Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Smad4

Gene Name Gene ID Reads Annotation
Smad4 ENSMUSG00000024515 3795 SMAD family member 4 [Source:MGI Symbol;Acc:MGI:894293]







Genes with expression patterns similar to Smad4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Smad4 ENSMUSG00000024515 3795 6 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 4 [Source:MGI Symbol;Acc:MGI:894293]
2. Hs6st1 ENSMUSG00000045216 2389 1.565 - 0.815 - - - 0.750 heparan sulfate 6-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1354958]
3. Rnf5 ENSMUSG00000015478 1763 1.551 - 0.763 - - - 0.788 ring finger protein 5 [Source:MGI Symbol;Acc:MGI:1860076]
4. Apbb1 ENSMUSG00000037032 1742 1.547 - 0.829 - - - 0.718 amyloid beta (A4) precursor protein-binding, family B, member 1 [Source:MGI Symbol;Acc:MGI:107765]
5. Mcat ENSMUSG00000048755 1758 1.541 - 0.774 - - - 0.767 malonyl CoA:ACP acyltransferase (mitochondrial) [Source:MGI Symbol;Acc:MGI:2388651]
6. Zfp280d ENSMUSG00000038535 4540 1.524 - 0.761 - - - 0.763 zinc finger protein 280D [Source:MGI Symbol;Acc:MGI:2384583]
7. Syncrip ENSMUSG00000032423 12993 1.51 0.716 0.794 - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]
8. Tomm20 ENSMUSG00000093904 7015 1.505 - 0.754 - - - 0.751 translocase of outer mitochondrial membrane 20 [Source:MGI Symbol;Acc:MGI:1915202]
9. Phb ENSMUSG00000038845 3385 1.485 - 0.768 - - - 0.717 prohibitin [Source:MGI Symbol;Acc:MGI:97572]
10. Gm9892 ENSMUSG00000052825 6048 1.445 0.722 0.723 - - - - predicted gene 9892 [Source:MGI Symbol;Acc:MGI:3701610]
11. Mta2 ENSMUSG00000071646 5360 0.948 - 0.948 - - - - metastasis-associated gene family, member 2 [Source:MGI Symbol;Acc:MGI:1346340]
12. Hat1 ENSMUSG00000027018 4642 0.94 - 0.940 - - - - histone aminotransferase 1 [Source:MGI Symbol;Acc:MGI:96013]
13. Gm3550 ENSMUSG00000078240 469 0.94 - 0.940 - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
14. Gm12751 ENSMUSG00000062554 1377 0.939 - 0.939 - - - - predicted gene 12751 [Source:MGI Symbol;Acc:MGI:3651049]
15. Gle1 ENSMUSG00000019715 2053 0.93 - 0.930 - - - - GLE1 RNA export mediator (yeast) [Source:MGI Symbol;Acc:MGI:1921662]
16. Uhmk1 ENSMUSG00000026667 3184 0.908 - 0.908 - - - - U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
17. Tmem30a ENSMUSG00000032328 4977 0.907 - 0.907 - - - - transmembrane protein 30A [Source:MGI Symbol;Acc:MGI:106402]
18. Srsf2 ENSMUSG00000034120 1325 0.907 - 0.907 - - - - serine/arginine-rich splicing factor 2 [Source:MGI Symbol;Acc:MGI:98284]
19. Chmp5 ENSMUSG00000028419 5927 0.897 - 0.897 - - - - charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
20. 4632427E13Rik ENSMUSG00000074024 3303 0.887 - 0.887 - - - - RIKEN cDNA 4632427E13 gene [Source:MGI Symbol;Acc:MGI:1915436]
21. Trpc4ap ENSMUSG00000038324 3417 0.883 - 0.883 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:MGI Symbol;Acc:MGI:1930751]
22. Gm15148 ENSMUSG00000082423 4827 0.882 - 0.882 - - - - predicted gene 15148 [Source:MGI Symbol;Acc:MGI:3705350]
23. Ndufb11 ENSMUSG00000031059 4781 0.879 - - - - - 0.879 NADH:ubiquinone oxidoreductase subunit B11 [Source:MGI Symbol;Acc:MGI:1349919]
24. Lamtor4 ENSMUSG00000050552 1199 0.872 - 0.872 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:MGI Symbol;Acc:MGI:1913346]
25. Rad51ap1 ENSMUSG00000030346 1698 0.867 - - - - - 0.867 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
26. Afg3l2 ENSMUSG00000024527 3339 0.859 - 0.859 - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
27. Arl13b ENSMUSG00000022911 824 0.858 - - - - - 0.858 ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
28. Ppcs ENSMUSG00000028636 669 0.857 - - - - - 0.857 phosphopantothenoylcysteine synthetase [Source:MGI Symbol;Acc:MGI:1915237]
29. Mbd1 ENSMUSG00000024561 619 0.852 - - - - - 0.852 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
30. D17H6S56E-5 1432 0.851 - - - - - 0.851 DNA segment, Chr 17, human D6S56E 5, transcript variant X2
31. Tead1 ENSMUSG00000055320 9676 0.85 - 0.850 - - - - TEA domain family member 1 [Source:MGI Symbol;Acc:MGI:101876]
32. Cish ENSMUSG00000032578 239 0.85 - - - - - 0.850 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
33. Vezf1 ENSMUSG00000018377, ENSMUSG00000098546 6251 0.849 - 0.849 - - - - vascular endothelial zinc finger 1 [Source:MGI Symbol;Acc:MGI:1313291]
34. Stam2 ENSMUSG00000055371 1123 0.849 - - - - - 0.849 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:MGI Symbol;Acc:MGI:1929100]
35. Pdss2 ENSMUSG00000038240 749 0.849 - - - - - 0.849 prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615]
36. Ube2c ENSMUSG00000001403 11085 0.849 - 0.849 - - - - ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]
37. Mettl13 ENSMUSG00000026694 1671 0.848 - - - - - 0.848 methyltransferase like 13 [Source:MGI Symbol;Acc:MGI:1918699]
38. Git1 ENSMUSG00000011877 5458 0.847 - 0.847 - - - - G protein-coupled receptor kinase-interactor 1 [Source:MGI Symbol;Acc:MGI:1927140]
39. Sox4 ENSMUSG00000076431 8757 0.847 - 0.847 - - - - SRY (sex determining region Y)-box 4 [Source:MGI Symbol;Acc:MGI:98366]
40. Lgr5 ENSMUSG00000020140 516 0.846 - - - - - 0.846 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
41. Seh1l ENSMUSG00000079614 7707 0.846 - 0.846 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
42. 2310015A10Rik ENSMUSG00000097729 199 0.845 - - - - - 0.845 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
43. Ttc7 ENSMUSG00000036918 154 0.845 - - - - - 0.845 tetratricopeptide repeat domain 7 [Source:MGI Symbol;Acc:MGI:1920999]
44. Ccdc91 ENSMUSG00000030301 664 0.845 - - - - - 0.845 coiled-coil domain containing 91 [Source:MGI Symbol;Acc:MGI:1914265]
45. Atp6ap1 ENSMUSG00000019087 614 0.844 - - - - - 0.844 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
46. Acsl6 ENSMUSG00000020333 249 0.844 - - - - - 0.844 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
47. Znhit2 ENSMUSG00000075227 611 0.843 - - - - - 0.843 zinc finger, HIT domain containing 2 [Source:MGI Symbol;Acc:MGI:1352481]
48. Dtd1 ENSMUSG00000027430 447 0.843 - - - - - 0.843 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
49. Wipi1 ENSMUSG00000041895 3789 0.843 - - - - - 0.843 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
50. 9130023H24Rik ENSMUSG00000062944 258 0.842 - - - - - 0.842 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
51. Paxbp1 ENSMUSG00000022974 322 0.842 - - - - - 0.842 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
52. Rpl21 ENSMUSG00000041453 17373 0.84 - - - - - 0.840 ribosomal protein L21 [Source:MGI Symbol;Acc:MGI:1278340]
53. Pfkfb2 ENSMUSG00000026409 480 0.84 - - - - - 0.840 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
54. Dusp2 ENSMUSG00000027368 534 0.84 - - - - - 0.840 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
55. Lhpp ENSMUSG00000030946 365 0.84 - - - - - 0.840 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
56. Rrp8 ENSMUSG00000030888 887 0.84 - - - - - 0.840 ribosomal RNA processing 8, methyltransferase, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1914251]
57. Gm13476 Gm13476 165 0.839 - - - - - 0.839
58. Hbb-bs ENSMUSG00000052305 2551 0.839 - - - - - 0.839 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
59. Gm13910 ENSMUSG00000063684 126 0.838 - - - - - 0.838 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
60. Fam131a ENSMUSG00000050821 113 0.838 - - - - - 0.838 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
61. 2310036O22Rik 7503 0.838 - - - - - 0.838 RIKEN cDNA 2310036O22 gene, transcript variant X1
62. Aspscr1 ENSMUSG00000025142 694 0.837 - - - - - 0.837 alveolar soft part sarcoma chromosome region, candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1916188]
63. Hes3 ENSMUSG00000028946 73 0.837 - - - - - 0.837 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
64. Rnf185 ENSMUSG00000020448 2485 0.837 - 0.837 - - - - ring finger protein 185 [Source:MGI Symbol;Acc:MGI:1922078]
65. Trak1 ENSMUSG00000032536 705 0.837 - - - - - 0.837 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
66. Phf19 ENSMUSG00000026873 83 0.836 - - - - - 0.836 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
67. Polr2f ENSMUSG00000033020 8300 0.836 - 0.836 - - - - polymerase (RNA) II (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1349393]
68. 0610009O20Rik 485 0.835 - 0.835 - - - - RIKEN cDNA 0610009O20 gene
69. 4930452B06Rik ENSMUSG00000021747 971 0.835 - 0.835 - - - - RIKEN cDNA 4930452B06 gene [Source:MGI Symbol;Acc:MGI:1926154]
70. AI429214 ENSMUSG00000074384 276 0.835 - 0.835 - - - - expressed sequence AI429214 [Source:MGI Symbol;Acc:MGI:2142538]
71. Upp1 ENSMUSG00000020407 279 0.835 - 0.835 - - - - uridine phosphorylase 1 [Source:MGI Symbol;Acc:MGI:1097668]
72. Gm10307 ENSMUSG00000101093 159 0.835 - - - - - 0.835 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
73. 5930412G12Rik ENSMUSG00000072591 503 0.835 - - - - - 0.835 RIKEN cDNA 5930412G12 gene [Source:MGI Symbol;Acc:MGI:2442398]
74. Gm24451 ENSMUSG00000065287 57 0.835 - - - - - 0.835 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
75. Hapln3 ENSMUSG00000030606 185 0.835 - 0.835 - - - - hyaluronan and proteoglycan link protein 3 [Source:MGI Symbol;Acc:MGI:1914916]
76. Gpsm1 ENSMUSG00000026930 656 0.835 - - - - - 0.835 G-protein signalling modulator 1 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1915089]
77. Hcls1 ENSMUSG00000022831 213 0.835 - 0.835 - - - - hematopoietic cell specific Lyn substrate 1 [Source:MGI Symbol;Acc:MGI:104568]
78. Immp2l ENSMUSG00000056899 263 0.834 - 0.834 - - - - IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2135611]
79. Gm14286 ENSMUSG00000087445 166 0.834 - - - - - 0.834 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
80. Ctla2a ENSMUSG00000044258 507 0.834 - - - - - 0.834 cytotoxic T lymphocyte-associated protein 2 alpha [Source:MGI Symbol;Acc:MGI:88554]
81. Hddc2 ENSMUSG00000000295 1096 0.834 - - - - - 0.834 HD domain containing 2 [Source:MGI Symbol;Acc:MGI:1916942]
82. Gm14165 ENSMUSG00000081434 180 0.834 - 0.834 - - - - predicted gene 14165 [Source:MGI Symbol;Acc:MGI:3650537]
83. Ryk ENSMUSG00000032547 2629 0.834 - 0.834 - - - - receptor-like tyrosine kinase [Source:MGI Symbol;Acc:MGI:101766]
84. 1700052N19Rik 1700052N19Rik 913 0.834 - - - - - 0.834
85. Noc2l ENSMUSG00000095567 594 0.834 - 0.834 - - - - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
86. Zfp961 ENSMUSG00000052446 869 0.834 - 0.834 - - - - zinc finger protein 961 [Source:MGI Symbol;Acc:MGI:3583954]
87. Spire2 ENSMUSG00000010154 178 0.834 - 0.834 - - - - spire type actin nucleation factor 2 [Source:MGI Symbol;Acc:MGI:2446256]
88. Rtn4r ENSMUSG00000043811, ENSMUSG00000111113 196 0.834 - 0.834 - - - - reticulon 4 receptor [Source:MGI Symbol;Acc:MGI:2136886]
89. Murc 198 0.834 - 0.834 - - - - muscle-related coiled-coil protein
90. Rnf214 ENSMUSG00000042790 1144 0.834 - 0.834 - - - - ring finger protein 214 [Source:MGI Symbol;Acc:MGI:2444451]
91. Cul5 ENSMUSG00000032030 1885 0.834 - 0.834 - - - - cullin 5 [Source:MGI Symbol;Acc:MGI:1922967]
92. Ube2t ENSMUSG00000026429 808 0.834 - 0.834 - - - - ubiquitin-conjugating enzyme E2T [Source:MGI Symbol;Acc:MGI:1914446]
93. Snx19 ENSMUSG00000031993 550 0.834 - 0.834 - - - - sorting nexin 19 [Source:MGI Symbol;Acc:MGI:1921581]
94. Cep63 ENSMUSG00000032534 639 0.834 - 0.834 - - - - centrosomal protein 63 [Source:MGI Symbol;Acc:MGI:2158560]
95. Il17d ENSMUSG00000050222 119 0.833 - - - - - 0.833 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
96. Zzef1 ENSMUSG00000055670 953 0.833 - - - - - 0.833 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
97. Mvk ENSMUSG00000041939 790 0.833 - 0.833 - - - - mevalonate kinase [Source:MGI Symbol;Acc:MGI:107624]
98. Fam102a ENSMUSG00000039157 428 0.833 - 0.833 - - - - family with sequence similarity 102, member A [Source:MGI Symbol;Acc:MGI:2138935]
99. Utp20 ENSMUSG00000004356 1170 0.833 - 0.833 - - - - UTP20 small subunit processome component [Source:MGI Symbol;Acc:MGI:1917933]
100. Sh3rf2 ENSMUSG00000057719 60 0.833 - - - - - 0.833 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]

There are 450 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA