Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Smad5

Gene Name Gene ID Reads Annotation
Smad5 ENSMUSG00000021540 4340 SMAD family member 5 [Source:MGI Symbol;Acc:MGI:1328787]







Genes with expression patterns similar to Smad5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smad5 ENSMUSG00000021540 4340 6 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 5 [Source:MGI Symbol;Acc:MGI:1328787]
2. Tuba1c ENSMUSG00000043091 6320 0.814 - 0.814 - - - - tubulin, alpha 1C [Source:MGI Symbol;Acc:MGI:1095409]
3. Pcnp ENSMUSG00000071533 6314 0.797 - 0.797 - - - - PEST proteolytic signal containing nuclear protein [Source:MGI Symbol;Acc:MGI:1923552]
4. Sigmar1 ENSMUSG00000036078 1307 0.794 - 0.794 - - - - sigma non-opioid intracellular receptor 1 [Source:MGI Symbol;Acc:MGI:1195268]
5. Lphn1 Lphn1 4184 0.79 - 0.790 - - - -
6. Snap23 ENSMUSG00000027287 1315 0.787 - 0.787 - - - - synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]
7. Nsmaf ENSMUSG00000028245 1237 0.783 - 0.783 - - - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:MGI Symbol;Acc:MGI:1341864]
8. Ergic1 ENSMUSG00000001576 3052 0.782 - 0.782 - - - - endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 [Source:MGI Symbol;Acc:MGI:1914708]
9. Snx5 ENSMUSG00000027423 3464 0.777 - 0.777 - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
10. Tsr2 ENSMUSG00000025264 1165 0.777 - 0.777 - - - - TSR2 20S rRNA accumulation [Source:MGI Symbol;Acc:MGI:1916749]
11. Zc3h18 ENSMUSG00000017478 2132 0.774 - 0.774 - - - - zinc finger CCCH-type containing 18 [Source:MGI Symbol;Acc:MGI:1923264]
12. Tada3 ENSMUSG00000048930 1021 0.774 - 0.774 - - - - transcriptional adaptor 3 [Source:MGI Symbol;Acc:MGI:1915724]
13. Zfand6 ENSMUSG00000030629 5868 0.772 - 0.772 - - - - zinc finger, AN1-type domain 6 [Source:MGI Symbol;Acc:MGI:1929510]
14. Pold2 ENSMUSG00000020471 1749 0.77 - 0.770 - - - - polymerase (DNA directed), delta 2, regulatory subunit [Source:MGI Symbol;Acc:MGI:1097163]
15. Mapk7 ENSMUSG00000001034 2601 0.77 - 0.770 - - - - mitogen-activated protein kinase 7 [Source:MGI Symbol;Acc:MGI:1346347]
16. Trabd ENSMUSG00000015363 770 0.769 - 0.769 - - - - TraB domain containing [Source:MGI Symbol;Acc:MGI:1915226]
17. Mdn1 ENSMUSG00000058006 3308 0.769 - 0.769 - - - - midasin AAA ATPase 1 [Source:MGI Symbol;Acc:MGI:1926159]
18. Psmd12 ENSMUSG00000020720 2897 0.768 - 0.768 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:MGI Symbol;Acc:MGI:1914247]
19. Hist1h4i ENSMUSG00000060639 582 0.768 - 0.768 - - - - histone cluster 1, H4i [Source:MGI Symbol;Acc:MGI:2448432]
20. Nbn ENSMUSG00000028224 1101 0.765 - 0.765 - - - - nibrin [Source:MGI Symbol;Acc:MGI:1351625]
21. Alg8 ENSMUSG00000035704 1502 0.765 - 0.765 - - - - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
22. Cdca7l ENSMUSG00000021175 640 0.764 - 0.764 - - - - cell division cycle associated 7 like [Source:MGI Symbol;Acc:MGI:2384982]
23. Gm11539 ENSMUSG00000083337 746 0.764 - 0.764 - - - - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
24. Tnfaip6 ENSMUSG00000053475 614 0.761 - 0.761 - - - - tumor necrosis factor alpha induced protein 6 [Source:MGI Symbol;Acc:MGI:1195266]
25. Gm6415 Gm6415 635 0.76 - 0.760 - - - -
26. Mcu ENSMUSG00000009647 477 0.76 - 0.760 - - - - mitochondrial calcium uniporter [Source:MGI Symbol;Acc:MGI:3026965]
27. Rnf7 ENSMUSG00000051234 6537 0.759 - 0.759 - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
28. Cdipt ENSMUSG00000030682 1360 0.759 - 0.759 - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:MGI Symbol;Acc:MGI:105491]
29. Pccb ENSMUSG00000032527 1755 0.758 - 0.758 - - - - propionyl Coenzyme A carboxylase, beta polypeptide [Source:MGI Symbol;Acc:MGI:1914154]
30. Scfd1 ENSMUSG00000020952 1076 0.758 - 0.758 - - - - Sec1 family domain containing 1 [Source:MGI Symbol;Acc:MGI:1924233]
31. Ankrd13c ENSMUSG00000039988 429 0.757 - 0.757 - - - - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
32. Nol9 ENSMUSG00000028948 3331 0.757 - 0.757 - - - - nucleolar protein 9 [Source:MGI Symbol;Acc:MGI:1921285]
33. Gpsm2 ENSMUSG00000027883 1924 0.756 - 0.756 - - - - G-protein signalling modulator 2 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1923373]
34. Ldoc1l 651 0.756 - 0.756 - - - - leucine zipper, down-regulated in cancer 1-like
35. Chst2 ENSMUSG00000033350 662 0.756 - 0.756 - - - - carbohydrate sulfotransferase 2 [Source:MGI Symbol;Acc:MGI:1891160]
36. Wasl ENSMUSG00000029684 2573 0.756 - 0.756 - - - - Wiskott-Aldrich syndrome-like (human) [Source:MGI Symbol;Acc:MGI:1920428]
37. Fam101b 1093 0.755 - 0.755 - - - - family with sequence similarity 101, member B
38. Nlgn2 ENSMUSG00000051790 2862 0.755 - 0.755 - - - - neuroligin 2 [Source:MGI Symbol;Acc:MGI:2681835]
39. Trip10 ENSMUSG00000019487 485 0.755 - 0.755 - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
40. Ing5 ENSMUSG00000026283 657 0.755 0.755 - - - - - inhibitor of growth family, member 5 [Source:MGI Symbol;Acc:MGI:1922816]
41. Creld1 ENSMUSG00000030284 502 0.755 - 0.755 - - - - cysteine-rich with EGF-like domains 1 [Source:MGI Symbol;Acc:MGI:2152539]
42. Mbd1 ENSMUSG00000024561 619 0.755 - 0.755 - - - - methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
43. Leprotl1 ENSMUSG00000031513 1832 0.755 - 0.755 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
44. Xrn1 ENSMUSG00000032410 667 0.753 - 0.753 - - - - 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
45. Wrnip1 ENSMUSG00000021400 1189 0.753 - 0.753 - - - - Werner helicase interacting protein 1 [Source:MGI Symbol;Acc:MGI:1926153]
46. Rnasel ENSMUSG00000066800 396 0.753 - 0.753 - - - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
47. Nckap5l ENSMUSG00000023009 1387 0.753 - 0.753 - - - - NCK-associated protein 5-like [Source:MGI Symbol;Acc:MGI:3609653]
48. Sirt4 ENSMUSG00000029524 437 0.753 - 0.753 - - - - sirtuin 4 [Source:MGI Symbol;Acc:MGI:1922637]
49. Krba1 ENSMUSG00000042810 737 0.752 - 0.752 - - - - KRAB-A domain containing 1 [Source:MGI Symbol;Acc:MGI:1925077]
50. Trmt10c ENSMUSG00000044763 662 0.752 - 0.752 - - - - tRNA methyltransferase 10C [Source:MGI Symbol;Acc:MGI:1196261]
51. A130010J15Rik ENSMUSG00000079144 763 0.751 - 0.751 - - - - RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
52. Heatr1 ENSMUSG00000050244 3121 0.75 - 0.750 - - - - HEAT repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442524]
53. Pmm2 ENSMUSG00000022711 580 0.75 - 0.750 - - - - phosphomannomutase 2 [Source:MGI Symbol;Acc:MGI:1859214]
54. Nif3l1 ENSMUSG00000026036 1546 0.75 - 0.750 - - - - Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
55. Upf3a ENSMUSG00000038398 402 0.749 - 0.749 - - - - UPF3 regulator of nonsense transcripts homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1914281]
56. Ndel1 ENSMUSG00000018736 3400 0.749 - 0.749 - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
57. Sqstm1 ENSMUSG00000015837 4567 0.749 - 0.749 - - - - sequestosome 1 [Source:MGI Symbol;Acc:MGI:107931]
58. Snrnp48 ENSMUSG00000021431 2417 0.749 - 0.749 - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:MGI Symbol;Acc:MGI:1915047]
59. Mavs ENSMUSG00000037523 581 0.749 - 0.749 - - - - mitochondrial antiviral signaling protein [Source:MGI Symbol;Acc:MGI:2444773]
60. Fxr1 ENSMUSG00000027680 2134 0.749 - 0.749 - - - - fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860]
61. R3hcc1l ENSMUSG00000025184 576 0.748 - 0.748 - - - - R3H domain and coiled-coil containing 1 like [Source:MGI Symbol;Acc:MGI:1196316]
62. Ccm2 ENSMUSG00000000378 851 0.748 - 0.748 - - - - cerebral cavernous malformation 2 [Source:MGI Symbol;Acc:MGI:2384924]
63. Gnptab ENSMUSG00000035311 630 0.747 - 0.747 - - - - N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits [Source:MGI Symbol;Acc:MGI:3643902]
64. Eif4enif1 ENSMUSG00000020454 1840 0.747 - 0.747 - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:MGI Symbol;Acc:MGI:1921453]
65. Ccdc132 Ccdc132 1261 0.745 - 0.745 - - - -
66. Smad7 ENSMUSG00000025880 384 0.745 - 0.745 - - - - SMAD family member 7 [Source:MGI Symbol;Acc:MGI:1100518]
67. 4930402H24Rik ENSMUSG00000027309 2029 0.745 - 0.745 - - - - RIKEN cDNA 4930402H24 gene [Source:MGI Symbol;Acc:MGI:1923029]
68. Ntn3 661 0.745 - 0.745 - - - - netrin 3
69. AI987944 ENSMUSG00000056383 1199 0.743 - 0.743 - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
70. Vps52 ENSMUSG00000024319 1049 0.743 - 0.743 - - - - VPS52 GARP complex subunit [Source:MGI Symbol;Acc:MGI:1330304]
71. Rps15a-ps6 ENSMUSG00000083022 1541 0.742 - 0.742 - - - - ribosomal protein S15A, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3650298]
72. Abhd5 ENSMUSG00000032540 461 0.742 - 0.742 - - - - abhydrolase domain containing 5 [Source:MGI Symbol;Acc:MGI:1914719]
73. Zfp28 ENSMUSG00000062861 1174 0.741 - 0.741 - - - - zinc finger protein 28 [Source:MGI Symbol;Acc:MGI:99175]
74. Rpusd1 ENSMUSG00000041199 821 0.741 - 0.741 - - - - RNA pseudouridylate synthase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919186]
75. Pagr1a ENSMUSG00000030680 661 0.74 - 0.740 - - - - PAXIP1 associated glutamate rich protein 1A [Source:MGI Symbol;Acc:MGI:1914528]
76. Tmem216 ENSMUSG00000024667 1035 0.74 - 0.740 - - - - transmembrane protein 216 [Source:MGI Symbol;Acc:MGI:1920020]
77. Zbtb17 ENSMUSG00000006215 855 0.739 - 0.739 - - - - zinc finger and BTB domain containing 17 [Source:MGI Symbol;Acc:MGI:107410]
78. Ankrd13b ENSMUSG00000037907 810 0.739 - 0.739 - - - - ankyrin repeat domain 13b [Source:MGI Symbol;Acc:MGI:2144501]
79. Tlcd2 ENSMUSG00000038217 865 0.739 - 0.739 - - - - TLC domain containing 2 [Source:MGI Symbol;Acc:MGI:1917141]
80. Msh2 ENSMUSG00000024151 1663 0.739 - 0.739 - - - - mutS homolog 2 [Source:MGI Symbol;Acc:MGI:101816]
81. Med22 ENSMUSG00000015776 736 0.739 - 0.739 - - - - mediator complex subunit 22 [Source:MGI Symbol;Acc:MGI:98446]
82. R3hdm1 ENSMUSG00000056211 2825 0.739 - 0.739 - - - - R3H domain containing 1 [Source:MGI Symbol;Acc:MGI:2448514]
83. Taf3 ENSMUSG00000025782 1481 0.738 - 0.738 - - - - TATA-box binding protein associated factor 3 [Source:MGI Symbol;Acc:MGI:2388097]
84. Upk1a ENSMUSG00000006313 293 0.738 - 0.738 - - - - uroplakin 1A [Source:MGI Symbol;Acc:MGI:98911]
85. Crnkl1 ENSMUSG00000001767 959 0.738 - 0.738 - - - - crooked neck pre-mRNA splicing factor 1 [Source:MGI Symbol;Acc:MGI:1914127]
86. Mtmr3 ENSMUSG00000034354 1240 0.738 - 0.738 - - - - myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
87. Reep4 ENSMUSG00000033589 2187 0.738 - 0.738 - - - - receptor accessory protein 4 [Source:MGI Symbol;Acc:MGI:1919799]
88. Bod1l ENSMUSG00000061755 2689 0.738 - 0.738 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
89. Scamp2 ENSMUSG00000040188 1163 0.737 - 0.737 - - - - secretory carrier membrane protein 2 [Source:MGI Symbol;Acc:MGI:1346518]
90. Usp49 ENSMUSG00000090115 2490 0.737 - 0.737 - - - - ubiquitin specific peptidase 49 [Source:MGI Symbol;Acc:MGI:2685391]
91. Pnpla8 ENSMUSG00000036257 649 0.737 - 0.737 - - - - patatin-like phospholipase domain containing 8 [Source:MGI Symbol;Acc:MGI:1914702]
92. Leo1 ENSMUSG00000042487 811 0.736 - 0.736 - - - - Leo1, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2685031]
93. Egln3 ENSMUSG00000035105 1004 0.736 - 0.736 - - - - egl-9 family hypoxia-inducible factor 3 [Source:MGI Symbol;Acc:MGI:1932288]
94. Mbp ENSMUSG00000041607 555 0.735 - 0.735 - - - - myelin basic protein [Source:MGI Symbol;Acc:MGI:96925]
95. Relb ENSMUSG00000002983 1128 0.735 - 0.735 - - - - avian reticuloendotheliosis viral (v-rel) oncogene related B [Source:MGI Symbol;Acc:MGI:103289]
96. Trim62 ENSMUSG00000041000 867 0.735 - 0.735 - - - - tripartite motif-containing 62 [Source:MGI Symbol;Acc:MGI:1914775]
97. Wwc1 ENSMUSG00000018849 410 0.735 - 0.735 - - - - WW, C2 and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:2388637]
98. Khnyn ENSMUSG00000047153 196 0.735 - 0.735 - - - - KH and NYN domain containing [Source:MGI Symbol;Acc:MGI:2451333]
99. Bop1 ENSMUSG00000022557 5004 0.735 - 0.735 - - - - block of proliferation 1 [Source:MGI Symbol;Acc:MGI:1334460]
100. Cmtm4 ENSMUSG00000096188 1380 0.734 - 0.734 - - - - CKLF-like MARVEL transmembrane domain containing 4 [Source:MGI Symbol;Acc:MGI:2142888]

There are 95 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA