Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Skida1

Gene Name Gene ID Reads Annotation
Skida1 ENSMUSG00000054074 1796 SKI/DACH domain containing 1 [Source:MGI Symbol;Acc:MGI:1919918]







Genes with expression patterns similar to Skida1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Skida1 ENSMUSG00000054074 1796 6 1.000 1.000 1.000 1.000 1.000 1.000 SKI/DACH domain containing 1 [Source:MGI Symbol;Acc:MGI:1919918]
2. B3galtl B3galtl 1530 2.35 0.714 - - - 0.837 0.799
3. Acer3 ENSMUSG00000030760 598 1.731 - 0.889 - - 0.842 - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
4. Xpc ENSMUSG00000030094 530 1.721 - 0.912 - - 0.809 - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
5. Pdp2 ENSMUSG00000048371 637 1.718 - 0.862 - - - 0.856 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
6. Rabl6 ENSMUSG00000015087 1555 1.71 - 0.840 - - - 0.870 RAB, member RAS oncogene family-like 6 [Source:MGI Symbol;Acc:MGI:2442633]
7. Rufy2 ENSMUSG00000020070 1150 1.695 - 0.857 - - - 0.838 RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
8. Mageh1 ENSMUSG00000047238 3006 1.68 - 0.843 - - 0.837 - melanoma antigen, family H, 1 [Source:MGI Symbol;Acc:MGI:1922875]
9. Ppm1d ENSMUSG00000020525 1303 1.678 - 0.891 - - 0.787 - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
10. BC026585 1005 1.675 - - - - 0.825 0.850 cDNA sequence BC026585, transcript variant X1
11. Kif13a ENSMUSG00000021375 1229 1.663 - 0.822 - - - 0.841 kinesin family member 13A [Source:MGI Symbol;Acc:MGI:1098264]
12. Mbd1 ENSMUSG00000024561 619 1.658 - - - - 0.810 0.848 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
13. A230046K03Rik 1222 1.649 - 0.882 - - 0.767 - RIKEN cDNA A230046K03 gene, transcript variant X2
14. Gm12088 ENSMUSG00000086707 296 1.632 - 0.894 0.738 - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
15. Tpmt ENSMUSG00000021376 544 1.63 0.720 0.910 - - - - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
16. Kti12 ENSMUSG00000073775 1671 1.622 - 0.811 - - - 0.811 KTI12 homolog, chromatin associated [Source:MGI Symbol;Acc:MGI:1923547]
17. Mcm8 ENSMUSG00000027353 1598 1.618 0.755 - - - - 0.863 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
18. Kcnk1 ENSMUSG00000033998 256 1.613 - 0.903 0.710 - - - potassium channel, subfamily K, member 1 [Source:MGI Symbol;Acc:MGI:109322]
19. Trp53inp2 ENSMUSG00000038375 1466 1.607 0.762 0.845 - - - - transformation related protein 53 inducible nuclear protein 2 [Source:MGI Symbol;Acc:MGI:1915978]
20. Gm10307 ENSMUSG00000101093 159 1.605 - - 0.738 - - 0.867 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
21. Spred1 ENSMUSG00000027351 2590 1.597 - - - - 0.814 0.783 sprouty protein with EVH-1 domain 1, related sequence [Source:MGI Symbol;Acc:MGI:2150016]
22. Gstz1 ENSMUSG00000021033 852 1.591 0.716 0.875 - - - - glutathione transferase zeta 1 (maleylacetoacetate isomerase) [Source:MGI Symbol;Acc:MGI:1341859]
23. Sra1 ENSMUSG00000006050 3267 1.585 - 0.783 - - 0.802 - steroid receptor RNA activator 1 [Source:MGI Symbol;Acc:MGI:1344414]
24. Pla2g3 ENSMUSG00000034579 79 1.583 - - 0.720 - 0.863 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
25. Recql5 ENSMUSG00000020752 591 1.581 - - - - 0.770 0.811 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
26. Gramd1a ENSMUSG00000001248 2162 1.579 - 0.799 - - - 0.780 GRAM domain containing 1A [Source:MGI Symbol;Acc:MGI:105490]
27. Lmbr1 ENSMUSG00000010721 572 1.578 0.729 - - - 0.849 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
28. Acp2 ENSMUSG00000002103 1293 1.577 0.710 - - - - 0.867 acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
29. Sptb ENSMUSG00000021061 824 1.576 - - - - 0.831 0.745 spectrin beta, erythrocytic [Source:MGI Symbol;Acc:MGI:98387]
30. Gm5879 ENSMUSG00000068262 1572 1.575 - 0.801 - - 0.774 - predicted gene 5879 [Source:MGI Symbol;Acc:MGI:3647624]
31. Camta1 ENSMUSG00000014592 3380 1.566 - 0.862 - - - 0.704 calmodulin binding transcription activator 1 [Source:MGI Symbol;Acc:MGI:2140230]
32. Gm23913 Gm23913 84 1.565 - - 0.720 - 0.845 -
33. Slc25a13 ENSMUSG00000015112 2038 1.563 - - - - 0.783 0.780 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 [Source:MGI Symbol;Acc:MGI:1354721]
34. 2810006K23Rik ENSMUSG00000047635 1607 1.547 0.718 0.829 - - - - RIKEN cDNA 2810006K23 gene [Source:MGI Symbol;Acc:MGI:1919900]
35. Sgol1 1886 1.545 - - - - 0.837 0.708 shugoshin-like 1 (S. pombe), transcript variant X2
36. Cox10 ENSMUSG00000042148 1382 1.535 - - - - 0.733 0.802 heme A:farnesyltransferase cytochrome c oxidase assembly factor 10 [Source:MGI Symbol;Acc:MGI:1917633]
37. Smg8 ENSMUSG00000020495 2072 1.532 - - - - 0.711 0.821 smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:1921383]
38. 3110082I17Rik ENSMUSG00000053553 775 1.527 0.711 - - - - 0.816 RIKEN cDNA 3110082I17 gene [Source:MGI Symbol;Acc:MGI:1920462]
39. Rab1b ENSMUSG00000024870 4174 1.525 - - - - 0.713 0.812 RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]
40. Atg13 ENSMUSG00000027244 1178 1.522 0.719 - - - 0.803 - autophagy related 13 [Source:MGI Symbol;Acc:MGI:1196429]
41. Atp6v0b ENSMUSG00000033379 1314 1.522 - - - - 0.795 0.727 ATPase, H+ transporting, lysosomal V0 subunit B [Source:MGI Symbol;Acc:MGI:1890510]
42. Rhbdf1 ENSMUSG00000020282 1113 1.522 - - - - 0.709 0.813 rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
43. Gm4117 ENSMUSG00000089940 1066 1.521 0.714 - - - 0.807 - predicted gene 4117 [Source:MGI Symbol;Acc:MGI:3782293]
44. Mex3c ENSMUSG00000037253 2299 1.519 0.765 - - - - 0.754 mex3 RNA binding family member C [Source:MGI Symbol;Acc:MGI:2652843]
45. Ndufb6 ENSMUSG00000071014 2988 1.513 - 0.717 - - - 0.796 NADH:ubiquinone oxidoreductase subunit B6 [Source:MGI Symbol;Acc:MGI:2684983]
46. Snx5 ENSMUSG00000027423 3464 1.445 0.709 - - - - 0.736 sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
47. Sipa1 ENSMUSG00000056917 2263 1.427 0.724 - - - - 0.703 signal-induced proliferation associated gene 1 [Source:MGI Symbol;Acc:MGI:107576]
48. Ndfip1 ENSMUSG00000024425 231 0.924 - 0.924 - - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
49. 4933404O12Rik ENSMUSG00000097908 302 0.923 - 0.923 - - - - RIKEN cDNA 4933404O12 gene [Source:MGI Symbol;Acc:MGI:1914002]
50. Zfp819 ENSMUSG00000055102 59 0.921 - 0.921 - - - - zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]
51. Aspa ENSMUSG00000020774 50 0.921 - 0.921 - - - - aspartoacylase [Source:MGI Symbol;Acc:MGI:87914]
52. Rnpc3 ENSMUSG00000027981 855 0.921 - 0.921 - - - - RNA-binding region (RNP1, RRM) containing 3 [Source:MGI Symbol;Acc:MGI:1914475]
53. Lox ENSMUSG00000024529 219 0.921 - 0.921 - - - - lysyl oxidase [Source:MGI Symbol;Acc:MGI:96817]
54. Anks1 ENSMUSG00000024219 2498 0.921 - 0.921 - - - - ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
55. 3110099E03Rik ENSMUSG00000085582 57 0.92 - 0.920 - - - - RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
56. Fam151b ENSMUSG00000034334 2211 0.92 - 0.920 - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
57. Irs1 ENSMUSG00000055980 207 0.92 - 0.920 - - - - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
58. Efemp2 ENSMUSG00000024909 777 0.92 - 0.920 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
59. Arnt ENSMUSG00000015522 777 0.919 - 0.919 - - - - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
60. St3gal4 ENSMUSG00000032038 227 0.919 - 0.919 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:1316743]
61. Aarsd1 ENSMUSG00000075528 70 0.918 - 0.918 - - - - alanyl-tRNA synthetase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916934]
62. Ap3b1 ENSMUSG00000021686 3044 0.918 - 0.918 - - - - adaptor-related protein complex 3, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1333879]
63. Gm3695 ENSMUSG00000067224 120 0.918 - 0.918 - - - - predicted gene 3695 [Source:MGI Symbol;Acc:MGI:3781871]
64. Gm12840 ENSMUSG00000086320 98 0.918 - 0.918 - - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
65. AA465934 ENSMUSG00000093483 144 0.918 - 0.918 - - - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
66. Stambpl1 ENSMUSG00000024776 130 0.917 - 0.917 - - - - STAM binding protein like 1 [Source:MGI Symbol;Acc:MGI:1923880]
67. Slc25a32 ENSMUSG00000022299, ENSMUSG00000107007 146 0.917 - 0.917 - - - - solute carrier family 25, member 32 [Source:MGI Symbol;Acc:MGI:1917156]
68. 2310014L17Rik 2310014L17Rik 153 0.917 - 0.917 - - - -
69. Gskip ENSMUSG00000044715 985 0.916 - 0.916 - - - - GSK3B interacting protein [Source:MGI Symbol;Acc:MGI:1914037]
70. Cmah ENSMUSG00000016756 641 0.916 - 0.916 - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:MGI Symbol;Acc:MGI:103227]
71. Hpse ENSMUSG00000035273 197 0.916 - 0.916 - - - - heparanase [Source:MGI Symbol;Acc:MGI:1343124]
72. Rhod ENSMUSG00000041845 571 0.916 - 0.916 - - - - ras homolog family member D [Source:MGI Symbol;Acc:MGI:108446]
73. Atp6v0a2 ENSMUSG00000038023 268 0.916 - 0.916 - - - - ATPase, H+ transporting, lysosomal V0 subunit A2 [Source:MGI Symbol;Acc:MGI:104855]
74. Mlx ENSMUSG00000017801 376 0.915 - 0.915 - - - - MAX-like protein X [Source:MGI Symbol;Acc:MGI:108398]
75. Pax5 ENSMUSG00000014030 74 0.915 - 0.915 - - - - paired box 5 [Source:MGI Symbol;Acc:MGI:97489]
76. Zbtb41 ENSMUSG00000033964 787 0.914 - 0.914 - - - - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
77. Gm4258 ENSMUSG00000098243 99 0.913 - 0.913 - - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
78. Atrip ENSMUSG00000025646 321 0.913 - 0.913 - - - - ATR interacting protein [Source:MGI Symbol;Acc:MGI:1925349]
79. Gm22662 ENSMUSG00000093031 187 0.913 - 0.913 - - - - predicted gene, 22662 [Source:MGI Symbol;Acc:MGI:5452439]
80. Gm14843 ENSMUSG00000083897 219 0.912 - 0.912 - - - - predicted gene 14843 [Source:MGI Symbol;Acc:MGI:3802062]
81. Sh3yl1 ENSMUSG00000020669 209 0.912 - 0.912 - - - - Sh3 domain YSC-like 1 [Source:MGI Symbol;Acc:MGI:1346118]
82. Spon2 ENSMUSG00000037379 204 0.911 - 0.911 - - - - spondin 2, extracellular matrix protein [Source:MGI Symbol;Acc:MGI:1923724]
83. Malt1 ENSMUSG00000032688 329 0.911 - 0.911 - - - - MALT1 paracaspase [Source:MGI Symbol;Acc:MGI:2445027]
84. 2310047M10Rik 2310047M10Rik 249 0.909 - 0.909 - - - -
85. Pdcd2 ENSMUSG00000014771 871 0.909 - 0.909 - - - - programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
86. Zfp428 ENSMUSG00000064264 966 0.908 - 0.908 - - - - zinc finger protein 428 [Source:MGI Symbol;Acc:MGI:1916463]
87. Nudt11 ENSMUSG00000073295 757 0.908 - 0.908 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
88. Ddx41 ENSMUSG00000021494 788 0.908 - 0.908 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]
89. Rgl1 ENSMUSG00000026482 938 0.908 - 0.908 - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
90. Zfp36 ENSMUSG00000044786 157 0.908 - 0.908 - - - - zinc finger protein 36 [Source:MGI Symbol;Acc:MGI:99180]
91. Tmem203 ENSMUSG00000078201 356 0.907 - 0.907 - - - - transmembrane protein 203 [Source:MGI Symbol;Acc:MGI:2443597]
92. Pomk ENSMUSG00000037251 373 0.907 - 0.907 - - - - protein-O-mannose kinase [Source:MGI Symbol;Acc:MGI:1921903]
93. Rnf19a ENSMUSG00000022280 802 0.905 - 0.905 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
94. Nid2 ENSMUSG00000021806 452 0.905 - 0.905 - - - - nidogen 2 [Source:MGI Symbol;Acc:MGI:1298229]
95. B4galt7 ENSMUSG00000021504 602 0.905 - 0.905 - - - - xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:MGI Symbol;Acc:MGI:2384987]
96. Bola3 ENSMUSG00000045160 1800 0.905 - 0.905 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
97. Tbc1d9 ENSMUSG00000031709 688 0.905 - 0.905 - - - - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
98. Ankrd29 ENSMUSG00000057766 352 0.904 - 0.904 - - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
99. Nsun5 ENSMUSG00000000916 534 0.903 - 0.903 - - - - NOL1/NOP2/Sun domain family, member 5 [Source:MGI Symbol;Acc:MGI:2140844]
100. Nfatc2ip ENSMUSG00000030722 920 0.903 - 0.903 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]

There are 1066 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA