Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Shroom3

Gene Name Gene ID Reads Annotation
Shroom3 ENSMUSG00000029381 2016 shroom family member 3 [Source:MGI Symbol;Acc:MGI:1351655]







Genes with expression patterns similar to Shroom3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Shroom3 ENSMUSG00000029381 2016 6 1.000 1.000 1.000 1.000 1.000 1.000 shroom family member 3 [Source:MGI Symbol;Acc:MGI:1351655]
2. Tbx5 ENSMUSG00000018263 655 1.555 - 0.854 0.701 - - - T-box 5 [Source:MGI Symbol;Acc:MGI:102541]
3. Tln1 ENSMUSG00000028465 7827 1.528 0.812 - 0.716 - - - talin 1 [Source:MGI Symbol;Acc:MGI:1099832]
4. Phospho2 ENSMUSG00000027088 921 1.52 0.794 0.726 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
5. Med13l ENSMUSG00000018076 1863 1.518 0.795 0.723 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
6. Dpy19l4 ENSMUSG00000045205 962 1.513 0.798 0.715 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
7. Snx24 ENSMUSG00000024535 873 0.858 0.858 - - - - - sorting nexing 24 [Source:MGI Symbol;Acc:MGI:1916476]
8. Etfa ENSMUSG00000032314 2838 0.851 0.851 - - - - - electron transferring flavoprotein, alpha polypeptide [Source:MGI Symbol;Acc:MGI:106092]
9. Trabd2b ENSMUSG00000070867 1254 0.849 0.849 - - - - - TraB domain containing 2B [Source:MGI Symbol;Acc:MGI:3650152]
10. Cpq ENSMUSG00000039007 1117 0.839 0.839 - - - - - carboxypeptidase Q [Source:MGI Symbol;Acc:MGI:1889205]
11. Il11ra1 ENSMUSG00000073889 1944 0.836 0.836 - - - - - interleukin 11 receptor, alpha chain 1 [Source:MGI Symbol;Acc:MGI:107426]
12. Ddr2 ENSMUSG00000026674 1972 0.836 0.836 - - - - - discoidin domain receptor family, member 2 [Source:MGI Symbol;Acc:MGI:1345277]
13. Tcf20 ENSMUSG00000041852 761 0.834 - 0.834 - - - - transcription factor 20 [Source:MGI Symbol;Acc:MGI:108399]
14. Nfat5 ENSMUSG00000003847 2939 0.832 0.832 - - - - - nuclear factor of activated T cells 5 [Source:MGI Symbol;Acc:MGI:1859333]
15. Ube2h ENSMUSG00000039159 3290 0.832 0.832 - - - - - ubiquitin-conjugating enzyme E2H [Source:MGI Symbol;Acc:MGI:104632]
16. Cnksr2 ENSMUSG00000025658 333 0.83 0.830 - - - - - connector enhancer of kinase suppressor of Ras 2 [Source:MGI Symbol;Acc:MGI:2661175]
17. Poglut1 ENSMUSG00000034064 2213 0.83 0.830 - - - - - protein O-glucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2444232]
18. Scamp3 ENSMUSG00000028049 1569 0.829 - 0.829 - - - - secretory carrier membrane protein 3 [Source:MGI Symbol;Acc:MGI:1346346]
19. Pitpnc1 ENSMUSG00000040430 4748 0.826 0.826 - - - - - phosphatidylinositol transfer protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1919045]
20. C2cd3 ENSMUSG00000047248 1181 0.826 - 0.826 - - - - C2 calcium-dependent domain containing 3 [Source:MGI Symbol;Acc:MGI:2142166]
21. Eci1 ENSMUSG00000024132 1403 0.826 - 0.826 - - - - enoyl-Coenzyme A delta isomerase 1 [Source:MGI Symbol;Acc:MGI:94871]
22. Zfp618 ENSMUSG00000028358 8056 0.826 0.826 - - - - - zinc finger protein 618 [Source:MGI Symbol;Acc:MGI:1919950]
23. Podxl ENSMUSG00000025608 2292 0.824 0.824 - - - - - podocalyxin-like [Source:MGI Symbol;Acc:MGI:1351317]
24. Hs3st3a1 ENSMUSG00000047759 1322 0.82 0.820 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 [Source:MGI Symbol;Acc:MGI:1333861]
25. Sgol1 1886 0.818 - 0.818 - - - - shugoshin-like 1 (S. pombe), transcript variant X2
26. Nr4a2 ENSMUSG00000026826 594 0.818 - 0.818 - - - - nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456]
27. Lamb1 ENSMUSG00000002900 4419 0.815 0.815 - - - - - laminin B1 [Source:MGI Symbol;Acc:MGI:96743]
28. Ngfrap1 42491 0.813 0.813 - - - - - nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
29. Cbfa2t3 ENSMUSG00000006362 817 0.811 0.811 - - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
30. Gas8 ENSMUSG00000040220 1218 0.81 0.810 - - - - - growth arrest specific 8 [Source:MGI Symbol;Acc:MGI:1202386]
31. Znhit6 ENSMUSG00000074182 1728 0.81 0.810 - - - - - zinc finger, HIT type 6 [Source:MGI Symbol;Acc:MGI:1916996]
32. Nelfcd ENSMUSG00000016253 3196 0.809 0.809 - - - - - negative elongation factor complex member C/D, Th1l [Source:MGI Symbol;Acc:MGI:1926424]
33. Pgam1-ps2 ENSMUSG00000082016 3224 0.809 0.809 - - - - - phosphoglycerate mutase 1, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3645709]
34. Rasip1 ENSMUSG00000044562 644 0.808 0.808 - - - - - Ras interacting protein 1 [Source:MGI Symbol;Acc:MGI:1917153]
35. Tipin ENSMUSG00000032397 3539 0.808 0.808 - - - - - timeless interacting protein [Source:MGI Symbol;Acc:MGI:1921571]
36. Nup153 ENSMUSG00000021374 1803 0.807 - 0.807 - - - - nucleoporin 153 [Source:MGI Symbol;Acc:MGI:2385621]
37. Tcf7l2 ENSMUSG00000024985 5614 0.806 0.806 - - - - - transcription factor 7 like 2, T cell specific, HMG box [Source:MGI Symbol;Acc:MGI:1202879]
38. Ghr ENSMUSG00000055737 2419 0.804 0.804 - - - - - growth hormone receptor [Source:MGI Symbol;Acc:MGI:95708]
39. Purg ENSMUSG00000049184 1217 0.803 0.803 - - - - - purine-rich element binding protein G [Source:MGI Symbol;Acc:MGI:1922279]
40. Zbtb39 ENSMUSG00000044617 771 0.803 0.803 - - - - - zinc finger and BTB domain containing 39 [Source:MGI Symbol;Acc:MGI:2443316]
41. Maf ENSMUSG00000055435 2645 0.802 0.802 - - - - - avian musculoaponeurotic fibrosarcoma oncogene homolog [Source:MGI Symbol;Acc:MGI:96909]
42. Gnb2 ENSMUSG00000029713 2747 0.802 0.802 - - - - - guanine nucleotide binding protein (G protein), beta 2 [Source:MGI Symbol;Acc:MGI:95784]
43. Tbc1d32 ENSMUSG00000038122 287 0.802 0.802 - - - - - TBC1 domain family, member 32 [Source:MGI Symbol;Acc:MGI:2442827]
44. Ndufa2 ENSMUSG00000014294 8300 0.801 0.801 - - - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:MGI Symbol;Acc:MGI:1343103]
45. Lig3 ENSMUSG00000020697 1227 0.801 - 0.801 - - - - ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]
46. Simc1 ENSMUSG00000043183 1054 0.801 0.801 - - - - - SUMO-interacting motifs containing 1 [Source:MGI Symbol;Acc:MGI:2442599]
47. Ppcdc ENSMUSG00000063849 574 0.8 0.800 - - - - - phosphopantothenoylcysteine decarboxylase [Source:MGI Symbol;Acc:MGI:1914062]
48. Pitx2 ENSMUSG00000028023 3658 0.8 0.800 - - - - - paired-like homeodomain transcription factor 2 [Source:MGI Symbol;Acc:MGI:109340]
49. Prmt2 ENSMUSG00000020230 2477 0.798 0.798 - - - - - protein arginine N-methyltransferase 2 [Source:MGI Symbol;Acc:MGI:1316652]
50. Fancb ENSMUSG00000047757 576 0.798 0.798 - - - - - Fanconi anemia, complementation group B [Source:MGI Symbol;Acc:MGI:2448558]
51. Zfp282 ENSMUSG00000025821 1657 0.798 0.798 - - - - - zinc finger protein 282 [Source:MGI Symbol;Acc:MGI:2141413]
52. Hic2 ENSMUSG00000050240 2857 0.798 0.798 - - - - - hypermethylated in cancer 2 [Source:MGI Symbol;Acc:MGI:1929869]
53. Rce1 ENSMUSG00000024889 973 0.797 0.797 - - - - - Ras converting CAAX endopeptidase 1 [Source:MGI Symbol;Acc:MGI:1336895]
54. Becn1 ENSMUSG00000035086 200 0.795 0.795 - - - - - beclin 1, autophagy related [Source:MGI Symbol;Acc:MGI:1891828]
55. Hiatl1 Hiatl1 766 0.795 0.795 - - - - -
56. Ackr3 ENSMUSG00000044337 800 0.795 0.795 - - - - - atypical chemokine receptor 3 [Source:MGI Symbol;Acc:MGI:109562]
57. Rpl17 ENSMUSG00000062328 1756 0.794 0.794 - - - - - ribosomal protein L17 [Source:MGI Symbol;Acc:MGI:2448270]
58. Dcaf17 ENSMUSG00000041966 1824 0.794 0.794 - - - - - DDB1 and CUL4 associated factor 17 [Source:MGI Symbol;Acc:MGI:1923013]
59. Trmt1l ENSMUSG00000053286 639 0.794 0.794 - - - - - tRNA methyltransferase 1 like [Source:MGI Symbol;Acc:MGI:1916185]
60. Sap30bp ENSMUSG00000020755 1520 0.794 0.794 - - - - - SAP30 binding protein [Source:MGI Symbol;Acc:MGI:1927479]
61. Prdm6 ENSMUSG00000069378 328 0.794 0.794 - - - - - PR domain containing 6 [Source:MGI Symbol;Acc:MGI:2684938]
62. Timm9 ENSMUSG00000021079 1699 0.794 0.794 - - - - - translocase of inner mitochondrial membrane 9 [Source:MGI Symbol;Acc:MGI:1353436]
63. Shoc2 ENSMUSG00000024976 1489 0.793 0.793 - - - - - Shoc2, leucine rich repeat scaffold protein [Source:MGI Symbol;Acc:MGI:1927197]
64. Syde1 ENSMUSG00000032714 4090 0.793 0.793 - - - - - synapse defective 1, Rho GTPase, homolog 1 (C. elegans) [Source:MGI Symbol;Acc:MGI:1918959]
65. Kras ENSMUSG00000030265 3040 0.792 - 0.792 - - - - Kirsten rat sarcoma viral oncogene homolog [Source:MGI Symbol;Acc:MGI:96680]
66. Nell1 ENSMUSG00000055409 250 0.792 0.792 - - - - - NEL-like 1 [Source:MGI Symbol;Acc:MGI:2443902]
67. Emp3 ENSMUSG00000040212 1609 0.792 0.792 - - - - - epithelial membrane protein 3 [Source:MGI Symbol;Acc:MGI:1098729]
68. Megf6 ENSMUSG00000057751 2314 0.792 0.792 - - - - - multiple EGF-like-domains 6 [Source:MGI Symbol;Acc:MGI:1919351]
69. Med22 ENSMUSG00000015776 736 0.791 0.791 - - - - - mediator complex subunit 22 [Source:MGI Symbol;Acc:MGI:98446]
70. Tigd2 ENSMUSG00000049232 1361 0.791 0.791 - - - - - tigger transposable element derived 2 [Source:MGI Symbol;Acc:MGI:1915390]
71. Rgl1 ENSMUSG00000026482 938 0.791 0.791 - - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
72. Hlx ENSMUSG00000039377 1028 0.79 0.790 - - - - - H2.0-like homeobox [Source:MGI Symbol;Acc:MGI:96109]
73. Fhl2 ENSMUSG00000008136 2073 0.789 0.789 - - - - - four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
74. Cab39l ENSMUSG00000021981 1114 0.789 0.789 - - - - - calcium binding protein 39-like [Source:MGI Symbol;Acc:MGI:1914081]
75. Slc35f6 ENSMUSG00000029175 362 0.789 0.789 - - - - - solute carrier family 35, member F6 [Source:MGI Symbol;Acc:MGI:1922169]
76. Wdr13 ENSMUSG00000031166 538 0.788 0.788 - - - - - WD repeat domain 13 [Source:MGI Symbol;Acc:MGI:1914661]
77. Mum1 ENSMUSG00000020156 1943 0.788 0.788 - - - - - melanoma associated antigen (mutated) 1 [Source:MGI Symbol;Acc:MGI:1915364]
78. Psmc3ip ENSMUSG00000019303 704 0.787 0.787 - - - - - proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein [Source:MGI Symbol;Acc:MGI:1098610]
79. Nostrin ENSMUSG00000034738 97 0.787 0.787 - - - - - nitric oxide synthase trafficker [Source:MGI Symbol;Acc:MGI:3606242]
80. Ccdc93 ENSMUSG00000026339 541 0.786 0.786 - - - - - coiled-coil domain containing 93 [Source:MGI Symbol;Acc:MGI:1918079]
81. Mkks ENSMUSG00000027274 1777 0.786 0.786 - - - - - McKusick-Kaufman syndrome [Source:MGI Symbol;Acc:MGI:1891836]
82. Ndufs8 ENSMUSG00000059734 1529 0.786 0.786 - - - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:MGI Symbol;Acc:MGI:2385079]
83. Cit ENSMUSG00000029516 2303 0.786 0.786 - - - - - citron [Source:MGI Symbol;Acc:MGI:105313]
84. Adck2 ENSMUSG00000046947 310 0.786 0.786 - - - - - aarF domain containing kinase 2 [Source:MGI Symbol;Acc:MGI:1889336]
85. D10Wsu102e ENSMUSG00000020255 1076 0.786 0.786 - - - - - DNA segment, Chr 10, Wayne State University 102, expressed [Source:MGI Symbol;Acc:MGI:106381]
86. Gtse1 ENSMUSG00000022385 1450 0.785 0.785 - - - - - G two S phase expressed protein 1 [Source:MGI Symbol;Acc:MGI:1352755]
87. Mrpl38 ENSMUSG00000020775 1277 0.785 0.785 - - - - - mitochondrial ribosomal protein L38 [Source:MGI Symbol;Acc:MGI:1926269]
88. Snapin ENSMUSG00000001018 1886 0.785 0.785 - - - - - SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
89. Kpna4 ENSMUSG00000027782 3679 0.785 0.785 - - - - - karyopherin (importin) alpha 4 [Source:MGI Symbol;Acc:MGI:1100848]
90. Jak1 ENSMUSG00000028530 5491 0.784 0.784 - - - - - Janus kinase 1 [Source:MGI Symbol;Acc:MGI:96628]
91. Nxt1 ENSMUSG00000036992 2316 0.784 0.784 - - - - - NTF2-related export protein 1 [Source:MGI Symbol;Acc:MGI:1929619]
92. Fkbp11 ENSMUSG00000003355 578 0.784 0.784 - - - - - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
93. Atp6v0e ENSMUSG00000015575 2494 0.784 - 0.784 - - - - ATPase, H+ transporting, lysosomal V0 subunit E [Source:MGI Symbol;Acc:MGI:1328318]
94. Gba ENSMUSG00000028048 446 0.783 0.783 - - - - - glucosidase, beta, acid [Source:MGI Symbol;Acc:MGI:95665]
95. Wdr82 ENSMUSG00000020257 5069 0.783 0.783 - - - - - WD repeat domain containing 82 [Source:MGI Symbol;Acc:MGI:1924555]
96. Clip3 ENSMUSG00000013921 4769 0.783 - 0.783 - - - - CAP-GLY domain containing linker protein 3 [Source:MGI Symbol;Acc:MGI:1923936]
97. Bcl9 ENSMUSG00000038256 4966 0.782 0.782 - - - - - B cell CLL/lymphoma 9 [Source:MGI Symbol;Acc:MGI:1924828]
98. Ppil2 ENSMUSG00000022771 1016 0.782 0.782 - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:MGI Symbol;Acc:MGI:2447857]
99. Gucd1 ENSMUSG00000033416 864 0.782 0.782 - - - - - guanylyl cyclase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916028]
100. Nucb2 ENSMUSG00000030659 298 0.782 0.782 - - - - - nucleobindin 2 [Source:MGI Symbol;Acc:MGI:1858179]

There are 268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA