Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sigirr

Gene Name Gene ID Reads Annotation
Sigirr ENSMUSG00000025494 35 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:MGI Symbol;Acc:MGI:1344402]







Genes with expression patterns similar to Sigirr

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sigirr ENSMUSG00000025494 35 6 1.000 1.000 1.000 1.000 1.000 1.000 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:MGI Symbol;Acc:MGI:1344402]
2. 5830472F04Rik 5830472F04Rik 31 1.851 - - - - 0.917 0.934
3. Dock2 ENSMUSG00000020143 77 1.605 - - - - 0.895 0.710 dedicator of cyto-kinesis 2 [Source:MGI Symbol;Acc:MGI:2149010]
4. 4732414G09Rik ENSMUSG00000086943 8 0.961 - - - - 0.961 - RIKEN cDNA 4732414G09 gene [Source:MGI Symbol;Acc:MGI:3045381]
5. Hist2h2ab ENSMUSG00000063689 12 0.959 - - - - - 0.959 histone cluster 2, H2ab [Source:MGI Symbol;Acc:MGI:2448314]
6. Rpl23a ENSMUSG00000058546 15 0.958 - - - - 0.958 - ribosomal protein L23A [Source:MGI Symbol;Acc:MGI:3040672]
7. 4930458D05Rik ENSMUSG00000087611 9 0.953 - - - - 0.953 - RIKEN cDNA 4930458D05 gene [Source:MGI Symbol;Acc:MGI:1923052]
8. Pcdhb16 ENSMUSG00000047910 27 0.948 - - - - 0.948 - protocadherin beta 16 [Source:MGI Symbol;Acc:MGI:2136752]
9. Bglap ENSMUSG00000074483 8 0.947 - - - - 0.947 - bone gamma carboxyglutamate protein [Source:MGI Symbol;Acc:MGI:88156]
10. Sidt1 ENSMUSG00000022696 8 0.946 - - - - 0.946 - SID1 transmembrane family, member 1 [Source:MGI Symbol;Acc:MGI:2443155]
11. Arhgap15 ENSMUSG00000049744 40 0.944 - - - - 0.944 - Rho GTPase activating protein 15 [Source:MGI Symbol;Acc:MGI:1923367]
12. Cebpa ENSMUSG00000034957 21 0.943 - - - - - 0.943 CCAAT/enhancer binding protein (C/EBP), alpha [Source:MGI Symbol;Acc:MGI:99480]
13. Lct ENSMUSG00000026354 17 0.941 - - - - 0.941 - lactase [Source:MGI Symbol;Acc:MGI:104576]
14. Gm14253 ENSMUSG00000082321 37 0.941 - - - - 0.941 - predicted gene 14253 [Source:MGI Symbol;Acc:MGI:3650994]
15. Gm3500 ENSMUSG00000096003 8 0.939 - - - - 0.939 - predicted gene 3500 [Source:MGI Symbol;Acc:MGI:3781677]
16. Snora20 ENSMUSG00000064637 25 0.939 - - - - 0.939 - small nucleolar RNA, H/ACA box 20 [Source:MGI Symbol;Acc:MGI:3819492]
17. Gpr179 ENSMUSG00000070337 20 0.938 - - - - 0.938 - G protein-coupled receptor 179 [Source:MGI Symbol;Acc:MGI:2443409]
18. Gm25896 ENSMUSG00000065647 9 0.936 - - - - 0.936 - predicted gene, 25896 [Source:MGI Symbol;Acc:MGI:5455673]
19. Pcdhb18 ENSMUSG00000048347 44 0.936 - - - - 0.936 - protocadherin beta 18 [Source:MGI Symbol;Acc:MGI:2136756]
20. Nbeal2 ENSMUSG00000056724 47 0.935 - - - - 0.935 - neurobeachin-like 2 [Source:MGI Symbol;Acc:MGI:2448554]
21. Omd ENSMUSG00000048368 9 0.934 - - - - 0.934 - osteomodulin [Source:MGI Symbol;Acc:MGI:1350918]
22. Gm22701 ENSMUSG00000093112 4 0.934 - - - - - 0.934 predicted gene, 22701 [Source:MGI Symbol;Acc:MGI:5452478]
23. Gm26129 ENSMUSG00000064653 10 0.934 - - - - - 0.934 predicted gene, 26129 [Source:MGI Symbol;Acc:MGI:5455906]
24. Gm23300 ENSMUSG00000064646 9 0.934 - - - - - 0.934 predicted gene, 23300 [Source:MGI Symbol;Acc:MGI:5453077]
25. Clic5 ENSMUSG00000023959 20 0.934 - - - - - 0.934 chloride intracellular channel 5 [Source:MGI Symbol;Acc:MGI:1917912]
26. Nccrp1 ENSMUSG00000047586 10 0.934 - - - - - 0.934 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2685009]
27. Rpl21-ps4 ENSMUSG00000072714 15 0.934 - - - - 0.934 - ribosomal protein L21, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3646825]
28. Gm23104 ENSMUSG00000065656 6 0.934 - - - - - 0.934 predicted gene, 23104 [Source:MGI Symbol;Acc:MGI:5452881]
29. Zscan2 ENSMUSG00000038797 12 0.934 - - - - - 0.934 zinc finger and SCAN domain containing 2 [Source:MGI Symbol;Acc:MGI:99176]
30. mmu-mir-7079 mmu-mir-7079 40 0.931 - - - - - 0.931
31. Gm12607 ENSMUSG00000083989 11 0.928 - - - - 0.928 - predicted gene 12607 [Source:MGI Symbol;Acc:MGI:3649224]
32. Faim3 Faim3 16 0.927 - - - - 0.927 -
33. Gm6277 ENSMUSG00000097440 14 0.925 - - - - 0.925 - predicted gene 6277 [Source:MGI Symbol;Acc:MGI:3779583]
34. Gm10735 ENSMUSG00000074650 18 0.924 - - - - 0.924 - predicted gene 10735 [Source:MGI Symbol;Acc:MGI:3642476]
35. Gm15710 ENSMUSG00000084111 36 0.924 - - - - 0.924 - predicted gene 15710 [Source:MGI Symbol;Acc:MGI:3783151]
36. 9230113P08Rik ENSMUSG00000078934 19 0.923 - - - - - 0.923 RIKEN cDNA 9230113P08 gene [Source:MGI Symbol;Acc:MGI:1925158]
37. Mospd4 ENSMUSG00000046487 5 0.923 - - - - - 0.923 motile sperm domain containing 4 [Source:MGI Symbol;Acc:MGI:1919326]
38. Etohi1 Etohi1 19 0.922 - - - - - 0.922
39. Mkln1os ENSMUSG00000086212 12 0.92 - - - - 0.920 - muskelin 1, intracellular mediator containing kelch motifs, opposite strand [Source:MGI Symbol;Acc:MGI:3651306]
40. Gm26818 ENSMUSG00000097037, ENSMUSG00000106977 56 0.919 - - - - 0.919 - predicted gene, 26818 [Source:MGI Symbol;Acc:MGI:5477312]
41. Mettl24 ENSMUSG00000045555 62 0.915 - - - - - 0.915 methyltransferase like 24 [Source:MGI Symbol;Acc:MGI:3045338]
42. Gm13248 38 0.913 - - - - - 0.913 predicted gene 13248
43. Ltc4s ENSMUSG00000020377 18 0.912 - - - - - 0.912 leukotriene C4 synthase [Source:MGI Symbol;Acc:MGI:107498]
44. Eps8l2 ENSMUSG00000025504 185 0.909 - - - - 0.909 - EPS8-like 2 [Source:MGI Symbol;Acc:MGI:2138828]
45. Vsnl1 ENSMUSG00000054459 52 0.909 - - - - - 0.909 visinin-like 1 [Source:MGI Symbol;Acc:MGI:1349453]
46. 2610027K06Rik ENSMUSG00000087013 36 0.909 - - - - - 0.909 RIKEN cDNA 2610027K06 gene [Source:MGI Symbol;Acc:MGI:1917159]
47. Cyp4f41-ps ENSMUSG00000024295 25 0.908 - - - - 0.908 - cytochrome P450, family 4, subfamily f, polypeptide 41 pseudogene [Source:MGI Symbol;Acc:MGI:1925125]
48. Tulp1 ENSMUSG00000037446 33 0.906 - - - - 0.906 - tubby like protein 1 [Source:MGI Symbol;Acc:MGI:109571]
49. Gm26620 ENSMUSG00000096968 24 0.902 - - - - - 0.902 predicted gene, 26620 [Source:MGI Symbol;Acc:MGI:5477114]
50. Lax1 ENSMUSG00000051998 27 0.902 - - - - 0.902 - lymphocyte transmembrane adaptor 1 [Source:MGI Symbol;Acc:MGI:2443362]
51. Tnfsf9 ENSMUSG00000035678 24 0.901 - - - - - 0.901 tumor necrosis factor (ligand) superfamily, member 9 [Source:MGI Symbol;Acc:MGI:1101058]
52. Arhgef16 ENSMUSG00000029032 38 0.9 - - - - - 0.900 Rho guanine nucleotide exchange factor (GEF) 16 [Source:MGI Symbol;Acc:MGI:2446219]
53. 5430400D12Rik ENSMUSG00000097699 34 0.9 - - - - 0.900 - RIKEN cDNA 5430400D12 gene [Source:MGI Symbol;Acc:MGI:1918589]
54. Rpl15-ps3 ENSMUSG00000061167 35 0.897 - - - - - 0.897 ribosomal protein L15, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3782952]
55. Rerg ENSMUSG00000030222 33 0.897 - - - - - 0.897 RAS-like, estrogen-regulated, growth-inhibitor [Source:MGI Symbol;Acc:MGI:2665139]
56. C1qtnf4 ENSMUSG00000040794, ENSMUSG00000110961 77 0.896 - - - - 0.896 - C1q and tumor necrosis factor related protein 4 [Source:MGI Symbol;Acc:MGI:1914695]
57. Necab3 ENSMUSG00000027489 37 0.896 - - - - 0.896 - N-terminal EF-hand calcium binding protein 3 [Source:MGI Symbol;Acc:MGI:1861721]
58. Zfp658 ENSMUSG00000056592 193 0.894 - - - - 0.894 - zinc finger protein 658 [Source:MGI Symbol;Acc:MGI:2652821]
59. Zfp786 ENSMUSG00000051499 38 0.891 - - - - 0.891 - zinc finger protein 786 [Source:MGI Symbol;Acc:MGI:3026883]
60. Acss3 ENSMUSG00000035948 40 0.891 - - - - 0.891 - acyl-CoA synthetase short-chain family member 3 [Source:MGI Symbol;Acc:MGI:2685720]
61. Phex ENSMUSG00000057457 65 0.889 - - - - 0.889 - phosphate regulating endopeptidase homolog, X-linked [Source:MGI Symbol;Acc:MGI:107489]
62. Cdc42bpb ENSMUSG00000021279 23 0.888 - - 0.888 - - - CDC42 binding protein kinase beta [Source:MGI Symbol;Acc:MGI:2136459]
63. Gm23049 ENSMUSG00000095989 48 0.885 - - - - 0.885 - predicted gene, 23049 [Source:MGI Symbol;Acc:MGI:5452826]
64. Nat14 ENSMUSG00000035285 53 0.885 - - - - 0.885 - N-acetyltransferase 14 [Source:MGI Symbol;Acc:MGI:3039561]
65. Itgb4 ENSMUSG00000020758 43 0.882 - - - - 0.882 - integrin beta 4 [Source:MGI Symbol;Acc:MGI:96613]
66. Ripk4 ENSMUSG00000005251 52 0.878 - - - - - 0.878 receptor-interacting serine-threonine kinase 4 [Source:MGI Symbol;Acc:MGI:1919638]
67. Gm15966 ENSMUSG00000085865 150 0.875 - - - - 0.875 - predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
68. Oasl1 ENSMUSG00000041827 13 0.875 - - - - - 0.875 2'-5' oligoadenylate synthetase-like 1 [Source:MGI Symbol;Acc:MGI:2180849]
69. Pitpnm1 ENSMUSG00000024851, ENSMUSG00000097096 52 0.87 - - - - 0.870 - phosphatidylinositol transfer protein, membrane-associated 1 [Source:MGI Symbol;Acc:MGI:1197524]
70. Gm17308 ENSMUSG00000096922 15 0.87 - - 0.870 - - - predicted gene, 17308 [Source:MGI Symbol;Acc:MGI:4936942]
71. Gm5844 ENSMUSG00000082896 73 0.867 - - - - 0.867 - predicted gene 5844 [Source:MGI Symbol;Acc:MGI:3645252]
72. Gm6480 ENSMUSG00000082894 43 0.866 - - 0.866 - - - predicted pseudogene 6480 [Source:MGI Symbol;Acc:MGI:3647765]
73. Gm13436 ENSMUSG00000083716 141 0.86 - - - - 0.860 - predicted gene 13436 [Source:MGI Symbol;Acc:MGI:3651005]
74. Arhgef6 ENSMUSG00000031133 320 0.859 - - - - 0.859 - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
75. Tmco4 ENSMUSG00000041143 30 0.857 - - - - - 0.857 transmembrane and coiled-coil domains 4 [Source:MGI Symbol;Acc:MGI:1924306]
76. Cox16 ENSMUSG00000091803 212 0.856 - - - - 0.856 - cytochrome c oxidase assembly protein 16 [Source:MGI Symbol;Acc:MGI:1913522]
77. Slc39a5 ENSMUSG00000039878 18 0.854 - 0.854 - - - - solute carrier family 39 (metal ion transporter), member 5 [Source:MGI Symbol;Acc:MGI:1919336]
78. Xkr4 ENSMUSG00000051951 11 0.854 - 0.854 - - - - X-linked Kx blood group related 4 [Source:MGI Symbol;Acc:MGI:3528744]
79. Ccdc73 ENSMUSG00000045106 48 0.853 - - - - - 0.853 coiled-coil domain containing 73 [Source:MGI Symbol;Acc:MGI:3606488]
80. Zfp52 ENSMUSG00000051341 38 0.853 - - - - - 0.853 zinc finger protein 52 [Source:MGI Symbol;Acc:MGI:99199]
81. Gm12834 ENSMUSG00000081138 23 0.851 - - 0.851 - - - predicted gene 12834 [Source:MGI Symbol;Acc:MGI:3649428]
82. Lmbrd2 ENSMUSG00000039704, ENSMUSG00000116236 49 0.85 - - 0.850 - - - LMBR1 domain containing 2 [Source:NCBI gene;Acc:320506]
83. Gm13219 ENSMUSG00000079604 19 0.849 - - 0.849 - - - predicted gene 13219 [Source:MGI Symbol;Acc:MGI:3651678]
84. Chrna5 ENSMUSG00000035594 21 0.848 - - 0.848 - - - cholinergic receptor, nicotinic, alpha polypeptide 5 [Source:MGI Symbol;Acc:MGI:87889]
85. Spata31 ENSMUSG00000056223 27 0.847 - - - - - 0.847 spermatogenesis associated 31 [Source:MGI Symbol;Acc:MGI:1925374]
86. Gm3150 ENSMUSG00000096173 83 0.846 - - - - 0.846 - predicted gene 3150 [Source:MGI Symbol;Acc:MGI:3781329]
87. Izumo2 ENSMUSG00000066500 75 0.845 - - - - - 0.845 IZUMO family member 2 [Source:MGI Symbol;Acc:MGI:1922760]
88. Gm10101 ENSMUSG00000061510 21 0.843 - - - - - 0.843 predicted gene 10101 [Source:MGI Symbol;Acc:MGI:3641713]
89. Fev ENSMUSG00000055197 37 0.842 - - - - - 0.842 FEV (ETS oncogene family) [Source:MGI Symbol;Acc:MGI:2449712]
90. Gm27010 ENSMUSG00000098183 452 0.841 - - - - 0.841 - predicted gene, 27010 [Source:MGI Symbol;Acc:MGI:5504125]
91. Klhl36 ENSMUSG00000031828 61 0.839 - - - - 0.839 - kelch-like 36 [Source:MGI Symbol;Acc:MGI:2385305]
92. Ptplad2 Ptplad2 382 0.837 - - - - 0.837 -
93. Rbm45 ENSMUSG00000042369 852 0.837 - - - - 0.837 - RNA binding motif protein 45 [Source:MGI Symbol;Acc:MGI:2387367]
94. Slc26a6 ENSMUSG00000023259, ENSMUSG00000107138 52 0.836 - - - - 0.836 - solute carrier family 26, member 6 [Source:MGI Symbol;Acc:MGI:2159728]
95. Syndig1 ENSMUSG00000074736 24 0.836 - - - - 0.836 - synapse differentiation inducing 1 [Source:MGI Symbol;Acc:MGI:3702158]
96. Tmsb15l ENSMUSG00000072955 34 0.835 - - 0.835 - - - thymosin beta 15b like [Source:MGI Symbol;Acc:MGI:3026988]
97. Pgbd1 ENSMUSG00000055313 110 0.834 - - - - - 0.834 piggyBac transposable element derived 1 [Source:MGI Symbol;Acc:MGI:2441675]
98. Cct6b ENSMUSG00000020698 8 0.831 - - 0.831 - - - chaperonin containing Tcp1, subunit 6b (zeta) [Source:MGI Symbol;Acc:MGI:1329013]
99. A630033H20Rik 56 0.825 - - - - - 0.825 RIKEN cDNA A630033H20 gene, transcript variant 2
100. Vamp7-ps ENSMUSG00000082519 28 0.824 - - 0.824 - - - vesicle-associated membrane protein 7, pseudogene [Source:MGI Symbol;Acc:MGI:3652239]

There are 167 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA