Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Shfm1

Gene Name Gene ID Reads Annotation
Shfm1 8890 split hand/foot malformation (ectrodactyly) type 1







Genes with expression patterns similar to Shfm1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Shfm1 8890 6 1.000 1.000 1.000 1.000 1.000 1.000 split hand/foot malformation (ectrodactyly) type 1
2. Clns1a ENSMUSG00000025439 7794 0.803 - 0.803 - - - - chloride channel, nucleotide-sensitive, 1A [Source:MGI Symbol;Acc:MGI:109638]
3. Tcf12 ENSMUSG00000032228 16901 0.779 0.779 - - - - - transcription factor 12 [Source:MGI Symbol;Acc:MGI:101877]
4. Rab14 ENSMUSG00000026878 8334 0.777 - - - - - 0.777 RAB14, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915615]
5. Slmo2 3335 0.773 - - - - - 0.773 slowmo homolog 2 (Drosophila), transcript variant X1
6. Rps19-ps6 ENSMUSG00000096942 18035 0.768 0.768 - - - - - ribosomal protein S19, pseudogene 6 [Source:MGI Symbol;Acc:MGI:5011818]
7. Enah ENSMUSG00000022995 1908 0.765 - - - - - 0.765 ENAH actin regulator [Source:MGI Symbol;Acc:MGI:108360]
8. Psma1 ENSMUSG00000030751 10411 0.764 0.764 - - - - - proteasome (prosome, macropain) subunit, alpha type 1 [Source:MGI Symbol;Acc:MGI:1347005]
9. Mif ENSMUSG00000033307 16046 0.761 0.761 - - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:MGI Symbol;Acc:MGI:96982]
10. Nfkbib ENSMUSG00000030595 1018 0.76 - - - - - 0.760 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta [Source:MGI Symbol;Acc:MGI:104752]
11. Banf1 ENSMUSG00000024844 53597 0.755 0.755 - - - - - barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
12. Dpp8 ENSMUSG00000032393 1163 0.755 - - - - - 0.755 dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
13. Dync1i2 ENSMUSG00000027012 17607 0.754 - - - - - 0.754 dynein cytoplasmic 1 intermediate chain 2 [Source:MGI Symbol;Acc:MGI:107750]
14. C78339 C78339 2858 0.753 - - - - - 0.753
15. Snrpc ENSMUSG00000024217 5601 0.75 - - - - - 0.750 U1 small nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:109489]
16. Ndufa12 ENSMUSG00000020022 40260 0.75 0.750 - - - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
17. Isoc1 ENSMUSG00000024601 3341 0.746 - - - - - 0.746 isochorismatase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913557]
18. Evc ENSMUSG00000029122 1169 0.746 - - - - - 0.746 EvC ciliary complex subunit 1 [Source:MGI Symbol;Acc:MGI:1890596]
19. Amd1 ENSMUSG00000075232 1041 0.744 - - 0.744 - - - S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
20. Ahi1 ENSMUSG00000019986 4663 0.743 - - - - - 0.743 Abelson helper integration site 1 [Source:MGI Symbol;Acc:MGI:87971]
21. Kat6a ENSMUSG00000031540 6194 0.742 - - - - - 0.742 K(lysine) acetyltransferase 6A [Source:MGI Symbol;Acc:MGI:2442415]
22. Uchl5 ENSMUSG00000018189 3178 0.74 - - - - - 0.740 ubiquitin carboxyl-terminal esterase L5 [Source:MGI Symbol;Acc:MGI:1914848]
23. Idh1 ENSMUSG00000025950 6534 0.739 - - - - - 0.739 isocitrate dehydrogenase 1 (NADP+), soluble [Source:MGI Symbol;Acc:MGI:96413]
24. Heatr6 ENSMUSG00000000976 1640 0.737 - - - - - 0.737 HEAT repeat containing 6 [Source:MGI Symbol;Acc:MGI:1919790]
25. Ncbp2 ENSMUSG00000022774 6454 0.736 0.736 - - - - - nuclear cap binding protein subunit 2 [Source:MGI Symbol;Acc:MGI:1915342]
26. Zfp260 ENSMUSG00000049421 5404 0.734 - - - - - 0.734 zinc finger protein 260 [Source:MGI Symbol;Acc:MGI:1347071]
27. Eif2b5 ENSMUSG00000003235 2067 0.733 - - - - - 0.733 eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:MGI Symbol;Acc:MGI:2446176]
28. Gm16344 ENSMUSG00000084824 377 0.733 - - - - - 0.733 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
29. Mon2 ENSMUSG00000034602 2162 0.732 - - - - - 0.732 MON2 homolog, regulator of endosome to Golgi trafficking [Source:MGI Symbol;Acc:MGI:1914324]
30. Mfng ENSMUSG00000018169 425 0.732 - - - - - 0.732 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
31. Chuk ENSMUSG00000025199 1732 0.731 - - - - - 0.731 conserved helix-loop-helix ubiquitous kinase [Source:MGI Symbol;Acc:MGI:99484]
32. Sh3pxd2a ENSMUSG00000053617 2528 0.731 - - - - - 0.731 SH3 and PX domains 2A [Source:MGI Symbol;Acc:MGI:1298393]
33. Gm10576 ENSMUSG00000102578 235 0.731 - - - - - 0.731 predicted gene 10576 [Source:MGI Symbol;Acc:MGI:3642535]
34. Prkar2a ENSMUSG00000032601 1406 0.729 - - - - - 0.729 protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
35. Fmr1 ENSMUSG00000000838 3241 0.729 - - 0.729 - - - fragile X mental retardation 1 [Source:MGI Symbol;Acc:MGI:95564]
36. Arid3b ENSMUSG00000004661 2972 0.728 - - - - - 0.728 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
37. Ccnb2 ENSMUSG00000032218 5951 0.728 - - - - - 0.728 cyclin B2 [Source:MGI Symbol;Acc:MGI:88311]
38. Jak2 ENSMUSG00000024789 1097 0.726 - - - - - 0.726 Janus kinase 2 [Source:MGI Symbol;Acc:MGI:96629]
39. Zfp131 ENSMUSG00000094870 3397 0.726 - - - - - 0.726 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
40. Megf10 ENSMUSG00000024593 890 0.726 - - - - - 0.726 multiple EGF-like-domains 10 [Source:MGI Symbol;Acc:MGI:2685177]
41. Dync1h1 ENSMUSG00000018707 5858 0.725 - - - - - 0.725 dynein cytoplasmic 1 heavy chain 1 [Source:MGI Symbol;Acc:MGI:103147]
42. Pdxp ENSMUSG00000116165 3185 0.724 - - - - - 0.724 pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:MGI Symbol;Acc:MGI:1919282]
43. Narg2 Narg2 1692 0.724 - - - - - 0.724
44. Cluh ENSMUSG00000020741 2350 0.724 - - - - - 0.724 clustered mitochondria (cluA/CLU1) homolog [Source:MGI Symbol;Acc:MGI:1921398]
45. Zfp687 ENSMUSG00000019338 583 0.723 - - - - - 0.723 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
46. Ptx3 ENSMUSG00000027832 735 0.723 - - - - - 0.723 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
47. Aff3 ENSMUSG00000037138 2438 0.723 - - - - - 0.723 AF4/FMR2 family, member 3 [Source:MGI Symbol;Acc:MGI:106927]
48. Tma7 ENSMUSG00000091537 17398 0.722 - - - - - 0.722 translational machinery associated 7 [Source:MGI Symbol;Acc:MGI:1913417]
49. Zkscan1 ENSMUSG00000029729 2845 0.722 - - - - - 0.722 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
50. Vkorc1l1 ENSMUSG00000066735 1190 0.722 - - - - - 0.722 vitamin K epoxide reductase complex, subunit 1-like 1 [Source:MGI Symbol;Acc:MGI:1916818]
51. Chd7 ENSMUSG00000041235 7625 0.721 - - - - - 0.721 chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
52. Rpl22l1 ENSMUSG00000039221 7371 0.72 - - 0.720 - - - ribosomal protein L22 like 1 [Source:MGI Symbol;Acc:MGI:1915278]
53. Btf3l4 ENSMUSG00000028568 5418 0.719 - 0.719 - - - - basic transcription factor 3-like 4 [Source:MGI Symbol;Acc:MGI:1915312]
54. 2810408I11Rik ENSMUSG00000087213 916 0.719 - - - - - 0.719 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
55. Adh5 ENSMUSG00000028138 5434 0.719 - - - - - 0.719 alcohol dehydrogenase 5 (class III), chi polypeptide [Source:MGI Symbol;Acc:MGI:87929]
56. Ube2n ENSMUSG00000074781 5355 0.718 - - - - - 0.718 ubiquitin-conjugating enzyme E2N [Source:MGI Symbol;Acc:MGI:1934835]
57. Fgd4 ENSMUSG00000022788 6160 0.717 - - - - - 0.717 FYVE, RhoGEF and PH domain containing 4 [Source:MGI Symbol;Acc:MGI:2183747]
58. Cdk1 ENSMUSG00000019942 25071 0.716 0.716 - - - - - cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
59. RPL24 RPL24 4368 0.716 - 0.716 - - - -
60. Tstd3 ENSMUSG00000028251 1160 0.715 - - - - - 0.715 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
61. Trib1 ENSMUSG00000032501 1194 0.715 - - - - - 0.715 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]
62. Atp6v1e1 ENSMUSG00000019210 2186 0.715 - - - - - 0.715 ATPase, H+ transporting, lysosomal V1 subunit E1 [Source:MGI Symbol;Acc:MGI:894326]
63. Psmd7 ENSMUSG00000039067 6598 0.714 - - - - - 0.714 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 [Source:MGI Symbol;Acc:MGI:1351511]
64. Stk11 ENSMUSG00000003068 745 0.714 - - - - - 0.714 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
65. Prrg2 ENSMUSG00000007837 453 0.714 - - - - - 0.714 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]
66. Nufip1 ENSMUSG00000022009 2226 0.713 - - - - - 0.713 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
67. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.713 - - - - - 0.713 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
68. Nemf ENSMUSG00000020982 2930 0.713 - - - - - 0.713 nuclear export mediator factor [Source:MGI Symbol;Acc:MGI:1918305]
69. Dnajc21 ENSMUSG00000044224 1073 0.712 - - - - - 0.712 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
70. Pdhx ENSMUSG00000010914 1382 0.712 - - - - - 0.712 pyruvate dehydrogenase complex, component X [Source:MGI Symbol;Acc:MGI:1351627]
71. Plk3 ENSMUSG00000028680 442 0.712 - - - - - 0.712 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
72. Rsrc1 ENSMUSG00000034544 3375 0.712 - - - - - 0.712 arginine/serine-rich coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1914130]
73. Fcgrt ENSMUSG00000003420 484 0.71 - - - - - 0.710 Fc receptor, IgG, alpha chain transporter [Source:MGI Symbol;Acc:MGI:103017]
74. Supt4a ENSMUSG00000020485 3703 0.71 - - - - - 0.710 suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
75. Kcnh2 ENSMUSG00000038319 806 0.71 - - - - - 0.710 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
76. Rrp1 ENSMUSG00000061032 3455 0.709 - - - - - 0.709 ribosomal RNA processing 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1203500]
77. Shmt1 ENSMUSG00000020534 2147 0.709 - - - - - 0.709 serine hydroxymethyltransferase 1 (soluble) [Source:MGI Symbol;Acc:MGI:98299]
78. Map6 ENSMUSG00000055407 476 0.709 - - - - - 0.709 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
79. Rabgap1 ENSMUSG00000035437 4628 0.709 - - - - - 0.709 RAB GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:2385139]
80. C1qbp ENSMUSG00000018446 17499 0.709 - 0.709 - - - - complement component 1, q subcomponent binding protein [Source:MGI Symbol;Acc:MGI:1194505]
81. Mrps21 ENSMUSG00000054312 4873 0.709 - - - - - 0.709 mitochondrial ribosomal protein S21 [Source:MGI Symbol;Acc:MGI:1913542]
82. Kcnmb4 ENSMUSG00000054934 1522 0.709 - - - - - 0.709 potassium large conductance calcium-activated channel, subfamily M, beta member 4 [Source:MGI Symbol;Acc:MGI:1913272]
83. Bcl7b ENSMUSG00000029681 996 0.709 - - - - - 0.709 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
84. Cdc25c ENSMUSG00000044201 1273 0.708 - - - - - 0.708 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
85. Rars ENSMUSG00000018848 4531 0.708 - - - - - 0.708 arginyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1914297]
86. Dkk3 ENSMUSG00000030772 426 0.708 - - - - - 0.708 dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
87. Gm15966 ENSMUSG00000085865 150 0.707 - - - - - 0.707 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
88. Nkd1 ENSMUSG00000031661 3775 0.707 - - - - - 0.707 naked cuticle 1 [Source:MGI Symbol;Acc:MGI:2135954]
89. Chek1 ENSMUSG00000032113 2429 0.707 - - - - - 0.707 checkpoint kinase 1 [Source:MGI Symbol;Acc:MGI:1202065]
90. Tm9sf2 ENSMUSG00000025544 3060 0.707 - - - - - 0.707 transmembrane 9 superfamily member 2 [Source:MGI Symbol;Acc:MGI:1915309]
91. Wwp2 ENSMUSG00000031930 1374 0.707 - - - - - 0.707 WW domain containing E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:1914144]
92. Snhg11 ENSMUSG00000044349 1353 0.706 - - - - - 0.706 small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
93. Racgap1 ENSMUSG00000023015 5133 0.706 - - - - - 0.706 Rac GTPase-activating protein 1 [Source:MGI Symbol;Acc:MGI:1349423]
94. Atp6v0c ENSMUSG00000024121 107 0.705 - - - - - 0.705 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
95. Tmub1 ENSMUSG00000028958 444 0.705 - - - - - 0.705 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
96. Zfp41 ENSMUSG00000047003 3975 0.705 - 0.705 - - - - zinc finger protein 41 [Source:MGI Symbol;Acc:MGI:99186]
97. Myo9b ENSMUSG00000004677 902 0.705 - - - - - 0.705 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
98. Fam160a2 ENSMUSG00000044465 874 0.705 - - - - - 0.705 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
99. 4632415L05Rik ENSMUSG00000048106 222 0.705 - - - - - 0.705 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
100. Coq10a ENSMUSG00000039914 324 0.705 - - - - - 0.705 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA