Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Shroom1

Gene Name Gene ID Reads Annotation
Shroom1 ENSMUSG00000018387 17 shroom family member 1 [Source:MGI Symbol;Acc:MGI:1919024]







Genes with expression patterns similar to Shroom1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Shroom1 ENSMUSG00000018387 17 6 1.000 1.000 1.000 1.000 1.000 1.000 shroom family member 1 [Source:MGI Symbol;Acc:MGI:1919024]
2. Tespa1 ENSMUSG00000034833 3 0.992 0.992 - - - - - thymocyte expressed, positive selection associated 1 [Source:MGI Symbol;Acc:MGI:1914846]
3. Kcnh3 ENSMUSG00000037579 5 0.992 0.992 - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:MGI Symbol;Acc:MGI:1341723]
4. Gm2415 ENSMUSG00000086119 5 0.992 0.992 - - - - - predicted gene 2415 [Source:MGI Symbol;Acc:MGI:3780582]
5. Fscn3 ENSMUSG00000029707 4 0.992 0.992 - - - - - fascin actin-bundling protein 3 [Source:MGI Symbol;Acc:MGI:1890386]
6. Gm5356 ENSMUSG00000069962 9 0.992 0.992 - - - - - predicted pseudogene 5356 [Source:MGI Symbol;Acc:MGI:3643649]
7. Osbpl10 ENSMUSG00000040875 9 0.992 0.992 - - - - - oxysterol binding protein-like 10 [Source:MGI Symbol;Acc:MGI:1921736]
8. Gm22783 ENSMUSG00000077277 3 0.992 0.992 - - - - - predicted gene, 22783 [Source:MGI Symbol;Acc:MGI:5452560]
9. Il17f ENSMUSG00000041872 5 0.992 0.992 - - - - - interleukin 17F [Source:MGI Symbol;Acc:MGI:2676631]
10. Gm4847 ENSMUSG00000051081 3 0.992 0.992 - - - - - predicted gene 4847 [Source:MGI Symbol;Acc:MGI:3643320]
11. 1700064E03Rik 1700064E03Rik 8 0.992 0.992 - - - - -
12. Olfr732 ENSMUSG00000091873 2 0.992 0.992 - - - - - olfactory receptor 732 [Source:MGI Symbol;Acc:MGI:3030566]
13. Gm12900 ENSMUSG00000082634 5 0.992 0.992 - - - - - predicted gene 12900 [Source:MGI Symbol;Acc:MGI:3650387]
14. Dmrtc1a ENSMUSG00000031323 11 0.992 0.992 - - - - - DMRT-like family C1a [Source:MGI Symbol;Acc:MGI:1918137]
15. Dear1 2 0.992 0.992 - - - - - dual endothelin 1/angiotensin II receptor 1
16. Rps15a-ps2 ENSMUSG00000067351 6 0.992 0.992 - - - - - ribosomal protein S15A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3643316]
17. Itgae ENSMUSG00000005947 13 0.985 0.985 - - - - - integrin alpha E, epithelial-associated [Source:MGI Symbol;Acc:MGI:1298377]
18. Ly6g6e ENSMUSG00000013766 3 0.976 0.976 - - - - - lymphocyte antigen 6 complex, locus G6E [Source:MGI Symbol;Acc:MGI:1917524]
19. Gm16741 ENSMUSG00000084775 11 0.975 0.975 - - - - - predicted gene, 16741 [Source:MGI Symbol;Acc:MGI:4439665]
20. RP24-338F2.1 RP24-338F2.1 5 0.967 0.967 - - - - -
21. Slc16a11 ENSMUSG00000040938 5 0.962 0.962 - - - - - solute carrier family 16 (monocarboxylic acid transporters), member 11 [Source:MGI Symbol;Acc:MGI:2663709]
22. Gm16880 Gm16880 3 0.962 0.962 - - - - -
23. Grm1 ENSMUSG00000019828 8 0.962 0.962 - - - - - glutamate receptor, metabotropic 1 [Source:MGI Symbol;Acc:MGI:1351338]
24. Tnfsf15 ENSMUSG00000050395 14 0.954 0.954 - - - - - tumor necrosis factor (ligand) superfamily, member 15 [Source:MGI Symbol;Acc:MGI:2180140]
25. RP23-446B17.2 RP23-446B17.2 4 0.953 0.953 - - - - -
26. Pnldc1 ENSMUSG00000073460 25 0.951 0.951 - - - - - poly(A)-specific ribonuclease (PARN)-like domain containing 1 [Source:MGI Symbol;Acc:MGI:2685159]
27. Carf ENSMUSG00000026017 38 0.95 0.950 - - - - - calcium response factor [Source:MGI Symbol;Acc:MGI:2182269]
28. Arhgap9 ENSMUSG00000040345 25 0.933 0.933 - - - - - Rho GTPase activating protein 9 [Source:MGI Symbol;Acc:MGI:2143764]
29. Myh6 ENSMUSG00000040752 18 0.931 0.931 - - - - - myosin, heavy polypeptide 6, cardiac muscle, alpha [Source:MGI Symbol;Acc:MGI:97255]
30. Prss22 ENSMUSG00000045027 20 0.928 0.928 - - - - - protease, serine 22 [Source:MGI Symbol;Acc:MGI:1918085]
31. Fat2 ENSMUSG00000055333 14 0.917 0.917 - - - - - FAT atypical cadherin 2 [Source:MGI Symbol;Acc:MGI:2685369]
32. Cabp5 ENSMUSG00000005649 14 0.917 0.917 - - - - - calcium binding protein 5 [Source:MGI Symbol;Acc:MGI:1352746]
33. Gm15689 ENSMUSG00000089924 7 0.908 0.908 - - - - - predicted gene 15689 [Source:MGI Symbol;Acc:MGI:3783130]
34. Gm9835 Gm9835 15 0.904 0.904 - - - - -
35. 1700109H08Rik ENSMUSG00000008307 17 0.9 0.900 - - - - - RIKEN cDNA 1700109H08 gene [Source:MGI Symbol;Acc:MGI:1924286]
36. Gm15055 Gm15055 18 0.895 0.895 - - - - -
37. Cdk15 ENSMUSG00000026023 32 0.895 0.895 - - - - - cyclin-dependent kinase 15 [Source:MGI Symbol;Acc:MGI:3583944]
38. 1700003M07Rik ENSMUSG00000085389 6 0.887 0.887 - - - - - RIKEN cDNA 1700003M07 gene [Source:MGI Symbol;Acc:MGI:1919475]
39. Gm23458 ENSMUSG00000065191 51 0.886 0.886 - - - - - predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
40. Gm13550 ENSMUSG00000084250 5 0.885 0.885 - - - - - predicted gene 13550 [Source:MGI Symbol;Acc:MGI:3651031]
41. Gm4285 ENSMUSG00000085829 51 0.883 0.883 - - - - - predicted gene 4285 [Source:MGI Symbol;Acc:MGI:3782463]
42. Gm14865 ENSMUSG00000082222 8 0.882 0.882 - - - - - predicted gene 14865 [Source:MGI Symbol;Acc:MGI:3705664]
43. Heatr2 Heatr2 29 0.869 0.869 - - - - -
44. Gm16349 ENSMUSG00000085678 4 0.865 0.865 - - - - - predicted gene 16349 [Source:MGI Symbol;Acc:MGI:3840114]
45. Gm13657 ENSMUSG00000086813 15 0.864 - - - - - 0.864 predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
46. Gm14420 Gm14420 22 0.862 0.862 - - - - -
47. Fam212b 49 0.855 0.855 - - - - - family with sequence similarity 212, member B, transcript variant X1
48. Gm25188 ENSMUSG00000065847 6 0.853 - - - - - 0.853 predicted gene, 25188 [Source:MGI Symbol;Acc:MGI:5454965]
49. Gm11713 ENSMUSG00000085245 5 0.853 - - - - - 0.853 predicted gene 11713 [Source:MGI Symbol;Acc:MGI:3652139]
50. Myl2 ENSMUSG00000013936 17 0.852 0.852 - - - - - myosin, light polypeptide 2, regulatory, cardiac, slow [Source:MGI Symbol;Acc:MGI:97272]
51. Snhg3 ENSMUSG00000085241 17 0.851 0.851 - - - - - small nucleolar RNA host gene 3 [Source:MGI Symbol;Acc:MGI:2684817]
52. E530011L22Rik ENSMUSG00000097820 57 0.846 0.846 - - - - - RIKEN cDNA E530011L22 gene [Source:MGI Symbol;Acc:MGI:2443770]
53. Ankrd45 ENSMUSG00000044835 23 0.841 0.841 - - - - - ankyrin repeat domain 45 [Source:MGI Symbol;Acc:MGI:1921094]
54. Zfp112 ENSMUSG00000052675 56 0.838 0.838 - - - - - zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]
55. Lrrc29 ENSMUSG00000041679 19 0.834 0.834 - - - - - leucine rich repeat containing 29 [Source:MGI Symbol;Acc:MGI:2443262]
56. Zfp119b ENSMUSG00000062101 39 0.834 0.834 - - - - - zinc finger protein 119b [Source:MGI Symbol;Acc:MGI:2385323]
57. Fam221b ENSMUSG00000043633 10 0.83 0.830 - - - - - family with sequence similarity 221, member B [Source:MGI Symbol;Acc:MGI:2441678]
58. Med12l ENSMUSG00000056476 27 0.825 0.825 - - - - - mediator complex subunit 12-like [Source:MGI Symbol;Acc:MGI:2139916]
59. Gm21847 ENSMUSG00000094230, ENSMUSG00000097570 4 0.821 - 0.821 - - - - predicted gene, 21847 [Source:MGI Symbol;Acc:MGI:5434011]
60. Slc5a10 ENSMUSG00000042371 2 0.821 - 0.821 - - - - solute carrier family 5 (sodium/glucose cotransporter), member 10 [Source:MGI Symbol;Acc:MGI:1926089]
61. Gm6587 ENSMUSG00000081245 2 0.821 - 0.821 - - - - predicted gene 6587 [Source:MGI Symbol;Acc:MGI:3645486]
62. Gm12574 Gm12574 1 0.821 - 0.821 - - - -
63. Fbxo24 ENSMUSG00000089984 6 0.821 - 0.821 - - - - F-box protein 24 [Source:MGI Symbol;Acc:MGI:1918426]
64. Ccnd3-ps ENSMUSG00000080708 5 0.821 0.821 - - - - - cyclin D3, pseudogene [Source:MGI Symbol;Acc:MGI:1100505]
65. Galnt15 ENSMUSG00000021903 3 0.821 - 0.821 - - - - polypeptide N-acetylgalactosaminyltransferase 15 [Source:MGI Symbol;Acc:MGI:1926004]
66. Ppp1r3g ENSMUSG00000050423 28 0.821 - 0.821 - - - - protein phosphatase 1, regulatory subunit 3G [Source:MGI Symbol;Acc:MGI:1923737]
67. Gm14302 ENSMUSG00000085760 10 0.821 - 0.821 - - - - predicted gene 14302 [Source:MGI Symbol;Acc:MGI:3701953]
68. Gm14403 ENSMUSG00000094786 4 0.821 - 0.821 - - - - predicted gene 14403 [Source:MGI Symbol;Acc:MGI:3649813]
69. 4930483C13Rik 4930483C13Rik 1 0.821 - 0.821 - - - -
70. 5830473C10Rik ENSMUSG00000070690 3 0.821 - 0.821 - - - - RIKEN cDNA 5830473C10 gene [Source:MGI Symbol;Acc:MGI:1923342]
71. Gm14239 ENSMUSG00000080237 24 0.821 - 0.821 - - - - predicted gene 14239 [Source:MGI Symbol;Acc:MGI:3651698]
72. F2 ENSMUSG00000027249 44 0.821 - 0.821 - - - - coagulation factor II [Source:MGI Symbol;Acc:MGI:88380]
73. Gm11934 ENSMUSG00000086127 5 0.821 - 0.821 - - - - predicted gene 11934 [Source:MGI Symbol;Acc:MGI:3649212]
74. Gm9581 Gm9581 4 0.821 - 0.821 - - - -
75. Serpinb12 ENSMUSG00000059956 1 0.821 - 0.821 - - - - serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12 [Source:MGI Symbol;Acc:MGI:1919119]
76. Gm16047 Gm16047 5 0.821 - 0.821 - - - -
77. Hmgb1-ps4 ENSMUSG00000084221, ENSMUSG00000106792 41 0.807 0.807 - - - - - high mobility group box 1, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3768540]
78. Mamld1 ENSMUSG00000059401 44 0.805 - 0.805 - - - - mastermind-like domain containing 1 [Source:MGI Symbol;Acc:MGI:3045303]
79. Gm12412 ENSMUSG00000083685 7 0.798 - - - - - 0.798 predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
80. Sspo ENSMUSG00000029797 15 0.798 - - - - - 0.798 SCO-spondin [Source:MGI Symbol;Acc:MGI:2674311]
81. Prl2c1 ENSMUSG00000062551 9 0.798 - - - - - 0.798 Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
82. Gm12123 ENSMUSG00000082309 1 0.798 - - - - - 0.798 predicted gene 12123 [Source:MGI Symbol;Acc:MGI:3652210]
83. Gm10222 ENSMUSG00000067736 16 0.798 - - - - - 0.798 predicted gene 10222 [Source:MGI Symbol;Acc:MGI:3642643]
84. Cecr5 100 0.798 0.798 - - - - - cat eye syndrome chromosome region, candidate 5, transcript variant X1
85. Gm13044 Gm13044 6 0.798 - - - - - 0.798
86. Olfr859 ENSMUSG00000095448 1 0.798 - - - - - 0.798 olfactory receptor 859 [Source:MGI Symbol;Acc:MGI:3030693]
87. Xist ENSMUSG00000086503 4896 0.798 - - - - - 0.798 inactive X specific transcripts [Source:MGI Symbol;Acc:MGI:98974]
88. Slc22a2 ENSMUSG00000040966 4 0.798 - - - - - 0.798 solute carrier family 22 (organic cation transporter), member 2 [Source:MGI Symbol;Acc:MGI:1335072]
89. 9330175E14Rik ENSMUSG00000097194 2 0.798 - - - - - 0.798 RIKEN cDNA 9330175E14 gene [Source:MGI Symbol;Acc:MGI:2443913]
90. 4930548H24Rik ENSMUSG00000029138 3 0.798 - - - - - 0.798 RIKEN cDNA 4930548H24 gene [Source:MGI Symbol;Acc:MGI:1914906]
91. Osgin1 ENSMUSG00000074063 26 0.798 - - - - - 0.798 oxidative stress induced growth inhibitor 1 [Source:MGI Symbol;Acc:MGI:1919089]
92. Gm11260 ENSMUSG00000082351 1 0.798 - - - - - 0.798 predicted gene 11260 [Source:MGI Symbol;Acc:MGI:3651928]
93. Bmp5 ENSMUSG00000032179 12 0.798 - - - - - 0.798 bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
94. Ryr3 ENSMUSG00000057378 13 0.798 - - - - - 0.798 ryanodine receptor 3 [Source:MGI Symbol;Acc:MGI:99684]
95. Krt17 ENSMUSG00000035557 15 0.798 - - - - - 0.798 keratin 17 [Source:MGI Symbol;Acc:MGI:96691]
96. Acsm3 ENSMUSG00000030935 8 0.798 - - - - - 0.798 acyl-CoA synthetase medium-chain family member 3 [Source:MGI Symbol;Acc:MGI:99538]
97. Etnppl ENSMUSG00000019232 3 0.798 - - - - - 0.798 ethanolamine phosphate phospholyase [Source:MGI Symbol;Acc:MGI:1919010]
98. Rps12-ps3 ENSMUSG00000067038 9 0.798 - - - - - 0.798 ribosomal protein S12, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3704503]
99. Gm16298 ENSMUSG00000089807 1 0.798 - - - - - 0.798 predicted gene 16298 [Source:MGI Symbol;Acc:MGI:3826538]
100. Gm10712 Gm10712 12 0.798 - - - - - 0.798

There are 65 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA