Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sh3bp4

Gene Name Gene ID Reads Annotation
Sh3bp4 ENSMUSG00000036206 1738 SH3-domain binding protein 4 [Source:MGI Symbol;Acc:MGI:2138297]







Genes with expression patterns similar to Sh3bp4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sh3bp4 ENSMUSG00000036206 1738 6 1.000 1.000 1.000 1.000 1.000 1.000 SH3-domain binding protein 4 [Source:MGI Symbol;Acc:MGI:2138297]
2. Emc8 ENSMUSG00000031819 1988 2.234 0.783 - - - 0.719 0.732 ER membrane protein complex subunit 8 [Source:MGI Symbol;Acc:MGI:1343095]
3. 1600002H07Rik 740 1.728 - - - - 0.823 0.905 RIKEN cDNA 1600002H07 gene, transcript variant X2
4. Epdr1 ENSMUSG00000002808 561 1.705 0.815 - - - - 0.890 ependymin related protein 1 (zebrafish) [Source:MGI Symbol;Acc:MGI:2145369]
5. Gm26737 ENSMUSG00000097467 966 1.676 - - - - 0.826 0.850 predicted gene, 26737 [Source:MGI Symbol;Acc:MGI:5477231]
6. 4931414P19Rik ENSMUSG00000022179 746 1.661 - - - - 0.822 0.839 RIKEN cDNA 4931414P19 gene [Source:MGI Symbol;Acc:MGI:1921609]
7. Ppp2r3c ENSMUSG00000021022 750 1.651 0.790 - - - - 0.861 protein phosphatase 2, regulatory subunit B'', gamma [Source:MGI Symbol;Acc:MGI:1930009]
8. Nox4 ENSMUSG00000030562 754 1.649 - - - - 0.770 0.879 NADPH oxidase 4 [Source:MGI Symbol;Acc:MGI:1354184]
9. Msantd4 ENSMUSG00000041124 1975 1.643 - - - - 0.780 0.863 Myb/SANT-like DNA-binding domain containing 4 with coiled-coils [Source:MGI Symbol;Acc:MGI:1925350]
10. Zswim7 ENSMUSG00000014243 799 1.603 0.773 - - - 0.830 - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
11. Dis3l ENSMUSG00000032396 662 1.603 0.819 - - - - 0.784 DIS3 like exosome 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:2143272]
12. Alg8 ENSMUSG00000035704 1502 1.591 - - - - 0.833 0.758 asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
13. Ppap2c Ppap2c 601 1.589 0.729 - - - - 0.860
14. Chd6 ENSMUSG00000057133 4383 1.586 0.793 - - - 0.793 - chromodomain helicase DNA binding protein 6 [Source:MGI Symbol;Acc:MGI:1918639]
15. Trip10 ENSMUSG00000019487 485 1.585 0.799 - - - - 0.786 thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
16. Ppp3r1 ENSMUSG00000033953 1296 1.578 - - - - 0.794 0.784 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
17. R3hcc1 ENSMUSG00000034194 1056 1.572 - - - - 0.746 0.826 R3H domain and coiled-coil containing 1 [Source:MGI Symbol;Acc:MGI:1919093]
18. Zbtb5 ENSMUSG00000049657 1113 1.57 0.808 - - - - 0.762 zinc finger and BTB domain containing 5 [Source:MGI Symbol;Acc:MGI:1924601]
19. Acp2 ENSMUSG00000002103 1293 1.557 0.825 - - - 0.732 - acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
20. Mrpl10 ENSMUSG00000001445 1186 1.529 0.785 - - - 0.744 - mitochondrial ribosomal protein L10 [Source:MGI Symbol;Acc:MGI:1333801]
21. Nup214 ENSMUSG00000001855 1695 1.524 0.707 - - - - 0.817 nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
22. Colec12 ENSMUSG00000036103 971 1.5 0.744 - - - - 0.756 collectin sub-family member 12 [Source:MGI Symbol;Acc:MGI:2152907]
23. Dusp11 ENSMUSG00000030002 1522 1.488 - - - - 0.737 0.751 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:MGI Symbol;Acc:MGI:1919352]
24. Abcf1 ENSMUSG00000038762 1943 1.465 - - - - 0.726 0.739 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:MGI Symbol;Acc:MGI:1351658]
25. Preb ENSMUSG00000045302 2019 1.453 - - 0.714 - 0.739 - prolactin regulatory element binding [Source:MGI Symbol;Acc:MGI:1355326]
26. Pank2 ENSMUSG00000037514 1182 1.444 - - - - 0.737 0.707 pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
27. Prim2 ENSMUSG00000026134 5806 1.418 0.713 - - - 0.705 - DNA primase, p58 subunit [Source:MGI Symbol;Acc:MGI:97758]
28. Mettl5 ENSMUSG00000051730 624 0.936 - - - - - 0.936 methyltransferase like 5 [Source:MGI Symbol;Acc:MGI:1922672]
29. Entpd5 ENSMUSG00000021236 515 0.93 - - - - - 0.930 ectonucleoside triphosphate diphosphohydrolase 5 [Source:MGI Symbol;Acc:MGI:1321385]
30. Dnase1l2 ENSMUSG00000024136 149 0.917 - - - - - 0.917 deoxyribonuclease 1-like 2 [Source:MGI Symbol;Acc:MGI:1913955]
31. Pard6a ENSMUSG00000005699 236 0.917 - - - - - 0.917 par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]
32. Panx2 ENSMUSG00000058441 42 0.916 - - - - - 0.916 pannexin 2 [Source:MGI Symbol;Acc:MGI:1890615]
33. 4930447F04Rik ENSMUSG00000031182 31 0.914 - - - - - 0.914 RIKEN cDNA 4930447F04 gene [Source:MGI Symbol;Acc:MGI:1922112]
34. Gm5250 ENSMUSG00000069620 31 0.914 - - - - - 0.914 predicted gene 5250 [Source:MGI Symbol;Acc:MGI:3647667]
35. 1810019D21Rik ENSMUSG00000086390 50 0.914 - - - - - 0.914 RIKEN cDNA 1810019D21 gene [Source:MGI Symbol;Acc:MGI:1917021]
36. Gm26793 ENSMUSG00000096999 40 0.914 - - - - - 0.914 predicted gene, 26793 [Source:MGI Symbol;Acc:MGI:5477287]
37. Gm2381 ENSMUSG00000092225 56 0.914 - - - - - 0.914 predicted gene 2381 [Source:MGI Symbol;Acc:MGI:3780549]
38. Gm13362 ENSMUSG00000086418 31 0.914 - - - - - 0.914 predicted gene 13362 [Source:MGI Symbol;Acc:MGI:3652150]
39. Gm13613 ENSMUSG00000086819 36 0.914 - - - - - 0.914 predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
40. Gm9083 ENSMUSG00000083033 141 0.914 - - - - - 0.914 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
41. Gm23458 ENSMUSG00000065191 51 0.914 - - - - - 0.914 predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
42. Snord15b ENSMUSG00000064966 96 0.913 - - - - - 0.913 small nucleolar RNA, C/D box 14B [Source:MGI Symbol;Acc:MGI:3779515]
43. Ascl2 ENSMUSG00000009248 66 0.913 - - - - - 0.913 achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
44. Pqlc1 ENSMUSG00000034006 467 0.912 - - - - - 0.912 PQ loop repeat containing 1 [Source:MGI Symbol;Acc:MGI:1914193]
45. A830005F24Rik ENSMUSG00000053181 54 0.912 - - - - - 0.912 RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
46. Gm12024 ENSMUSG00000081101 53 0.911 - - - - - 0.911 predicted gene 12024 [Source:MGI Symbol;Acc:MGI:3650980]
47. Insl6 ENSMUSG00000050957 119 0.91 - - - - - 0.910 insulin-like 6 [Source:MGI Symbol;Acc:MGI:1351595]
48. 1700066M21Rik ENSMUSG00000038323 217 0.91 - - - - - 0.910 RIKEN cDNA 1700066M21 gene [Source:MGI Symbol;Acc:MGI:1920717]
49. 1300002K09Rik 1300002K09Rik 75 0.91 - - - - - 0.910
50. Ppl ENSMUSG00000039457 107 0.908 - - - - - 0.908 periplakin [Source:MGI Symbol;Acc:MGI:1194898]
51. Cep63 ENSMUSG00000032534 639 0.908 - - - - - 0.908 centrosomal protein 63 [Source:MGI Symbol;Acc:MGI:2158560]
52. Csf1r ENSMUSG00000024621 344 0.907 - - - - - 0.907 colony stimulating factor 1 receptor [Source:MGI Symbol;Acc:MGI:1339758]
53. Gm15249 Gm15249 167 0.907 - - - - - 0.907
54. Parp16 ENSMUSG00000032392 195 0.906 - - - - - 0.906 poly (ADP-ribose) polymerase family, member 16 [Source:MGI Symbol;Acc:MGI:2446133]
55. Lama5 ENSMUSG00000015647 351 0.905 - - - - - 0.905 laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
56. Snta1 ENSMUSG00000027488 128 0.905 - - - - - 0.905 syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
57. Dyrk2 ENSMUSG00000028630 251 0.905 - - - - - 0.905 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:MGI Symbol;Acc:MGI:1330301]
58. Paqr8 ENSMUSG00000025931 160 0.905 - - - - - 0.905 progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
59. Pskh1 ENSMUSG00000048310 1703 0.904 - - - - - 0.904 protein serine kinase H1 [Source:MGI Symbol;Acc:MGI:3528383]
60. Qsox2 ENSMUSG00000036327 342 0.904 - - - - - 0.904 quiescin Q6 sulfhydryl oxidase 2 [Source:MGI Symbol;Acc:MGI:2387194]
61. Acsl5 ENSMUSG00000024981 381 0.902 - - - - - 0.902 acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
62. Dmrtb1 ENSMUSG00000028610 67 0.901 - - - - - 0.901 DMRT-like family B with proline-rich C-terminal, 1 [Source:MGI Symbol;Acc:MGI:1927125]
63. Cldn23 ENSMUSG00000055976 75 0.901 - - - - - 0.901 claudin 23 [Source:MGI Symbol;Acc:MGI:1919158]
64. Pex12 ENSMUSG00000018733 304 0.901 - - - - - 0.901 peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
65. Gm12122 ENSMUSG00000086311 200 0.9 - - - - - 0.900 predicted gene 12122 [Source:MGI Symbol;Acc:MGI:3650741]
66. Rpl9 ENSMUSG00000047215 1086 0.898 - - - - - 0.898 ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
67. Esco1 ENSMUSG00000024293 313 0.898 - - - - - 0.898 establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1925055]
68. Adal ENSMUSG00000027259 372 0.898 - - - - - 0.898 adenosine deaminase-like [Source:MGI Symbol;Acc:MGI:1923144]
69. Gm16433 ENSMUSG00000043024 424 0.898 - - - - - 0.898 predicted gene 16433 [Source:MGI Symbol;Acc:MGI:3645626]
70. Nphp4 ENSMUSG00000039577 216 0.897 - - - - - 0.897 nephronophthisis 4 (juvenile) homolog (human) [Source:MGI Symbol;Acc:MGI:2384210]
71. Hmox1 ENSMUSG00000005413 393 0.897 - - - - - 0.897 heme oxygenase 1 [Source:MGI Symbol;Acc:MGI:96163]
72. D130062J21Rik D130062J21Rik 693 0.897 - - - - - 0.897
73. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.897 - - - - - 0.897 predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
74. Pkib ENSMUSG00000019876 677 0.896 - - - - - 0.896 protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
75. Ophn1 ENSMUSG00000031214 1005 0.896 - - - - - 0.896 oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
76. Kremen2 ENSMUSG00000040680 164 0.896 - - - - - 0.896 kringle containing transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:1920266]
77. Cdk10 ENSMUSG00000033862 738 0.894 - - - - - 0.894 cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
78. Diap2 Diap2 297 0.894 - - - - - 0.894
79. Tfeb ENSMUSG00000023990 568 0.893 - - - - - 0.893 transcription factor EB [Source:MGI Symbol;Acc:MGI:103270]
80. Fahd2a ENSMUSG00000027371 222 0.891 - - - - - 0.891 fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
81. Slc25a33 ENSMUSG00000028982 440 0.89 - - - - - 0.890 solute carrier family 25, member 33 [Source:MGI Symbol;Acc:MGI:1917806]
82. Cdh1 ENSMUSG00000000303 383 0.89 - - - - - 0.890 cadherin 1 [Source:MGI Symbol;Acc:MGI:88354]
83. Lars ENSMUSG00000024493 2024 0.89 - - - - - 0.890 leucyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1913808]
84. C230081A13Rik C230081A13Rik 1846 0.889 - - - - - 0.889
85. 2900076A07Rik ENSMUSG00000097277 202 0.889 - - - - - 0.889 RIKEN cDNA 2900076A07 gene [Source:MGI Symbol;Acc:MGI:1920242]
86. Alyref2 ENSMUSG00000060244 351 0.888 - - - - - 0.888 Aly/REF export factor 2 [Source:MGI Symbol;Acc:MGI:1913144]
87. Pkp3 ENSMUSG00000054065 110 0.887 - - - - - 0.887 plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
88. Trmt5 ENSMUSG00000034442 564 0.887 - - - - - 0.887 TRM5 tRNA methyltransferase 5 [Source:MGI Symbol;Acc:MGI:1923607]
89. Zic2 ENSMUSG00000061524 472 0.886 - - - - - 0.886 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
90. Clec11a ENSMUSG00000004473 282 0.886 - - - - - 0.886 C-type lectin domain family 11, member a [Source:MGI Symbol;Acc:MGI:1298219]
91. Snx14 ENSMUSG00000032422 399 0.886 - - - - - 0.886 sorting nexin 14 [Source:MGI Symbol;Acc:MGI:2155664]
92. Lrif1 ENSMUSG00000056260 480 0.886 - - - - - 0.886 ligand dependent nuclear receptor interacting factor 1 [Source:MGI Symbol;Acc:MGI:2445214]
93. Slc7a11 ENSMUSG00000027737 244 0.885 - - - - - 0.885 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 [Source:MGI Symbol;Acc:MGI:1347355]
94. Slc40a1 ENSMUSG00000025993 484 0.884 - - - - - 0.884 solute carrier family 40 (iron-regulated transporter), member 1 [Source:MGI Symbol;Acc:MGI:1315204]
95. Lypd6 ENSMUSG00000050447 283 0.884 - - - - - 0.884 LY6/PLAUR domain containing 6 [Source:MGI Symbol;Acc:MGI:2443848]
96. Galnt14 ENSMUSG00000024064 186 0.883 - - - - - 0.883 polypeptide N-acetylgalactosaminyltransferase 14 [Source:MGI Symbol;Acc:MGI:1918935]
97. Gphn ENSMUSG00000047454 499 0.882 - - - - - 0.882 gephyrin [Source:MGI Symbol;Acc:MGI:109602]
98. Epha5 ENSMUSG00000029245 256 0.881 - - - - - 0.881 Eph receptor A5 [Source:MGI Symbol;Acc:MGI:99654]
99. Fam105b Fam105b 1241 0.881 - - - - - 0.881
100. Arhgap12 ENSMUSG00000041225 1893 0.879 - - - - - 0.879 Rho GTPase activating protein 12 [Source:MGI Symbol;Acc:MGI:1922665]

There are 824 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA