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Results for Ska3

Gene Name Gene ID Reads Annotation
Ska3 ENSMUSG00000021965 1467 spindle and kinetochore associated complex subunit 3 [Source:MGI Symbol;Acc:MGI:3041235]







Genes with expression patterns similar to Ska3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ska3 ENSMUSG00000021965 1467 6 1.000 1.000 1.000 1.000 1.000 1.000 spindle and kinetochore associated complex subunit 3 [Source:MGI Symbol;Acc:MGI:3041235]
2. Ate1 ENSMUSG00000030850 1007 1.508 - 0.775 0.733 - - - arginyltransferase 1 [Source:MGI Symbol;Acc:MGI:1333870]
3. Gm13793 ENSMUSG00000087069 2307 0.951 - 0.951 - - - - predicted gene 13793 [Source:MGI Symbol;Acc:MGI:3652243]
4. Myl9 ENSMUSG00000067818 2365 0.942 - 0.942 - - - - myosin, light polypeptide 9, regulatory [Source:MGI Symbol;Acc:MGI:2138915]
5. Tmem248 ENSMUSG00000053094 2906 0.939 - 0.939 - - - - transmembrane protein 248 [Source:MGI Symbol;Acc:MGI:1918917]
6. Gm13075 ENSMUSG00000086061 1783 0.923 - 0.923 - - - - predicted gene 13075 [Source:MGI Symbol;Acc:MGI:3651958]
7. Dzip3 ENSMUSG00000064061 2677 0.918 - 0.918 - - - - DAZ interacting protein 3, zinc finger [Source:MGI Symbol;Acc:MGI:1917433]
8. Tgfbr3 ENSMUSG00000029287 1818 0.91 - 0.910 - - - - transforming growth factor, beta receptor III [Source:MGI Symbol;Acc:MGI:104637]
9. Taf1d ENSMUSG00000031939 2288 0.91 - 0.910 - - - - TATA-box binding protein associated factor, RNA polymerase I, D [Source:MGI Symbol;Acc:MGI:1922566]
10. Prpf4 ENSMUSG00000066148 2785 0.896 - 0.896 - - - - pre-mRNA processing factor 4 [Source:MGI Symbol;Acc:MGI:1917302]
11. Ncstn ENSMUSG00000003458 2776 0.889 - 0.889 - - - - nicastrin [Source:MGI Symbol;Acc:MGI:1891700]
12. Snrpg ENSMUSG00000057278 5065 0.887 - 0.887 - - - - small nuclear ribonucleoprotein polypeptide G [Source:MGI Symbol;Acc:MGI:1915261]
13. Magt1 ENSMUSG00000031232 5858 0.885 - 0.885 - - - - magnesium transporter 1 [Source:MGI Symbol;Acc:MGI:1914325]
14. Zmat2 ENSMUSG00000001383 6961 0.881 - 0.881 - - - - zinc finger, matrin type 2 [Source:MGI Symbol;Acc:MGI:1913742]
15. Gm10169 ENSMUSG00000083669 1498 0.876 - 0.876 - - - - predicted pseudogene 10169 [Source:MGI Symbol;Acc:MGI:3642393]
16. Hps3 ENSMUSG00000027615 596 0.875 - 0.875 - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
17. Cdc42ep5 ENSMUSG00000063838 592 0.87 - 0.870 - - - - CDC42 effector protein (Rho GTPase binding) 5 [Source:MGI Symbol;Acc:MGI:1929745]
18. Cyp2j6 ENSMUSG00000052914 325 0.868 - 0.868 - - - - cytochrome P450, family 2, subfamily j, polypeptide 6 [Source:MGI Symbol;Acc:MGI:1270148]
19. Zfp456 ENSMUSG00000078995 125 0.867 - 0.867 - - - - zinc finger protein 456 [Source:MGI Symbol;Acc:MGI:3040694]
20. Gm13342 ENSMUSG00000082516 112 0.867 - 0.867 - - - - predicted gene 13342 [Source:MGI Symbol;Acc:MGI:3650441]
21. Rgs18 ENSMUSG00000026357 156 0.867 - 0.867 - - - - regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
22. Hiatl1 Hiatl1 766 0.866 - 0.866 - - - -
23. Tmem40 ENSMUSG00000059900 110 0.866 - 0.866 - - - - transmembrane protein 40 [Source:MGI Symbol;Acc:MGI:2137870]
24. Thbs1 ENSMUSG00000040152 1713 0.866 - 0.866 - - - - thrombospondin 1 [Source:MGI Symbol;Acc:MGI:98737]
25. Rad9b ENSMUSG00000038569 151 0.866 - 0.866 - - - - RAD9 checkpoint clamp component B [Source:MGI Symbol;Acc:MGI:2385231]
26. Nxt2 ENSMUSG00000042271 400 0.866 - 0.866 - - - - nuclear transport factor 2-like export factor 2 [Source:MGI Symbol;Acc:MGI:2147914]
27. Coch ENSMUSG00000020953 154 0.866 - 0.866 - - - - cochlin [Source:MGI Symbol;Acc:MGI:1278313]
28. H2-Q4 ENSMUSG00000035929 157 0.866 - 0.866 - - - - histocompatibility 2, Q region locus 4 [Source:MGI Symbol;Acc:MGI:95933]
29. 3830406C13Rik ENSMUSG00000033111 586 0.865 - 0.865 - - - - RIKEN cDNA 3830406C13 gene [Source:MGI Symbol;Acc:MGI:1917937]
30. Gm26764 ENSMUSG00000097667 599 0.865 - 0.865 - - - - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
31. Srd5a3 ENSMUSG00000029233 1029 0.865 - 0.865 - - - - steroid 5 alpha-reductase 3 [Source:MGI Symbol;Acc:MGI:1930252]
32. Sema4g ENSMUSG00000025207 494 0.865 - 0.865 - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G [Source:MGI Symbol;Acc:MGI:1347047]
33. Trim12a ENSMUSG00000066258 403 0.864 - 0.864 - - - - tripartite motif-containing 12A [Source:MGI Symbol;Acc:MGI:1923931]
34. Gchfr ENSMUSG00000046814 266 0.864 - 0.864 - - - - GTP cyclohydrolase I feedback regulator [Source:MGI Symbol;Acc:MGI:2443977]
35. Zfp937 ENSMUSG00000060336 300 0.864 - 0.864 - - - - zinc finger protein 937 [Source:MGI Symbol;Acc:MGI:3644476]
36. Haus1 ENSMUSG00000041840, ENSMUSG00000115884 877 0.863 - 0.863 - - - - HAUS augmin-like complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2385076]
37. Vav3 ENSMUSG00000033721 527 0.863 - 0.863 - - - - vav 3 oncogene [Source:MGI Symbol;Acc:MGI:1888518]
38. Gnb1l ENSMUSG00000000884 358 0.862 - 0.862 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1-like [Source:MGI Symbol;Acc:MGI:1338057]
39. Inpp4a ENSMUSG00000026113 738 0.862 - 0.862 - - - - inositol polyphosphate-4-phosphatase, type I [Source:MGI Symbol;Acc:MGI:1931123]
40. Cradd ENSMUSG00000045867 347 0.862 - 0.862 - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
41. Gm24056 ENSMUSG00000089242 346 0.862 - 0.862 - - - - predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
42. Mtfp1 ENSMUSG00000004748 496 0.862 - 0.862 - - - - mitochondrial fission process 1 [Source:MGI Symbol;Acc:MGI:1916686]
43. Rnf31 ENSMUSG00000047098 530 0.862 - 0.862 - - - - ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
44. Gm26809 ENSMUSG00000097815 449 0.861 - 0.861 - - - - predicted gene, 26809 [Source:MGI Symbol;Acc:MGI:5477303]
45. Trp53inp1 ENSMUSG00000028211 686 0.861 - 0.861 - - - - transformation related protein 53 inducible nuclear protein 1 [Source:MGI Symbol;Acc:MGI:1926609]
46. Rpl35a ENSMUSG00000060636 411 0.861 - 0.861 - - - - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
47. Vmac ENSMUSG00000054723 731 0.861 - 0.861 - - - - vimentin-type intermediate filament associated coiled-coil protein [Source:MGI Symbol;Acc:MGI:2146912]
48. Gpc4 ENSMUSG00000031119 424 0.861 - 0.861 - - - - glypican 4 [Source:MGI Symbol;Acc:MGI:104902]
49. Card10 ENSMUSG00000033170 832 0.861 - 0.861 - - - - caspase recruitment domain family, member 10 [Source:MGI Symbol;Acc:MGI:2146012]
50. Ptpru ENSMUSG00000028909 644 0.861 - 0.861 - - - - protein tyrosine phosphatase, receptor type, U [Source:MGI Symbol;Acc:MGI:1321151]
51. Cnst ENSMUSG00000038949 727 0.86 - 0.860 - - - - consortin, connexin sorting protein [Source:MGI Symbol;Acc:MGI:2445141]
52. Golga3 ENSMUSG00000029502 800 0.86 - 0.860 - - - - golgi autoantigen, golgin subfamily a, 3 [Source:MGI Symbol;Acc:MGI:96958]
53. Espn ENSMUSG00000028943 238 0.86 - 0.860 - - - - espin [Source:MGI Symbol;Acc:MGI:1861630]
54. Sirt3 ENSMUSG00000025486 327 0.859 - 0.859 - - - - sirtuin 3 [Source:MGI Symbol;Acc:MGI:1927665]
55. Cyb5r1 ENSMUSG00000026456 988 0.859 - 0.859 - - - - cytochrome b5 reductase 1 [Source:MGI Symbol;Acc:MGI:1919267]
56. Gm16378 ENSMUSG00000095762 683 0.859 - 0.859 - - - - predicted gene 16378 [Source:MGI Symbol;Acc:MGI:3646886]
57. Prkaa1 ENSMUSG00000050697 591 0.859 - 0.859 - - - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
58. 1700093K21Rik ENSMUSG00000020286 497 0.859 - 0.859 - - - - RIKEN cDNA 1700093K21 gene [Source:MGI Symbol;Acc:MGI:1914608]
59. Peo1 667 0.859 - 0.859 - - - - progressive external ophthalmoplegia 1 (human), transcript variant X1
60. Tfip11 ENSMUSG00000029345 399 0.859 - 0.859 - - - - tuftelin interacting protein 11 [Source:MGI Symbol;Acc:MGI:1930075]
61. Zc3h7a ENSMUSG00000037965 1775 0.858 - 0.858 - - - - zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
62. Wipi1 ENSMUSG00000041895 3789 0.858 - 0.858 - - - - WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
63. Ranbp6 ENSMUSG00000074909 552 0.858 - 0.858 - - - - RAN binding protein 6 [Source:MGI Symbol;Acc:MGI:2683212]
64. Psma6 ENSMUSG00000021024 3072 0.858 - 0.858 - - - - proteasome (prosome, macropain) subunit, alpha type 6 [Source:MGI Symbol;Acc:MGI:1347006]
65. Scpep1 ENSMUSG00000000278 1675 0.858 - 0.858 - - - - serine carboxypeptidase 1 [Source:MGI Symbol;Acc:MGI:1921867]
66. Acsf3 ENSMUSG00000015016 692 0.857 - 0.857 - - - - acyl-CoA synthetase family member 3 [Source:MGI Symbol;Acc:MGI:2182591]
67. Ddx28 ENSMUSG00000045538 608 0.857 - 0.857 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:MGI Symbol;Acc:MGI:1919236]
68. Txndc15 ENSMUSG00000021497 1081 0.857 - 0.857 - - - - thioredoxin domain containing 15 [Source:MGI Symbol;Acc:MGI:1916922]
69. Endod1 ENSMUSG00000037419 556 0.856 - 0.856 - - - - endonuclease domain containing 1 [Source:MGI Symbol;Acc:MGI:1919196]
70. Gltscr1l 626 0.856 - 0.856 - - - - GLTSCR1-like, transcript variant X8
71. Hibch ENSMUSG00000041426 755 0.855 - 0.855 - - - - 3-hydroxyisobutyryl-Coenzyme A hydrolase [Source:MGI Symbol;Acc:MGI:1923792]
72. Rassf3 ENSMUSG00000025795 880 0.855 - 0.855 - - - - Ras association (RalGDS/AF-6) domain family member 3 [Source:MGI Symbol;Acc:MGI:2179722]
73. Mccc1 ENSMUSG00000027709 688 0.855 - 0.855 - - - - methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) [Source:MGI Symbol;Acc:MGI:1919289]
74. Pde4d ENSMUSG00000021699 821 0.855 - 0.855 - - - - phosphodiesterase 4D, cAMP specific [Source:MGI Symbol;Acc:MGI:99555]
75. Gemin2 ENSMUSG00000060121 858 0.854 - 0.854 - - - - gem nuclear organelle associated protein 2 [Source:MGI Symbol;Acc:MGI:1913853]
76. Ccnd3 ENSMUSG00000034165 817 0.854 - 0.854 - - - - cyclin D3 [Source:MGI Symbol;Acc:MGI:88315]
77. Mdfic ENSMUSG00000041390 812 0.854 - 0.854 - - - - MyoD family inhibitor domain containing [Source:MGI Symbol;Acc:MGI:104611]
78. Gpaa1 ENSMUSG00000022561 4947 0.854 - 0.854 - - - - GPI anchor attachment protein 1 [Source:MGI Symbol;Acc:MGI:1202392]
79. Rpl27a ENSMUSG00000046364 2278 0.853 - 0.853 - - - - ribosomal protein L27A [Source:MGI Symbol;Acc:MGI:1347076]
80. 1110001A16Rik 1110001A16Rik 806 0.853 - 0.853 - - - -
81. Creb3l1 ENSMUSG00000027230 1172 0.853 - 0.853 - - - - cAMP responsive element binding protein 3-like 1 [Source:MGI Symbol;Acc:MGI:1347062]
82. Efnb1 ENSMUSG00000031217 2777 0.853 - 0.853 - - - - ephrin B1 [Source:MGI Symbol;Acc:MGI:102708]
83. Slc20a2 ENSMUSG00000037656 778 0.852 - 0.852 - - - - solute carrier family 20, member 2 [Source:MGI Symbol;Acc:MGI:97851]
84. Six1 ENSMUSG00000051367 745 0.851 - 0.851 - - - - sine oculis-related homeobox 1 [Source:MGI Symbol;Acc:MGI:102780]
85. BC030867 ENSMUSG00000034773 1105 0.851 - 0.851 - - - - cDNA sequence BC030867 [Source:MGI Symbol;Acc:MGI:2387601]
86. Ap2b1 ENSMUSG00000035152 2023 0.849 - 0.849 - - - - adaptor-related protein complex 2, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1919020]
87. Dnm2 ENSMUSG00000033335 1247 0.848 - 0.848 - - - - dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
88. Tpgs1 ENSMUSG00000020308 948 0.848 - 0.848 - - - - tubulin polyglutamylase complex subunit 1 [Source:MGI Symbol;Acc:MGI:106618]
89. Kdm3b ENSMUSG00000038773 1607 0.847 - 0.847 - - - - KDM3B lysine (K)-specific demethylase 3B [Source:MGI Symbol;Acc:MGI:1923356]
90. Pole2 ENSMUSG00000020974 1305 0.846 - 0.846 - - - - polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:MGI Symbol;Acc:MGI:1197514]
91. Mcrs1 ENSMUSG00000037570 4621 0.846 - 0.846 - - - - microspherule protein 1 [Source:MGI Symbol;Acc:MGI:1858420]
92. Rarg ENSMUSG00000001288 1281 0.846 - 0.846 - - - - retinoic acid receptor, gamma [Source:MGI Symbol;Acc:MGI:97858]
93. Med18 ENSMUSG00000066042 841 0.845 - 0.845 - - - - mediator complex subunit 18 [Source:MGI Symbol;Acc:MGI:1914469]
94. Sptlc2 ENSMUSG00000021036 1431 0.844 - 0.844 - - - - serine palmitoyltransferase, long chain base subunit 2 [Source:MGI Symbol;Acc:MGI:108074]
95. Msantd3 ENSMUSG00000039693 1503 0.843 - 0.843 - - - - Myb/SANT-like DNA-binding domain containing 3 [Source:MGI Symbol;Acc:MGI:1913915]
96. Lrrcc1 ENSMUSG00000027550 1623 0.842 - 0.842 - - - - leucine rich repeat and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:1918960]
97. Rnaseh2a ENSMUSG00000052926 1911 0.842 - 0.842 - - - - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
98. Cdh2 ENSMUSG00000024304 2594 0.841 - 0.841 - - - - cadherin 2 [Source:MGI Symbol;Acc:MGI:88355]
99. Ssx2ip ENSMUSG00000036825 1609 0.841 - 0.841 - - - - synovial sarcoma, X 2 interacting protein [Source:MGI Symbol;Acc:MGI:2139150]
100. Snrpd3 ENSMUSG00000020180 2205 0.84 - 0.840 - - - - small nuclear ribonucleoprotein D3 [Source:MGI Symbol;Acc:MGI:1914582]

There are 157 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA