Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Shmt2

Gene Name Gene ID Reads Annotation
Shmt2 ENSMUSG00000025403 11421 serine hydroxymethyltransferase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1277989]







Genes with expression patterns similar to Shmt2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Shmt2 ENSMUSG00000025403 11421 6 1.000 1.000 1.000 1.000 1.000 1.000 serine hydroxymethyltransferase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1277989]
2. Snrpb ENSMUSG00000027404 20831 1.517 - 0.759 0.758 - - - small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:98342]
3. Hdgf ENSMUSG00000004897 19641 1.458 - - 0.702 0.756 - - hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
4. Afp ENSMUSG00000054932 3253 0.873 - - - 0.873 - - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
5. Apoa2 ENSMUSG00000005681 228 0.863 - - - 0.863 - - apolipoprotein A-II [Source:MGI Symbol;Acc:MGI:88050]
6. Apoe ENSMUSG00000002985 3873 0.849 - - - 0.849 - - apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
7. Cited4 ENSMUSG00000070803 736 0.845 - - - 0.845 - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 [Source:MGI Symbol;Acc:MGI:1861694]
8. Fgb ENSMUSG00000033831 418 0.844 - - - 0.844 - - fibrinogen beta chain [Source:MGI Symbol;Acc:MGI:99501]
9. Serpina6 ENSMUSG00000060807 442 0.836 - - - 0.836 - - serine (or cysteine) peptidase inhibitor, clade A, member 6 [Source:MGI Symbol;Acc:MGI:88278]
10. Alb ENSMUSG00000029368 370 0.831 - - - 0.831 - - albumin [Source:MGI Symbol;Acc:MGI:87991]
11. Nrgn ENSMUSG00000053310 469 0.829 - - - 0.829 - - neurogranin [Source:MGI Symbol;Acc:MGI:1927184]
12. Gata1 ENSMUSG00000031162 328 0.827 - - - 0.827 - - GATA binding protein 1 [Source:MGI Symbol;Acc:MGI:95661]
13. Mt2 ENSMUSG00000031762 1817 0.825 - - - 0.825 - - metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
14. Lyve1 ENSMUSG00000030787 184 0.824 - - - 0.824 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:MGI Symbol;Acc:MGI:2136348]
15. C1qbp ENSMUSG00000018446 17499 0.818 - - - 0.818 - - complement component 1, q subcomponent binding protein [Source:MGI Symbol;Acc:MGI:1194505]
16. Glud1 ENSMUSG00000021794 6385 0.816 - - - 0.816 - - glutamate dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:95753]
17. Rbp4 ENSMUSG00000024990 1171 0.815 - - - 0.815 - - retinol binding protein 4, plasma [Source:MGI Symbol;Acc:MGI:97879]
18. Ppbp ENSMUSG00000029372 2130 0.807 - - - 0.807 - - pro-platelet basic protein [Source:MGI Symbol;Acc:MGI:1888712]
19. Itgb2 ENSMUSG00000000290 154 0.807 - - - 0.807 - - integrin beta 2 [Source:MGI Symbol;Acc:MGI:96611]
20. Ambp ENSMUSG00000028356 362 0.806 - - - 0.806 - - alpha 1 microglobulin/bikunin [Source:MGI Symbol;Acc:MGI:88002]
21. Trf ENSMUSG00000032554 359 0.8 - - - 0.800 - - transferrin [Source:MGI Symbol;Acc:MGI:98821]
22. Pf4 ENSMUSG00000029373 3019 0.797 - - - 0.797 - - platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
23. Itih2 ENSMUSG00000037254 468 0.796 - - - 0.796 - - inter-alpha trypsin inhibitor, heavy chain 2 [Source:MGI Symbol;Acc:MGI:96619]
24. Ucp2 ENSMUSG00000033685 2664 0.792 - - - 0.792 - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
25. Cxxc1 ENSMUSG00000024560 6841 0.79 - - 0.790 - - - CXXC finger 1 (PHD domain) [Source:MGI Symbol;Acc:MGI:1921572]
26. Fga ENSMUSG00000028001 637 0.79 - - - 0.790 - - fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
27. Rbm8a ENSMUSG00000038374 9615 0.788 - - 0.788 - - - RNA binding motif protein 8a [Source:MGI Symbol;Acc:MGI:1913129]
28. Mt1 ENSMUSG00000031765 1970 0.788 - - - 0.788 - - metallothionein 1 [Source:MGI Symbol;Acc:MGI:97171]
29. Serpina1a ENSMUSG00000066366 88 0.787 - - - 0.787 - - serine (or cysteine) peptidase inhibitor, clade A, member 1A [Source:MGI Symbol;Acc:MGI:891971]
30. Hbb-bs ENSMUSG00000052305 2551 0.787 - - - 0.787 - - hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
31. Serpina1b ENSMUSG00000071178 482 0.786 - - - 0.786 - - serine (or cysteine) preptidase inhibitor, clade A, member 1B [Source:MGI Symbol;Acc:MGI:891970]
32. Slc29a1 ENSMUSG00000023942 2102 0.786 - - - 0.786 - - solute carrier family 29 (nucleoside transporters), member 1 [Source:MGI Symbol;Acc:MGI:1927073]
33. Fermt3 ENSMUSG00000024965 174 0.785 - - - 0.785 - - fermitin family member 3 [Source:MGI Symbol;Acc:MGI:2147790]
34. Glrx5 ENSMUSG00000021102 5231 0.782 - - - 0.782 - - glutaredoxin 5 [Source:MGI Symbol;Acc:MGI:1920296]
35. Gstm1 ENSMUSG00000058135 3606 0.78 - - - 0.780 - - glutathione S-transferase, mu 1 [Source:MGI Symbol;Acc:MGI:95860]
36. Sord ENSMUSG00000027227 1821 0.772 - - - 0.772 - - sorbitol dehydrogenase [Source:MGI Symbol;Acc:MGI:98266]
37. Car2 ENSMUSG00000027562 1176 0.771 - - - 0.771 - - carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
38. Cpox ENSMUSG00000022742 1757 0.771 - - - 0.771 - - coproporphyrinogen oxidase [Source:MGI Symbol;Acc:MGI:104841]
39. Mpl ENSMUSG00000006389 46 0.771 - - - 0.771 - - myeloproliferative leukemia virus oncogene [Source:MGI Symbol;Acc:MGI:97076]
40. Txn2 ENSMUSG00000005354 7983 0.764 - - 0.764 - - - thioredoxin 2 [Source:MGI Symbol;Acc:MGI:1929468]
41. Got2 ENSMUSG00000031672 8823 0.76 - - - 0.760 - - glutamatic-oxaloacetic transaminase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:95792]
42. Sptb ENSMUSG00000021061 824 0.759 - - - 0.759 - - spectrin beta, erythrocytic [Source:MGI Symbol;Acc:MGI:98387]
43. Bnip3 ENSMUSG00000078566 3134 0.757 - - - 0.757 - - BCL2/adenovirus E1B interacting protein 3 [Source:MGI Symbol;Acc:MGI:109326]
44. Ssx2ip ENSMUSG00000036825 1609 0.755 - - - 0.755 - - synovial sarcoma, X 2 interacting protein [Source:MGI Symbol;Acc:MGI:2139150]
45. Bin2 ENSMUSG00000098112 317 0.754 - - - 0.754 - - bridging integrator 2 [Source:MGI Symbol;Acc:MGI:3611448]
46. Ankrd11 ENSMUSG00000035569 7854 0.751 - 0.751 - - - - ankyrin repeat domain 11 [Source:MGI Symbol;Acc:MGI:1924337]
47. Tal1 ENSMUSG00000028717 398 0.748 - - - 0.748 - - T cell acute lymphocytic leukemia 1 [Source:MGI Symbol;Acc:MGI:98480]
48. Gm15915 ENSMUSG00000085723 101 0.746 - - - 0.746 - - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
49. Srm ENSMUSG00000006442 7421 0.745 - - - 0.745 - - spermidine synthase [Source:MGI Symbol;Acc:MGI:102690]
50. Treml2 ENSMUSG00000071068, ENSMUSG00000116153 85 0.742 - - - 0.742 - - triggering receptor expressed on myeloid cells-like 2 [Source:MGI Symbol;Acc:MGI:2147038]
51. Slc35d3 ENSMUSG00000050473 84 0.742 - - - 0.742 - - solute carrier family 35, member D3 [Source:MGI Symbol;Acc:MGI:1923407]
52. Cdk2ap1 ENSMUSG00000029394 7590 0.738 - - 0.738 - - - CDK2 (cyclin-dependent kinase 2)-associated protein 1 [Source:MGI Symbol;Acc:MGI:1202069]
53. Hbb-bt ENSMUSG00000073940 12887 0.735 - - - 0.735 - - hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
54. Gpx1 ENSMUSG00000063856 7321 0.734 - - - 0.734 - - glutathione peroxidase 1 [Source:MGI Symbol;Acc:MGI:104887]
55. Serpina1d ENSMUSG00000071177 146 0.729 - - - 0.729 - - serine (or cysteine) peptidase inhibitor, clade A, member 1D [Source:MGI Symbol;Acc:MGI:891968]
56. Hprt ENSMUSG00000025630 1421 0.728 - - - 0.728 - - hypoxanthine guanine phosphoribosyl transferase [Source:MGI Symbol;Acc:MGI:96217]
57. Apoa1 ENSMUSG00000032083 306 0.728 - - - 0.728 - - apolipoprotein A-I [Source:MGI Symbol;Acc:MGI:88049]
58. Hk1 ENSMUSG00000037012 595 0.728 - - - 0.728 - - hexokinase 1 [Source:MGI Symbol;Acc:MGI:96103]
59. Csnk2a1 ENSMUSG00000074698 11115 0.725 0.725 - - - - - casein kinase 2, alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:88543]
60. Serpinf2 ENSMUSG00000038224 452 0.725 - - - 0.725 - - serine (or cysteine) peptidase inhibitor, clade F, member 2 [Source:MGI Symbol;Acc:MGI:107173]
61. Ncl ENSMUSG00000026234 29206 0.723 - - 0.723 - - - nucleolin [Source:MGI Symbol;Acc:MGI:97286]
62. Ttr ENSMUSG00000061808 1351 0.72 - - - 0.720 - - transthyretin [Source:MGI Symbol;Acc:MGI:98865]
63. F10 ENSMUSG00000031444 51 0.719 - - - 0.719 - - coagulation factor X [Source:MGI Symbol;Acc:MGI:103107]
64. Anp32b ENSMUSG00000028333 39524 0.719 - - 0.719 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
65. Ybx3 ENSMUSG00000030189 16551 0.718 - - - 0.718 - - Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]
66. Adprh ENSMUSG00000002844 25667 0.717 - - 0.717 - - - ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
67. Wdr89 ENSMUSG00000045690 12291 0.716 - 0.716 - - - - WD repeat domain 89 [Source:MGI Symbol;Acc:MGI:1919588]
68. Pcsk9 ENSMUSG00000044254 347 0.715 - - - 0.715 - - proprotein convertase subtilisin/kexin type 9 [Source:MGI Symbol;Acc:MGI:2140260]
69. Nt5dc2 ENSMUSG00000071547 14294 0.713 - - 0.713 - - - 5'-nucleotidase domain containing 2 [Source:MGI Symbol;Acc:MGI:1917271]
70. Ube2c ENSMUSG00000001403 11085 0.71 0.710 - - - - - ubiquitin-conjugating enzyme E2C [Source:MGI Symbol;Acc:MGI:1915862]
71. Hnf4a ENSMUSG00000017950 358 0.707 - - - 0.707 - - hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
72. Ewsr1 ENSMUSG00000009079 12667 0.707 - - 0.707 - - - Ewing sarcoma breakpoint region 1 [Source:MGI Symbol;Acc:MGI:99960]
73. Cited1 ENSMUSG00000051159 431 0.706 - - - 0.706 - - Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 [Source:MGI Symbol;Acc:MGI:108023]
74. Psat1 ENSMUSG00000024640 15774 0.705 - - - 0.705 - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
75. U2af2 ENSMUSG00000030435 49812 0.703 - - 0.703 - - - U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
76. Tbrg4 ENSMUSG00000000384 1278 0.703 - - - 0.703 - - transforming growth factor beta regulated gene 4 [Source:MGI Symbol;Acc:MGI:1100868]
77. Tubb5 ENSMUSG00000001525 119280 0.701 - - 0.701 - - - tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
78. Spsb4 ENSMUSG00000046997 5432 0.7 - - 0.700 - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA