Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Shb

Gene Name Gene ID Reads Annotation
Shb ENSMUSG00000044813 322 src homology 2 domain-containing transforming protein B [Source:MGI Symbol;Acc:MGI:98294]







Genes with expression patterns similar to Shb

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Shb ENSMUSG00000044813 322 6 1.000 1.000 1.000 1.000 1.000 1.000 src homology 2 domain-containing transforming protein B [Source:MGI Symbol;Acc:MGI:98294]
2. Gatc ENSMUSG00000029536 892 1.518 - - 0.701 - 0.817 - glutamyl-tRNA(Gln) amidotransferase, subunit C [Source:MGI Symbol;Acc:MGI:1923776]
3. Zswim7 ENSMUSG00000014243 799 0.973 - - - - 0.973 - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
4. Rps12l2 Rps12l2 94 0.973 - - - - 0.973 -
5. Zfp125 ENSMUSG00000069755 218 0.971 - - - - 0.971 - zinc finger protein 125 [Source:MGI Symbol;Acc:MGI:1336211]
6. Ankrd13c ENSMUSG00000039988 429 0.971 - - - - 0.971 - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
7. Gm11792 ENSMUSG00000083137 57 0.97 - - - - 0.970 - predicted gene 11792 [Source:MGI Symbol;Acc:MGI:3652127]
8. Tchh ENSMUSG00000052415 60 0.97 - - - - 0.970 - trichohyalin [Source:MGI Symbol;Acc:MGI:2177944]
9. Mrap ENSMUSG00000039956 92 0.97 - - - - 0.970 - melanocortin 2 receptor accessory protein [Source:MGI Symbol;Acc:MGI:1924287]
10. Cldn1 ENSMUSG00000022512 77 0.969 - - - - 0.969 - claudin 1 [Source:MGI Symbol;Acc:MGI:1276109]
11. Gm13132 ENSMUSG00000081276 68 0.969 - - - - 0.969 - predicted gene 13132 [Source:MGI Symbol;Acc:MGI:3651366]
12. Gm20605 ENSMUSG00000029720 375 0.969 - - - - 0.969 - predicted gene 20605 [Source:MGI Symbol;Acc:MGI:5306917]
13. Sphk1 ENSMUSG00000061878 72 0.967 - - - - 0.967 - sphingosine kinase 1 [Source:MGI Symbol;Acc:MGI:1316649]
14. C130036L24Rik ENSMUSG00000073627 155 0.967 - - - - 0.967 - RIKEN cDNA C130036L24 gene [Source:MGI Symbol;Acc:MGI:2441877]
15. 1600002H07Rik 740 0.965 - - - - 0.965 - RIKEN cDNA 1600002H07 gene, transcript variant X2
16. Gm16551 ENSMUSG00000066477 147 0.964 - - - - 0.964 - predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
17. Sez6 ENSMUSG00000000632 145 0.964 - - - - 0.964 - seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]
18. Adcy7 ENSMUSG00000031659 202 0.963 - - - - 0.963 - adenylate cyclase 7 [Source:MGI Symbol;Acc:MGI:102891]
19. Sorbs3 ENSMUSG00000022091 397 0.961 - - - - 0.961 - sorbin and SH3 domain containing 3 [Source:MGI Symbol;Acc:MGI:700013]
20. Myo16 ENSMUSG00000039057 160 0.96 - - - - 0.960 - myosin XVI [Source:MGI Symbol;Acc:MGI:2685951]
21. Wdr19 ENSMUSG00000037890 402 0.96 - - - - 0.960 - WD repeat domain 19 [Source:MGI Symbol;Acc:MGI:2443231]
22. E130309D02Rik ENSMUSG00000039244 390 0.959 - - - - 0.959 - RIKEN cDNA E130309D02 gene [Source:MGI Symbol;Acc:MGI:2442621]
23. Sik2 ENSMUSG00000037112 1369 0.959 - - - - 0.959 - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
24. Rab39b ENSMUSG00000031202 360 0.959 - - - - 0.959 - RAB39B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915040]
25. Ticrr ENSMUSG00000046591 631 0.958 - - - - 0.958 - TOPBP1-interacting checkpoint and replication regulator [Source:MGI Symbol;Acc:MGI:1924261]
26. Hps3 ENSMUSG00000027615 596 0.958 - - - - 0.958 - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
27. Ing5 ENSMUSG00000026283 657 0.957 - - - - 0.957 - inhibitor of growth family, member 5 [Source:MGI Symbol;Acc:MGI:1922816]
28. Zfp414 ENSMUSG00000073423 326 0.957 - - - - 0.957 - zinc finger protein 414 [Source:MGI Symbol;Acc:MGI:1915641]
29. Pinx1 ENSMUSG00000021958 1439 0.957 - - - - 0.957 - PIN2/TERF1 interacting, telomerase inhibitor 1 [Source:MGI Symbol;Acc:MGI:1919650]
30. Barhl2 ENSMUSG00000034384 99 0.956 - - - - 0.956 - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
31. Gm12191 ENSMUSG00000083061 359 0.956 - - - - 0.956 - predicted gene 12191 [Source:MGI Symbol;Acc:MGI:3651293]
32. Gm6136 ENSMUSG00000084106 261 0.955 - - - - 0.955 - predicted pseudogene 6136 [Source:MGI Symbol;Acc:MGI:3646897]
33. Grik5 ENSMUSG00000003378 363 0.955 - - - - 0.955 - glutamate receptor, ionotropic, kainate 5 (gamma 2) [Source:MGI Symbol;Acc:MGI:95818]
34. Dhtkd1 ENSMUSG00000025815 258 0.955 - - - - 0.955 - dehydrogenase E1 and transketolase domain containing 1 [Source:MGI Symbol;Acc:MGI:2445096]
35. Trim45 ENSMUSG00000033233 404 0.954 - - - - 0.954 - tripartite motif-containing 45 [Source:MGI Symbol;Acc:MGI:1918187]
36. Wnt3 ENSMUSG00000000125 142 0.954 - - - - 0.954 - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
37. Tmem163 ENSMUSG00000026347 282 0.953 - - - - 0.953 - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
38. 4931414P19Rik ENSMUSG00000022179 746 0.952 - - - - 0.952 - RIKEN cDNA 4931414P19 gene [Source:MGI Symbol;Acc:MGI:1921609]
39. Amacr ENSMUSG00000022244 358 0.952 - - - - 0.952 - alpha-methylacyl-CoA racemase [Source:MGI Symbol;Acc:MGI:1098273]
40. Gtf2h4 ENSMUSG00000001524 502 0.952 - - - - 0.952 - general transcription factor II H, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1338799]
41. Gareml 193 0.951 - - - - 0.951 - GRB2 associated, regulator of MAPK1-like
42. Mkrn3 ENSMUSG00000070527 269 0.951 - - - - 0.951 - makorin, ring finger protein, 3 [Source:MGI Symbol;Acc:MGI:2181178]
43. Ypel3 ENSMUSG00000042675 3138 0.95 - - - - 0.950 - yippee like 3 [Source:MGI Symbol;Acc:MGI:1913340]
44. Maz ENSMUSG00000030678 250 0.949 - - - - 0.949 - MYC-associated zinc finger protein (purine-binding transcription factor) [Source:MGI Symbol;Acc:MGI:1338823]
45. Arl6 ENSMUSG00000022722 609 0.949 - - - - 0.949 - ADP-ribosylation factor-like 6 [Source:MGI Symbol;Acc:MGI:1927136]
46. Fam73a 1247 0.948 - - - - 0.948 - family with sequence similarity 73, member A, transcript variant X2
47. 3110043O21Rik 488 0.947 - - - - 0.947 - RIKEN cDNA 3110043O21 gene, transcript variant X2
48. Gm16287 ENSMUSG00000073739 273 0.947 - - - - 0.947 - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
49. Adamtsl1 ENSMUSG00000066113 393 0.946 - - - - 0.946 - ADAMTS-like 1 [Source:MGI Symbol;Acc:MGI:1924989]
50. Rbm38 ENSMUSG00000027510 566 0.945 - - - - 0.945 - RNA binding motif protein 38 [Source:MGI Symbol;Acc:MGI:1889294]
51. Gm26764 ENSMUSG00000097667 599 0.945 - - - - 0.945 - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
52. Pard6b ENSMUSG00000044641 535 0.943 - - - - 0.943 - par-6 family cell polarity regulator beta [Source:MGI Symbol;Acc:MGI:2135605]
53. Lss ENSMUSG00000033105 1532 0.943 - - - - 0.943 - lanosterol synthase [Source:MGI Symbol;Acc:MGI:1336155]
54. Tceal3 ENSMUSG00000044550 742 0.942 - - - - 0.942 - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
55. Stk19 ENSMUSG00000061207 621 0.941 - - - - 0.941 - serine/threonine kinase 19 [Source:MGI Symbol;Acc:MGI:1860085]
56. Aifm2 ENSMUSG00000020085 140 0.94 - - - - 0.940 - apoptosis-inducing factor, mitochondrion-associated 2 [Source:MGI Symbol;Acc:MGI:1918611]
57. Klhdc4 ENSMUSG00000040263 710 0.94 - - - - 0.940 - kelch domain containing 4 [Source:MGI Symbol;Acc:MGI:2384569]
58. Parm1 ENSMUSG00000034981 1247 0.939 - - - - 0.939 - prostate androgen-regulated mucin-like protein 1 [Source:MGI Symbol;Acc:MGI:2443349]
59. 2310035C23Rik 513 0.939 - - - - 0.939 - RIKEN cDNA 2310035C23 gene, transcript variant X14
60. Lrp2 ENSMUSG00000027070 303 0.937 - - - - 0.937 - low density lipoprotein receptor-related protein 2 [Source:MGI Symbol;Acc:MGI:95794]
61. Pabpn1 ENSMUSG00000022194 1359 0.937 - - - - 0.937 - poly(A) binding protein, nuclear 1 [Source:MGI Symbol;Acc:MGI:1859158]
62. Cdh15 ENSMUSG00000031962 318 0.937 - - - - 0.937 - cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
63. Ift81 ENSMUSG00000029469 806 0.937 - - - - 0.937 - intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]
64. Trak1 ENSMUSG00000032536 705 0.936 - - - - 0.936 - trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
65. Tmem63b ENSMUSG00000036026 357 0.936 - - - - 0.936 - transmembrane protein 63b [Source:MGI Symbol;Acc:MGI:2387609]
66. Lin37 ENSMUSG00000036845 280 0.936 - - - - 0.936 - lin-37 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1922910]
67. Msx2 ENSMUSG00000021469 389 0.935 - - - - 0.935 - msh homeobox 2 [Source:MGI Symbol;Acc:MGI:97169]
68. Tmem204 ENSMUSG00000024168 307 0.934 - - - - 0.934 - transmembrane protein 204 [Source:MGI Symbol;Acc:MGI:3039635]
69. Ptgr2 ENSMUSG00000072946 410 0.934 - - - - 0.934 - prostaglandin reductase 2 [Source:MGI Symbol;Acc:MGI:1916372]
70. Gm5863 ENSMUSG00000082927 407 0.933 - - - - 0.933 - predicted gene 5863 [Source:MGI Symbol;Acc:MGI:3648580]
71. Gm11961 ENSMUSG00000056288 300 0.933 - - - - 0.933 - predicted gene 11961 [Source:MGI Symbol;Acc:MGI:3652303]
72. Fam76a ENSMUSG00000028878 1028 0.933 - - - - 0.933 - family with sequence similarity 76, member A [Source:MGI Symbol;Acc:MGI:2385211]
73. Xrcc3 ENSMUSG00000021287 302 0.932 - - - - 0.932 - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:MGI Symbol;Acc:MGI:1921585]
74. 1110034G24Rik 289 0.931 - - - - 0.931 - RIKEN cDNA 1110034G24 gene, transcript variant X6
75. Enthd2 271 0.931 - - - - 0.931 - ENTH domain containing 2, transcript variant X3
76. Zfp454 ENSMUSG00000048728 541 0.931 - - - - 0.931 - zinc finger protein 454 [Source:MGI Symbol;Acc:MGI:2679253]
77. 1110032F04Rik ENSMUSG00000046999 184 0.93 - - - - 0.930 - RIKEN cDNA 1110032F04 gene [Source:MGI Symbol;Acc:MGI:1915975]
78. Nkain1 ENSMUSG00000078532 323 0.93 - - - - 0.930 - Na+/K+ transporting ATPase interacting 1 [Source:MGI Symbol;Acc:MGI:1914399]
79. Gm5776 ENSMUSG00000099647 589 0.929 - - - - 0.929 - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
80. Sass6 ENSMUSG00000027959 1229 0.929 - - - - 0.929 - SAS-6 centriolar assembly protein [Source:MGI Symbol;Acc:MGI:1920026]
81. Xkr6 ENSMUSG00000035067 533 0.927 - - - - 0.927 - X-linked Kx blood group related 6 [Source:MGI Symbol;Acc:MGI:2447765]
82. Hap1 ENSMUSG00000006930 613 0.925 - - - - 0.925 - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
83. Abcb8 ENSMUSG00000028973 649 0.924 - - - - 0.924 - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:MGI Symbol;Acc:MGI:1351667]
84. Lrrc4b ENSMUSG00000047085 349 0.922 - - - - 0.922 - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
85. Deaf1 ENSMUSG00000058886 910 0.922 - - - - 0.922 - DEAF1, transcription factor [Source:MGI Symbol;Acc:MGI:1858496]
86. Gm13186 ENSMUSG00000081278 857 0.922 - - - - 0.922 - predicted gene 13186 [Source:MGI Symbol;Acc:MGI:3649441]
87. Tmem241 ENSMUSG00000049411 173 0.921 - - - - 0.921 - transmembrane protein 241 [Source:MGI Symbol;Acc:MGI:2442435]
88. Alg8 ENSMUSG00000035704 1502 0.921 - - - - 0.921 - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
89. Tnrc18 ENSMUSG00000039477 1051 0.919 - - - - 0.919 - trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
90. Ubap1 ENSMUSG00000028437 2702 0.919 - - - - 0.919 - ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
91. Adamts17 ENSMUSG00000058145 169 0.919 - - - - 0.919 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17 [Source:MGI Symbol;Acc:MGI:3588195]
92. Nox4 ENSMUSG00000030562 754 0.917 - - - - 0.917 - NADPH oxidase 4 [Source:MGI Symbol;Acc:MGI:1354184]
93. Arfgap3 ENSMUSG00000054277 1293 0.917 - - - - 0.917 - ADP-ribosylation factor GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:1913501]
94. Zdhhc4 ENSMUSG00000001844 1297 0.917 - - - - 0.917 - zinc finger, DHHC domain containing 4 [Source:MGI Symbol;Acc:MGI:1920131]
95. Slc35f1 ENSMUSG00000038602 342 0.916 - - - - 0.916 - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
96. Tm2d1 ENSMUSG00000028563 1315 0.913 - - - - 0.913 - TM2 domain containing 1 [Source:MGI Symbol;Acc:MGI:2137022]
97. Gm26737 ENSMUSG00000097467 966 0.912 - - - - 0.912 - predicted gene, 26737 [Source:MGI Symbol;Acc:MGI:5477231]
98. Trim13 ENSMUSG00000035235 728 0.909 - - - - 0.909 - tripartite motif-containing 13 [Source:MGI Symbol;Acc:MGI:1913847]
99. l7Rn6 2860 0.907 - - - - 0.907 - lethal, Chr 7, Rinchik 6, transcript variant X2
100. Nudt10 ENSMUSG00000073293 707 0.906 - - - - 0.906 - nudix (nucleoside diphosphate linked moiety X)-type motif 10 [Source:MGI Symbol;Acc:MGI:2147931]

There are 372 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA