Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sln

Gene Name Gene ID Reads Annotation
Sln ENSMUSG00000042045 405 sarcolipin [Source:MGI Symbol;Acc:MGI:1913652]







Genes with expression patterns similar to Sln

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sln ENSMUSG00000042045 405 6 1.000 1.000 1.000 1.000 1.000 1.000 sarcolipin [Source:MGI Symbol;Acc:MGI:1913652]
2. Myh3 ENSMUSG00000020908 1729 3.209 - 0.856 0.793 - 0.766 0.794 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
3. Tnnt2 ENSMUSG00000026414 1982 3.1 - 0.884 0.738 - 0.737 0.741 troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
4. Acta1 ENSMUSG00000031972 1386 3.038 - 0.731 0.748 - 0.826 0.733 actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
5. Tpm2 ENSMUSG00000028464 1803 2.405 - - 0.797 - 0.870 0.738 tropomyosin 2, beta [Source:MGI Symbol;Acc:MGI:98810]
6. Tnnc1 ENSMUSG00000091898 572 2.365 - 0.750 0.776 - 0.839 - troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]
7. Actc1 ENSMUSG00000068614 13555 1.634 - - - - 0.869 0.765 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
8. Mylpf ENSMUSG00000030672 5024 1.632 - - 0.796 - 0.836 - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
9. Tmem8c 204 1.61 - - 0.797 - 0.813 - transmembrane protein 8C, transcript variant 1
10. Myog ENSMUSG00000026459 855 1.6 - - - - 0.838 0.762 myogenin [Source:MGI Symbol;Acc:MGI:97276]
11. Casq2 ENSMUSG00000027861 587 1.582 0.816 0.766 - - - - calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
12. Tnnc2 ENSMUSG00000017300 2196 1.577 - - - - 0.819 0.758 troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
13. Uts2b ENSMUSG00000056423 294 1.491 0.782 0.709 - - - - urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
14. Synpo2l ENSMUSG00000039376 565 1.438 - - 0.736 - - 0.702 synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
15. Nkx6-1 ENSMUSG00000035187 377 1.437 0.718 0.719 - - - - NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
16. Tnnt1 ENSMUSG00000064179 836 0.862 - - - - 0.862 - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
17. B3galt4 ENSMUSG00000067370 28 0.86 0.860 - - - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1859517]
18. A830009L08Rik ENSMUSG00000097182 12 0.86 0.860 - - - - - RIKEN cDNA A830009L08 gene [Source:MGI Symbol;Acc:MGI:2443762]
19. Gm13015 ENSMUSG00000070834 1 0.86 0.860 - - - - - predicted gene 13015 [Source:MGI Symbol;Acc:MGI:3651767]
20. Gm26479 ENSMUSG00000084569 1 0.86 0.860 - - - - - predicted gene, 26479 [Source:MGI Symbol;Acc:MGI:5456256]
21. Ifi204 ENSMUSG00000073489 8 0.86 0.860 - - - - - interferon activated gene 204 [Source:MGI Symbol;Acc:MGI:96429]
22. Mug1 ENSMUSG00000059908 5 0.86 0.860 - - - - - murinoglobulin 1 [Source:MGI Symbol;Acc:MGI:99837]
23. Bcas1 ENSMUSG00000013523 21 0.86 0.860 - - - - - breast carcinoma amplified sequence 1 [Source:MGI Symbol;Acc:MGI:1924210]
24. Gm5942 ENSMUSG00000083561 2 0.86 0.860 - - - - - predicted gene 5942 [Source:MGI Symbol;Acc:MGI:3646003]
25. 2610204G07Rik ENSMUSG00000084860 5 0.86 0.860 - - - - - RIKEN cDNA 2610204G07 gene [Source:MGI Symbol;Acc:MGI:1919718]
26. Chrna10 ENSMUSG00000066279 1 0.86 0.860 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 10 [Source:MGI Symbol;Acc:MGI:3609260]
27. Vsx1 ENSMUSG00000033080 23 0.86 0.860 - - - - - visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
28. Aldh3b2 ENSMUSG00000075296 33 0.86 0.860 - - - - - aldehyde dehydrogenase 3 family, member B2 [Source:MGI Symbol;Acc:MGI:2147613]
29. Gm2962 ENSMUSG00000089838 13 0.86 0.860 - - - - - predicted pseudogene 2962 [Source:MGI Symbol;Acc:MGI:3781140]
30. Gm20782 Gm20782 1 0.86 0.860 - - - - -
31. Ms4a15 ENSMUSG00000067571 5 0.86 0.860 - - - - - membrane-spanning 4-domains, subfamily A, member 15 [Source:MGI Symbol;Acc:MGI:3617853]
32. Shank1 ENSMUSG00000038738 19 0.86 0.860 - - - - - SH3 and multiple ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:3613677]
33. Smim18 ENSMUSG00000094500 31 0.86 0.860 - - - - - small integral membrane protein 18 [Source:MGI Symbol;Acc:MGI:1919882]
34. Gm5451 ENSMUSG00000095847 4 0.86 0.860 - - - - - predicted gene 5451 [Source:MGI Symbol;Acc:MGI:3643790]
35. Gm13135 ENSMUSG00000082925 3 0.86 0.860 - - - - - predicted gene 13135 [Source:MGI Symbol;Acc:MGI:3650404]
36. Agrp ENSMUSG00000005705 6 0.86 0.860 - - - - - agouti related neuropeptide [Source:MGI Symbol;Acc:MGI:892013]
37. 6430562O15Rik ENSMUSG00000097828 27 0.86 0.860 - - - - - RIKEN cDNA 6430562O15 gene [Source:MGI Symbol;Acc:MGI:2444982]
38. Gm16129 ENSMUSG00000085290 1 0.86 0.860 - - - - - predicted gene 16129 [Source:MGI Symbol;Acc:MGI:3801947]
39. Gm12866 ENSMUSG00000066060 3 0.86 0.860 - - - - - predicted gene 12866 [Source:MGI Symbol;Acc:MGI:3649462]
40. Gtf2a1l ENSMUSG00000024154 7 0.86 0.860 - - - - - general transcription factor IIA, 1-like [Source:MGI Symbol;Acc:MGI:1919078]
41. A230005M16Rik ENSMUSG00000087612 12 0.86 0.860 - - - - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
42. Gm20636 ENSMUSG00000093637 1 0.86 0.860 - - - - - predicted gene 20636 [Source:MGI Symbol;Acc:MGI:5313083]
43. Rrad ENSMUSG00000031880 27 0.86 0.860 - - - - - Ras-related associated with diabetes [Source:MGI Symbol;Acc:MGI:1930943]
44. Krt1 ENSMUSG00000046834 15 0.86 0.860 - - - - - keratin 1 [Source:MGI Symbol;Acc:MGI:96698]
45. Gm26397 ENSMUSG00000065637 1 0.86 0.860 - - - - - predicted gene, 26397 [Source:MGI Symbol;Acc:MGI:5456174]
46. 4933422H20Rik 4933422H20Rik 7 0.86 0.860 - - - - -
47. Oas1e ENSMUSG00000066867 1 0.86 0.860 - - - - - 2'-5' oligoadenylate synthetase 1E [Source:MGI Symbol;Acc:MGI:2180856]
48. Mmp25 ENSMUSG00000023903 6 0.86 0.860 - - - - - matrix metallopeptidase 25 [Source:MGI Symbol;Acc:MGI:2443938]
49. Abcc8 ENSMUSG00000040136 63 0.86 0.860 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:MGI Symbol;Acc:MGI:1352629]
50. Gm25099 ENSMUSG00000095676 10 0.86 0.860 - - - - - predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
51. Gm11410 ENSMUSG00000083219 1 0.86 0.860 - - - - - predicted gene 11410 [Source:MGI Symbol;Acc:MGI:3652015]
52. Gm17750 ENSMUSG00000098087 25 0.86 0.860 - - - - - predicted gene, 17750 [Source:MGI Symbol;Acc:MGI:5009828]
53. Gm11127 ENSMUSG00000079492 17 0.86 0.860 - - - - - predicted gene 11127 [Source:MGI Symbol;Acc:MGI:3779381]
54. F7 ENSMUSG00000031443 10 0.86 0.860 - - - - - coagulation factor VII [Source:MGI Symbol;Acc:MGI:109325]
55. Slc25a48 ENSMUSG00000021509 9 0.86 0.860 - - - - - solute carrier family 25, member 48 [Source:MGI Symbol;Acc:MGI:2145373]
56. 2410088K16Rik 2410088K16Rik 5 0.86 0.860 - - - - -
57. Eomes ENSMUSG00000032446 9 0.86 0.860 - - - - - eomesodermin [Source:MGI Symbol;Acc:MGI:1201683]
58. Gm10439 ENSMUSG00000072923 1 0.86 0.860 - - - - - predicted gene 10439 [Source:MGI Symbol;Acc:MGI:3710525]
59. 2310042E22Rik 2310042E22Rik 17 0.86 0.860 - - - - -
60. Gm1553 ENSMUSG00000094186 1 0.86 0.860 - - - - - predicted gene 1553 [Source:MGI Symbol;Acc:MGI:2686399]
61. Gm23547 ENSMUSG00000088835 11 0.86 0.860 - - - - - predicted gene, 23547 [Source:MGI Symbol;Acc:MGI:5453324]
62. Gm3644 Gm3644 2 0.86 0.860 - - - - -
63. Gm15809 ENSMUSG00000090135 2 0.86 0.860 - - - - - predicted gene 15809 [Source:MGI Symbol;Acc:MGI:3802046]
64. Tnfsf10 ENSMUSG00000039304 1 0.86 0.860 - - - - - tumor necrosis factor (ligand) superfamily, member 10 [Source:MGI Symbol;Acc:MGI:107414]
65. Cecr6 20 0.86 0.860 - - - - - cat eye syndrome chromosome region, candidate 6
66. Gm19203 ENSMUSG00000092376 1 0.86 0.860 - - - - - predicted gene, 19203 [Source:MGI Symbol;Acc:MGI:5011388]
67. Myl1 ENSMUSG00000061816 2895 0.854 - - - - 0.854 - myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
68. Neb ENSMUSG00000026950 948 0.847 - - - - 0.847 - nebulin [Source:MGI Symbol;Acc:MGI:97292]
69. Syn3 ENSMUSG00000059602 27 0.83 0.830 - - - - - synapsin III [Source:MGI Symbol;Acc:MGI:1351334]
70. Rsad2 ENSMUSG00000020641 376 0.812 0.812 - - - - - radical S-adenosyl methionine domain containing 2 [Source:MGI Symbol;Acc:MGI:1929628]
71. Chodl ENSMUSG00000022860 172 0.804 - - 0.804 - - - chondrolectin [Source:MGI Symbol;Acc:MGI:2179069]
72. Dmrt2 ENSMUSG00000048138 949 0.803 - 0.803 - - - - doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
73. Fibin ENSMUSG00000074971 907 0.801 - - - - 0.801 - fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
74. Ankrd1 ENSMUSG00000024803 49 0.796 - - 0.796 - - - ankyrin repeat domain 1 (cardiac muscle) [Source:MGI Symbol;Acc:MGI:1097717]
75. Scn3a ENSMUSG00000057182 420 0.793 - - 0.793 - - - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
76. Ttn ENSMUSG00000051747 3015 0.791 - - - - 0.791 - titin [Source:MGI Symbol;Acc:MGI:98864]
77. Nnat ENSMUSG00000067786 17900 0.786 - - 0.786 - - - neuronatin [Source:MGI Symbol;Acc:MGI:104716]
78. Nos2 ENSMUSG00000020826 15 0.784 0.784 - - - - - nitric oxide synthase 2, inducible [Source:MGI Symbol;Acc:MGI:97361]
79. Myl4 ENSMUSG00000061086 819 0.777 - - - - 0.777 - myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
80. Pygm ENSMUSG00000032648, ENSMUSG00000106877 531 0.776 - - - - 0.776 - muscle glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97830]
81. Lhx3 ENSMUSG00000026934 117 0.767 0.767 - - - - - LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
82. Gemin4 ENSMUSG00000049396 11 0.765 0.765 - - - - - gem nuclear organelle associated protein 4 [Source:MGI Symbol;Acc:MGI:2449313]
83. Lct ENSMUSG00000026354 17 0.765 0.765 - - - - - lactase [Source:MGI Symbol;Acc:MGI:104576]
84. Gm12098 ENSMUSG00000082078 4 0.765 0.765 - - - - - predicted gene 12098 [Source:MGI Symbol;Acc:MGI:3651581]
85. Hrc ENSMUSG00000038239 145 0.762 - 0.762 - - - - histidine rich calcium binding protein [Source:MGI Symbol;Acc:MGI:96226]
86. Lrig1 ENSMUSG00000030029 649 0.762 - 0.762 - - - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:MGI Symbol;Acc:MGI:107935]
87. Ntn1 ENSMUSG00000020902 1175 0.762 - 0.762 - - - - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
88. Nsg2 ENSMUSG00000020297 1718 0.762 - - 0.762 - - - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
89. Sp9 ENSMUSG00000068859 60 0.761 0.761 - - - - - trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
90. Nrxn1 ENSMUSG00000024109 197 0.756 - - 0.756 - - - neurexin I [Source:MGI Symbol;Acc:MGI:1096391]
91. Chrna1 ENSMUSG00000027107 89 0.754 - - 0.754 - - - cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) [Source:MGI Symbol;Acc:MGI:87885]
92. Nr4a3 ENSMUSG00000028341 474 0.754 0.754 - - - - - nuclear receptor subfamily 4, group A, member 3 [Source:MGI Symbol;Acc:MGI:1352457]
93. Otub2 ENSMUSG00000021203 157 0.751 - - 0.751 - - - OTU domain, ubiquitin aldehyde binding 2 [Source:MGI Symbol;Acc:MGI:1915399]
94. Tmem163 ENSMUSG00000026347 282 0.751 - - 0.751 - - - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
95. Ablim3 ENSMUSG00000032735 497 0.749 - 0.749 - - - - actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
96. Wnt16 ENSMUSG00000029671 196 0.749 - 0.749 - - - - wingless-type MMTV integration site family, member 16 [Source:MGI Symbol;Acc:MGI:2136018]
97. Scrt2 ENSMUSG00000060257 121 0.749 - - 0.749 - - - scratch family zinc finger 2 [Source:MGI Symbol;Acc:MGI:2139287]
98. Myod1 ENSMUSG00000009471 536 0.746 - - - - 0.746 - myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275]
99. Osr1 ENSMUSG00000048387 855 0.746 - - - - 0.746 - odd-skipped related transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344424]
100. Ttyh1 ENSMUSG00000030428 279 0.743 0.743 - - - - - tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA