0.906 - - 0.906 - - - nei endonuclease VIII-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1920024]

There are 326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA