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Results for Shox2

Gene Name Gene ID Reads Annotation
Shox2 ENSMUSG00000027833 200 short stature homeobox 2 [Source:MGI Symbol;Acc:MGI:1201673]







Genes with expression patterns similar to Shox2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Shox2 ENSMUSG00000027833 200 6 1.000 1.000 1.000 1.000 1.000 1.000 short stature homeobox 2 [Source:MGI Symbol;Acc:MGI:1201673]
2. Rgs4 ENSMUSG00000038530 539 3.958 0.785 - 0.778 0.878 0.751 0.766 regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
3. Ppp1r1c ENSMUSG00000034683 286 3.321 0.849 - - 0.890 0.779 0.803 protein phosphatase 1, regulatory inhibitor subunit 1C [Source:MGI Symbol;Acc:MGI:1923185]
4. Thsd7b ENSMUSG00000042581 91 3.133 - - 0.845 0.763 0.791 0.734 thrombospondin, type I, domain containing 7B [Source:MGI Symbol;Acc:MGI:2443925]
5. Ppp1r17 ENSMUSG00000002930 374 2.429 - - - 0.834 0.805 0.790 protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
6. Neurod1 ENSMUSG00000034701 1390 2.428 - - - 0.793 0.811 0.824 neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
7. RP24-312G4.2 RP24-312G4.2 350 2.327 - - 0.847 0.761 - 0.719
8. Hmx1 ENSMUSG00000067438 72 2.326 0.858 - - 0.707 - 0.761 H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]
9. Ntrk1 ENSMUSG00000028072 70 2.277 - - 0.861 - 0.708 0.708 neurotrophic tyrosine kinase, receptor, type 1 [Source:MGI Symbol;Acc:MGI:97383]
10. D930028M14Rik ENSMUSG00000074274 452 2.167 - - - 0.719 0.718 0.730 RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
11. Otp ENSMUSG00000021685 170 1.591 0.826 - 0.765 - - - orthopedia homeobox [Source:MGI Symbol;Acc:MGI:99835]
12. Tlx3 ENSMUSG00000040610 161 1.582 0.713 - 0.869 - - - T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]
13. Ppp1r14a ENSMUSG00000037166 745 1.575 - - 0.778 0.797 - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
14. Sp8 ENSMUSG00000048562 219 1.555 - - - 0.746 0.809 - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
15. Bhlhe22 ENSMUSG00000025128 194 1.529 - - - 0.802 0.727 - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]
16. Elavl4 ENSMUSG00000028546 6084 1.523 - - - - 0.792 0.731 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
17. Npr2 ENSMUSG00000028469 946 1.516 - - 0.811 0.705 - - natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
18. Dbx2 ENSMUSG00000045608 77 1.498 0.748 - - - 0.750 - developing brain homeobox 2 [Source:MGI Symbol;Acc:MGI:107445]
19. Gm26638 ENSMUSG00000097563 57 1.476 0.730 - - 0.746 - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
20. Srrm3 ENSMUSG00000039860 113 1.464 - - 0.753 - 0.711 - serine/arginine repetitive matrix 3 [Source:MGI Symbol;Acc:MGI:1920309]
21. Nhlh1 ENSMUSG00000051251 2017 1.447 - - - 0.746 0.701 - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
22. Cadm1 ENSMUSG00000032076 15203 1.429 - - - 0.710 0.719 - cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
23. Sst ENSMUSG00000004366 517 0.862 - - - 0.862 - - somatostatin [Source:MGI Symbol;Acc:MGI:98326]
24. Neurog1 ENSMUSG00000048904 327 0.843 - - - - 0.843 - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
25. Spock2 ENSMUSG00000058297 1096 0.841 - - - - 0.841 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
26. Grm2 ENSMUSG00000023192 147 0.827 - - - 0.827 - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
27. Pou4f3 ENSMUSG00000024497 58 0.827 - - - - 0.827 - POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523]
28. Gbp8 ENSMUSG00000034438 31 0.819 0.819 - - - - - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]
29. Eya2 ENSMUSG00000017897 263 0.809 - - 0.809 - - - EYA transcriptional coactivator and phosphatase 2 [Source:MGI Symbol;Acc:MGI:109341]
30. Dbx1 ENSMUSG00000030507 205 0.795 0.795 - - - - - developing brain homeobox 1 [Source:MGI Symbol;Acc:MGI:94867]
31. Nefm ENSMUSG00000022054 2534 0.792 - - - - 0.792 - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
32. Gm13623 ENSMUSG00000083007 12 0.789 0.789 - - - - - predicted gene 13623 [Source:MGI Symbol;Acc:MGI:3649578]
33. Ddx43 ENSMUSG00000070291 17 0.787 0.787 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
34. Sox10 ENSMUSG00000033006 4908 0.77 - - 0.770 - - - SRY (sex determining region Y)-box 10 [Source:MGI Symbol;Acc:MGI:98358]
35. Zic4 ENSMUSG00000036972 1968 0.77 - - 0.770 - - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
36. Srrm4 ENSMUSG00000063919 190 0.768 - - 0.768 - - - serine/arginine repetitive matrix 4 [Source:MGI Symbol;Acc:MGI:1916205]
37. Cpne6 ENSMUSG00000022212 33 0.762 - - - 0.762 - - copine VI [Source:MGI Symbol;Acc:MGI:1334445]
38. Heyl ENSMUSG00000032744 993 0.76 - - 0.760 - - - hairy/enhancer-of-split related with YRPW motif-like [Source:MGI Symbol;Acc:MGI:1860511]
39. Ttll7 ENSMUSG00000036745 254 0.759 - - - - - 0.759 tubulin tyrosine ligase-like family, member 7 [Source:MGI Symbol;Acc:MGI:1918142]
40. Wnt7b ENSMUSG00000022382 367 0.756 - - - 0.756 - - wingless-type MMTV integration site family, member 7B [Source:MGI Symbol;Acc:MGI:98962]
41. Kcnmb2 ENSMUSG00000037610 111 0.755 - - - - 0.755 - potassium large conductance calcium-activated channel, subfamily M, beta member 2 [Source:MGI Symbol;Acc:MGI:1919663]
42. 9330159F19Rik ENSMUSG00000004360 464 0.748 - - - - 0.748 - RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
43. Snap25 ENSMUSG00000027273 427 0.747 - - - - 0.747 - synaptosomal-associated protein 25 [Source:MGI Symbol;Acc:MGI:98331]
44. Atl1 ENSMUSG00000021066 485 0.746 - - - 0.746 - - atlastin GTPase 1 [Source:MGI Symbol;Acc:MGI:1921241]
45. Syt13 ENSMUSG00000027220 679 0.745 - - - - 0.745 - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
46. Fam210b ENSMUSG00000027495 1150 0.745 - - 0.745 - - - family with sequence similarity 210, member B [Source:MGI Symbol;Acc:MGI:1914267]
47. Dcx ENSMUSG00000031285 1733 0.739 - - - - 0.739 - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
48. Onecut2 ENSMUSG00000045991 2334 0.739 - - - - 0.739 - one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]
49. Gm19980 Gm19980 33 0.739 - - - - 0.739 -
50. Zbtb16 ENSMUSG00000066687 43 0.738 - - 0.738 - - - zinc finger and BTB domain containing 16 [Source:MGI Symbol;Acc:MGI:103222]
51. Lamp5 ENSMUSG00000027270 112 0.737 - - 0.737 - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
52. Coro2a ENSMUSG00000028337 208 0.736 - - - 0.736 - - coronin, actin binding protein 2A [Source:MGI Symbol;Acc:MGI:1345966]
53. Thsd7a ENSMUSG00000032625 511 0.734 - - - - 0.734 - thrombospondin, type I, domain containing 7A [Source:MGI Symbol;Acc:MGI:2685683]
54. Frzb ENSMUSG00000027004 1088 0.729 - - - 0.729 - - frizzled-related protein [Source:MGI Symbol;Acc:MGI:892032]
55. Lair1 ENSMUSG00000055541 12 0.729 0.729 - - - - - leukocyte-associated Ig-like receptor 1 [Source:MGI Symbol;Acc:MGI:105492]
56. Ebf1 ENSMUSG00000057098 3112 0.729 - - - - 0.729 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
57. Skor1 ENSMUSG00000022245 61 0.728 - 0.728 - - - - SKI family transcriptional corepressor 1 [Source:MGI Symbol;Acc:MGI:2443473]
58. Nrn1 ENSMUSG00000039114 123 0.726 - - - - 0.726 - neuritin 1 [Source:MGI Symbol;Acc:MGI:1915654]
59. Tubb3 ENSMUSG00000062380 9211 0.726 - - - - 0.726 - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
60. Bhlhe23 ENSMUSG00000045493 61 0.723 - - 0.723 - - - basic helix-loop-helix family, member e23 [Source:MGI Symbol;Acc:MGI:2153710]
61. Cadps ENSMUSG00000054423 870 0.721 - - - - 0.721 - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
62. Gm14204 ENSMUSG00000086496 30 0.72 - - 0.720 - - - predicted gene 14204 [Source:MGI Symbol;Acc:MGI:3651576]
63. Sparcl1 ENSMUSG00000029309 3105 0.72 - - 0.720 - - - SPARC-like 1 [Source:MGI Symbol;Acc:MGI:108110]
64. Rpl7a-ps10 ENSMUSG00000101502 7 0.719 0.719 - - - - - ribosomal protein L7A, pseudogene 10 [Source:MGI Symbol;Acc:MGI:3647131]
65. Gm8237 ENSMUSG00000090707 9 0.719 0.719 - - - - - predicted gene 8237 [Source:MGI Symbol;Acc:MGI:3644039]
66. Acsm1 ENSMUSG00000033533 2 0.719 0.719 - - - - - acyl-CoA synthetase medium-chain family member 1 [Source:MGI Symbol;Acc:MGI:2152200]
67. Coro6 ENSMUSG00000020836 18 0.719 0.719 - - - - - coronin 6 [Source:MGI Symbol;Acc:MGI:2183448]
68. Pitx3 ENSMUSG00000025229 46 0.719 0.719 - - - - - paired-like homeodomain transcription factor 3 [Source:MGI Symbol;Acc:MGI:1100498]
69. Phkg1 ENSMUSG00000025537 65 0.719 0.719 - - - - - phosphorylase kinase gamma 1 [Source:MGI Symbol;Acc:MGI:97579]
70. Fau-ps2 ENSMUSG00000082658 1 0.719 0.719 - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), pseudogene 2 [Source:MGI Symbol;Acc:MGI:103018]
71. Calr3 ENSMUSG00000019732 16 0.719 0.719 - - - - - calreticulin 3 [Source:MGI Symbol;Acc:MGI:1920566]
72. Gm3650 ENSMUSG00000097891 1 0.719 0.719 - - - - - predicted gene 3650 [Source:MGI Symbol;Acc:MGI:3781826]
73. Fgfbp1 ENSMUSG00000048373 9 0.719 0.719 - - - - - fibroblast growth factor binding protein 1 [Source:MGI Symbol;Acc:MGI:1096350]
74. Gm10913 ENSMUSG00000078097 6 0.719 0.719 - - - - - predicted pseudogene 10913 [Source:MGI Symbol;Acc:MGI:3779121]
75. F730016J06Rik ENSMUSG00000086425 11 0.719 0.719 - - - - - RIKEN cDNA F730016J06 gene [Source:MGI Symbol;Acc:MGI:2443559]
76. Pgpep1l ENSMUSG00000030553 4 0.719 0.719 - - - - - pyroglutamyl-peptidase I-like [Source:MGI Symbol;Acc:MGI:1925694]
77. Rsg1 ENSMUSG00000073733 3 0.719 0.719 - - - - - REM2 and RAB-like small GTPase 1 [Source:MGI Symbol;Acc:MGI:1923416]
78. Gpha2 ENSMUSG00000024784, ENSMUSG00000107297 6 0.719 0.719 - - - - - glycoprotein hormone alpha 2 [Source:MGI Symbol;Acc:MGI:2156541]
79. Gm17150 ENSMUSG00000091410 1 0.719 0.719 - - - - - predicted gene 17150 [Source:MGI Symbol;Acc:MGI:4937977]
80. Mesp2 ENSMUSG00000030543 9 0.719 0.719 - - - - - mesoderm posterior 2 [Source:MGI Symbol;Acc:MGI:1096325]
81. Sprr2g ENSMUSG00000046203 2 0.719 0.719 - - - - - small proline-rich protein 2G [Source:MGI Symbol;Acc:MGI:1330348]
82. Gm26779 ENSMUSG00000097140 1 0.719 0.719 - - - - - predicted gene, 26779 [Source:MGI Symbol;Acc:MGI:5477273]
83. Snord83b ENSMUSG00000077734 3 0.719 0.719 - - - - - small nucleolar RNA, C/D box 83B [Source:MGI Symbol;Acc:MGI:3819557]
84. Cyp4b1 ENSMUSG00000028713 21 0.719 0.719 - - - - - cytochrome P450, family 4, subfamily b, polypeptide 1 [Source:MGI Symbol;Acc:MGI:103225]
85. Gm15567 ENSMUSG00000084974 3 0.719 0.719 - - - - - predicted gene 15567 [Source:MGI Symbol;Acc:MGI:3783016]
86. Gm8692 ENSMUSG00000082755 2 0.719 0.719 - - - - - predicted gene 8692 [Source:MGI Symbol;Acc:MGI:3646818]
87. Lipo2 ENSMUSG00000087303 3 0.719 0.719 - - - - - lipase, member O2 [Source:MGI Symbol;Acc:MGI:3644466]
88. Gm6408 ENSMUSG00000096344 1 0.719 0.719 - - - - - predicted gene 6408 [Source:MGI Symbol;Acc:MGI:3779591]
89. Dnaic1 ENSMUSG00000061322 31 0.719 0.719 - - - - - dynein, axonemal, intermediate chain 1 [Source:MGI Symbol;Acc:MGI:1916172]
90. Jazf1 ENSMUSG00000063568 47 0.719 0.719 - - - - - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
91. C4b ENSMUSG00000073418 2 0.719 0.719 - - - - - complement component 4B (Chido blood group) [Source:MGI Symbol;Acc:MGI:88228]
92. Gm6587 ENSMUSG00000081245 2 0.719 0.719 - - - - - predicted gene 6587 [Source:MGI Symbol;Acc:MGI:3645486]
93. C4a ENSMUSG00000015451 5 0.719 0.719 - - - - - complement component 4A (Rodgers blood group) [Source:MGI Symbol;Acc:MGI:98320]
94. Adam18 ENSMUSG00000031552 2 0.719 0.719 - - - - - a disintegrin and metallopeptidase domain 18 [Source:MGI Symbol;Acc:MGI:105986]
95. Vmn1r-ps128 ENSMUSG00000084315 7 0.719 0.719 - - - - - vomeronasal 1 receptor, pseudogene 128 [Source:MGI Symbol;Acc:MGI:3651039]
96. Mcidas ENSMUSG00000074651 8 0.719 0.719 - - - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:MGI Symbol;Acc:MGI:3648807]
97. Gm26355 ENSMUSG00000088845 5 0.719 0.719 - - - - - predicted gene, 26355 [Source:MGI Symbol;Acc:MGI:5456132]
98. Dok6 ENSMUSG00000073514 10 0.719 0.719 - - - - - docking protein 6 [Source:MGI Symbol;Acc:MGI:3639495]
99. Ms4a1 ENSMUSG00000024673 3 0.719 0.719 - - - - - membrane-spanning 4-domains, subfamily A, member 1 [Source:MGI Symbol;Acc:MGI:88321]
100. Gm6444 ENSMUSG00000080836 12 0.719 0.719 - - - - - predicted gene 6444 [Source:MGI Symbol;Acc:MGI:3648226]

There are 26 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA