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Results for Slc6a4

Gene Name Gene ID Reads Annotation
Slc6a4 ENSMUSG00000020838 67 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 [Source:MGI Symbol;Acc:MGI:96285]







Genes with expression patterns similar to Slc6a4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Slc6a4 ENSMUSG00000020838 67 6 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 [Source:MGI Symbol;Acc:MGI:96285]
2. Tmem27 76 1.767 - - 0.912 - 0.855 - transmembrane protein 27, transcript variant 1
3. Ripk2 ENSMUSG00000041135 299 1.752 - - 0.889 - - 0.863 receptor (TNFRSF)-interacting serine-threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1891456]
4. Gm13648 ENSMUSG00000086549 21 1.752 0.974 - - - - 0.778 predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
5. Vnn1 ENSMUSG00000037440 106 1.725 0.922 - 0.803 - - - vanin 1 [Source:MGI Symbol;Acc:MGI:108395]
6. Lgals2 ENSMUSG00000043501 95 1.639 - - 0.932 - 0.707 - lectin, galactose-binding, soluble 2 [Source:MGI Symbol;Acc:MGI:895068]
7. Oprk1 ENSMUSG00000025905 18 1.598 0.743 - - - 0.855 - opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
8. Adamts3 ENSMUSG00000043635 540 1.495 0.795 - 0.700 - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 [Source:MGI Symbol;Acc:MGI:3045353]
9. Lrriq3 ENSMUSG00000028182 5 0.976 0.976 - - - - - leucine-rich repeats and IQ motif containing 3 [Source:MGI Symbol;Acc:MGI:1921685]
10. Gm4953 ENSMUSG00000061992 4 0.974 0.974 - - - - - predicted pseudogene 4953 [Source:MGI Symbol;Acc:MGI:3647627]
11. Gm5139 ENSMUSG00000093447 4 0.974 0.974 - - - - - predicted gene 5139 [Source:MGI Symbol;Acc:MGI:3779465]
12. 5330413P13Rik ENSMUSG00000086822 7 0.974 0.974 - - - - - RIKEN cDNA 5330413P13 gene [Source:MGI Symbol;Acc:MGI:3041161]
13. Gm17449 Gm17449 4 0.974 0.974 - - - - -
14. Tmem140 ENSMUSG00000057137 10 0.974 0.974 - - - - - transmembrane protein 140 [Source:MGI Symbol;Acc:MGI:1915737]
15. Trim34a ENSMUSG00000056144 39 0.974 0.974 - - - - - tripartite motif-containing 34A [Source:MGI Symbol;Acc:MGI:2137359]
16. Bmp10 ENSMUSG00000030046 4 0.974 0.974 - - - - - bone morphogenetic protein 10 [Source:MGI Symbol;Acc:MGI:1338820]
17. Tmprss6 ENSMUSG00000016942 9 0.974 0.974 - - - - - transmembrane serine protease 6 [Source:MGI Symbol;Acc:MGI:1919003]
18. 1110006G14Rik 1110006G14Rik 29 0.972 0.972 - - - - -
19. Dlec1 ENSMUSG00000038060 11 0.965 0.965 - - - - - deleted in lung and esophageal cancer 1 [Source:MGI Symbol;Acc:MGI:2443671]
20. Lrrc18 ENSMUSG00000041673 29 0.965 0.965 - - - - - leucine rich repeat containing 18 [Source:MGI Symbol;Acc:MGI:1914830]
21. Gm10357 ENSMUSG00000072421 11 0.965 0.965 - - - - - predicted gene 10357 [Source:MGI Symbol;Acc:MGI:3641865]
22. Gm5464 ENSMUSG00000075553 14 0.962 0.962 - - - - - predicted gene 5464 [Source:MGI Symbol;Acc:MGI:3643060]
23. Prg4 ENSMUSG00000006014 30 0.961 0.961 - - - - - proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) [Source:MGI Symbol;Acc:MGI:1891344]
24. Foxl2os ENSMUSG00000097072 12 0.96 0.960 - - - - - forkhead box L2, opposite strand [Source:MGI Symbol;Acc:MGI:3614944]
25. 4930480K23Rik ENSMUSG00000097284 105 0.96 0.960 - - - - - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
26. Mmp28 ENSMUSG00000020682 22 0.955 0.955 - - - - - matrix metallopeptidase 28 (epilysin) [Source:MGI Symbol;Acc:MGI:2153062]
27. Gm19967 ENSMUSG00000093858 65 0.954 - - 0.954 - - - predicted gene, 19967 [Source:MGI Symbol;Acc:MGI:5012152]
28. Tspan8 ENSMUSG00000034127 107 0.953 - - 0.953 - - - tetraspanin 8 [Source:MGI Symbol;Acc:MGI:2384918]
29. Fcho1 ENSMUSG00000070000 81 0.953 - - 0.953 - - - FCH domain only 1 [Source:MGI Symbol;Acc:MGI:1921265]
30. Akr1c12 ENSMUSG00000021211 55 0.951 - - 0.951 - - - aldo-keto reductase family 1, member C12 [Source:MGI Symbol;Acc:MGI:1351661]
31. Gm12521 Gm12521 210 0.949 - - 0.949 - - -
32. Hes7 ENSMUSG00000023781 71 0.948 - - 0.948 - - - hes family bHLH transcription factor 7 [Source:MGI Symbol;Acc:MGI:2135679]
33. Rfx2 ENSMUSG00000024206 298 0.948 - - 0.948 - - - regulatory factor X, 2 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:106583]
34. Isoc2b ENSMUSG00000052605 49 0.947 - - 0.947 - - - isochorismatase domain containing 2b [Source:MGI Symbol;Acc:MGI:1914691]
35. Gpr39 ENSMUSG00000026343 13 0.947 - - 0.947 - - - G protein-coupled receptor 39 [Source:MGI Symbol;Acc:MGI:1918361]
36. Ggta1 ENSMUSG00000035778 203 0.947 - - 0.947 - - - glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
37. Hnf4g ENSMUSG00000017688 13 0.945 - - 0.945 - - - hepatocyte nuclear factor 4, gamma [Source:MGI Symbol;Acc:MGI:1353604]
38. RNF8 RNF8 23 0.945 - - 0.945 - - -
39. Gm11575 ENSMUSG00000081562 23 0.945 - - 0.945 - - - predicted gene 11575 [Source:MGI Symbol;Acc:MGI:3649592]
40. Lgals3bp ENSMUSG00000033880 154 0.944 - - 0.944 - - - lectin, galactoside-binding, soluble, 3 binding protein [Source:MGI Symbol;Acc:MGI:99554]
41. A630014C17Rik ENSMUSG00000086395 10 0.944 - - 0.944 - - - RIKEN cDNA A630014C17 gene [Source:MGI Symbol;Acc:MGI:3026989]
42. Gm12879 ENSMUSG00000081305 31 0.944 - - 0.944 - - - predicted gene 12879 [Source:MGI Symbol;Acc:MGI:3649632]
43. Samd5 ENSMUSG00000060487 59 0.942 - - 0.942 - - - sterile alpha motif domain containing 5 [Source:MGI Symbol;Acc:MGI:2444815]
44. Foxa3 ENSMUSG00000040891 20 0.942 - - 0.942 - - - forkhead box A3 [Source:MGI Symbol;Acc:MGI:1347477]
45. Gm24888 ENSMUSG00000077575 12 0.942 - - 0.942 - - - predicted gene, 24888 [Source:MGI Symbol;Acc:MGI:5454665]
46. Kcnh8 ENSMUSG00000035580 31 0.941 - - 0.941 - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:MGI Symbol;Acc:MGI:2445160]
47. Kcnt2 ENSMUSG00000052726 40 0.941 - - 0.941 - - - potassium channel, subfamily T, member 2 [Source:MGI Symbol;Acc:MGI:3036273]
48. Gm8806 ENSMUSG00000083367 34 0.941 - - 0.941 - - - predicted gene 8806 [Source:MGI Symbol;Acc:MGI:3643511]
49. Pigh ENSMUSG00000021120 33 0.94 - - 0.940 - - - phosphatidylinositol glycan anchor biosynthesis, class H [Source:MGI Symbol;Acc:MGI:99463]
50. 2810430I11Rik ENSMUSG00000085766 22 0.94 - - 0.940 - - - RIKEN cDNA 2810430I11 gene [Source:MGI Symbol;Acc:MGI:3590515]
51. Kcns3 ENSMUSG00000043673 74 0.94 - - 0.940 - - - potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 [Source:MGI Symbol;Acc:MGI:1098804]
52. Nek8 ENSMUSG00000017405 252 0.939 - - 0.939 - - - NIMA (never in mitosis gene a)-related expressed kinase 8 [Source:MGI Symbol;Acc:MGI:1890646]
53. Otor ENSMUSG00000027416 53 0.939 - - 0.939 - - - otoraplin [Source:MGI Symbol;Acc:MGI:1888678]
54. 1700012C14Rik ENSMUSG00000085470 43 0.938 - - 0.938 - - - RIKEN cDNA 1700012C14 gene [Source:MGI Symbol;Acc:MGI:1916587]
55. Lin52 ENSMUSG00000085793 383 0.938 - - 0.938 - - - lin-52 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:3045391]
56. 8030451A03Rik ENSMUSG00000073821 37 0.938 - - 0.938 - - - RIKEN cDNA 8030451A03 gene [Source:MGI Symbol;Acc:MGI:1915353]
57. Pamr1 ENSMUSG00000027188 87 0.937 - - 0.937 - - - peptidase domain containing associated with muscle regeneration 1 [Source:MGI Symbol;Acc:MGI:2445082]
58. Zfp52 ENSMUSG00000051341 38 0.932 0.932 - - - - - zinc finger protein 52 [Source:MGI Symbol;Acc:MGI:99199]
59. Gm20900 ENSMUSG00000078180 76 0.931 - - 0.931 - - - predicted gene, 20900 [Source:MGI Symbol;Acc:MGI:5434256]
60. Hnf4a ENSMUSG00000017950 358 0.93 - - 0.930 - - - hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
61. Ffar4 ENSMUSG00000054200 29 0.93 - - 0.930 - - - free fatty acid receptor 4 [Source:MGI Symbol;Acc:MGI:2147577]
62. AA474408 ENSMUSG00000073867 14 0.928 0.928 - - - - - expressed sequence AA474408 [Source:MGI Symbol;Acc:MGI:3034216]
63. Zfp960 ENSMUSG00000096696 32 0.928 - - 0.928 - - - zinc finger protein 960 [Source:MGI Symbol;Acc:MGI:3052731]
64. Tacr1 ENSMUSG00000030043 17 0.928 - - 0.928 - - - tachykinin receptor 1 [Source:MGI Symbol;Acc:MGI:98475]
65. Gm15538 ENSMUSG00000083579 231 0.926 - - 0.926 - - - predicted gene 15538 [Source:MGI Symbol;Acc:MGI:3782986]
66. Dtx1 ENSMUSG00000029603 48 0.924 - - 0.924 - - - deltex 1, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:1352744]
67. Coro2a ENSMUSG00000028337 208 0.924 - - 0.924 - - - coronin, actin binding protein 2A [Source:MGI Symbol;Acc:MGI:1345966]
68. Gbp7 ENSMUSG00000040253 236 0.923 - - 0.923 - - - guanylate binding protein 7 [Source:MGI Symbol;Acc:MGI:2444421]
69. Rcor3 ENSMUSG00000037395, ENSMUSG00000111452 448 0.922 - - 0.922 - - - REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920]
70. Vrk2 ENSMUSG00000064090 116 0.922 - - 0.922 - - - vaccinia related kinase 2 [Source:MGI Symbol;Acc:MGI:1917172]
71. Tmem8 ENSMUSG00000024180 228 0.922 - - 0.922 - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
72. Trim30a ENSMUSG00000030921 72 0.921 - - 0.921 - - - tripartite motif-containing 30A [Source:MGI Symbol;Acc:MGI:98178]
73. Exoc6 ENSMUSG00000053799 141 0.921 - - 0.921 - - - exocyst complex component 6 [Source:MGI Symbol;Acc:MGI:1351611]
74. Map3k6 ENSMUSG00000028862 50 0.92 - - - - - 0.920 mitogen-activated protein kinase kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1855691]
75. Car5b ENSMUSG00000031373 107 0.919 - - 0.919 - - - carbonic anhydrase 5b, mitochondrial [Source:MGI Symbol;Acc:MGI:1926249]
76. Lpxn ENSMUSG00000024696 26 0.917 - - 0.917 - - - leupaxin [Source:MGI Symbol;Acc:MGI:2147677]
77. Slc40a1 ENSMUSG00000025993 484 0.916 - - 0.916 - - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:MGI Symbol;Acc:MGI:1315204]
78. Ctla2b ENSMUSG00000074874 66 0.916 0.916 - - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
79. Gdap10 ENSMUSG00000096954 378 0.916 - - 0.916 - - - ganglioside-induced differentiation-associated-protein 10 [Source:MGI Symbol;Acc:MGI:1338008]
80. Immp2l ENSMUSG00000056899 263 0.914 - - 0.914 - - - IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2135611]
81. Tbc1d8 ENSMUSG00000003134 507 0.914 - - 0.914 - - - TBC1 domain family, member 8 [Source:MGI Symbol;Acc:MGI:1927225]
82. Gm8623 ENSMUSG00000062458 93 0.914 - - 0.914 - - - predicted gene 8623 [Source:MGI Symbol;Acc:MGI:3644689]
83. Scara5 ENSMUSG00000022032 68 0.914 0.914 - - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
84. Srpx ENSMUSG00000090084 170 0.913 - - 0.913 - - - sushi-repeat-containing protein [Source:MGI Symbol;Acc:MGI:1858306]
85. Fbxo18 ENSMUSG00000058594 1301 0.913 - - 0.913 - - - F-box protein 18 [Source:MGI Symbol;Acc:MGI:1354699]
86. Kcnn1 ENSMUSG00000002908, ENSMUSG00000111706 132 0.911 - - 0.911 - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 [Source:MGI Symbol;Acc:MGI:1933993]
87. Gm17509 ENSMUSG00000091423 13 0.91 0.910 - - - - - predicted gene, 17509 [Source:MGI Symbol;Acc:MGI:4937143]
88. Rhpn2 ENSMUSG00000030494 243 0.91 - - 0.910 - - - rhophilin, Rho GTPase binding protein 2 [Source:MGI Symbol;Acc:MGI:1289234]
89. Ipp ENSMUSG00000028696 221 0.91 - - 0.910 - - - IAP promoted placental gene [Source:MGI Symbol;Acc:MGI:96581]
90. Gm10775 ENSMUSG00000074847 121 0.909 - - - - - 0.909 predicted gene 10775 [Source:MGI Symbol;Acc:MGI:3642324]
91. Lama2 ENSMUSG00000019899 298 0.908 - - 0.908 - - - laminin, alpha 2 [Source:MGI Symbol;Acc:MGI:99912]
92. Tatdn2 ENSMUSG00000056952 357 0.908 - - 0.908 - - - TatD DNase domain containing 2 [Source:MGI Symbol;Acc:MGI:3576210]
93. Il17re ENSMUSG00000043088 116 0.908 0.908 - - - - - interleukin 17 receptor E [Source:MGI Symbol;Acc:MGI:1889371]
94. Actl6a ENSMUSG00000027671 174 0.908 - - 0.908 - - - actin-like 6A [Source:MGI Symbol;Acc:MGI:1861453]
95. St8sia3 ENSMUSG00000056812 268 0.908 - - 0.908 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:MGI Symbol;Acc:MGI:106019]
96. Fam13b ENSMUSG00000036501 75 0.907 - - 0.907 - - - family with sequence similarity 13, member B [Source:MGI Symbol;Acc:MGI:2447834]
97. Dlx1 ENSMUSG00000041911 88 0.904 - - 0.904 - - - distal-less homeobox 1 [Source:MGI Symbol;Acc:MGI:94901]
98. Lurap1l ENSMUSG00000048706 165 0.903 - - 0.903 - - - leucine rich adaptor protein 1-like [Source:MGI Symbol;Acc:MGI:106510]
99. Rbm47 ENSMUSG00000070780 296 0.903 - - 0.903 - - - RNA binding motif protein 47 [Source:MGI Symbol;Acc:MGI:2384294]
100. Wdr25 ENSMUSG00000040877 168 0.899 0.899 - - - - - WD repeat domain 25 [Source:MGI Symbol;Acc:MGI:3045255]

There are 356 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA