Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Setx

Gene Name Gene ID Reads Annotation
Setx ENSMUSG00000043535 1924 senataxin [Source:MGI Symbol;Acc:MGI:2443480]







Genes with expression patterns similar to Setx

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Setx ENSMUSG00000043535 1924 6 1.000 1.000 1.000 1.000 1.000 1.000 senataxin [Source:MGI Symbol;Acc:MGI:2443480]
2. Chic2 ENSMUSG00000029229 3175 0.934 - 0.934 - - - - cysteine-rich hydrophobic domain 2 [Source:MGI Symbol;Acc:MGI:1921527]
3. Xpo5 ENSMUSG00000067150 682 0.924 - 0.924 - - - - exportin 5 [Source:MGI Symbol;Acc:MGI:1913789]
4. Crtc1 ENSMUSG00000003575 621 0.92 - 0.920 - - - - CREB regulated transcription coactivator 1 [Source:MGI Symbol;Acc:MGI:2142523]
5. Klhl18 ENSMUSG00000054792 443 0.918 - 0.918 - - - - kelch-like 18 [Source:MGI Symbol;Acc:MGI:2143315]
6. Abhd8 ENSMUSG00000007950 711 0.915 - 0.915 - - - - abhydrolase domain containing 8 [Source:MGI Symbol;Acc:MGI:1918946]
7. Atg16l1 ENSMUSG00000026289 1129 0.915 - 0.915 - - - - autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]
8. Nat10 ENSMUSG00000027185 602 0.912 - 0.912 - - - - N-acetyltransferase 10 [Source:MGI Symbol;Acc:MGI:2138939]
9. Mfsd7b 498 0.912 - 0.912 - - - - major facilitator superfamily domain containing 7B, transcript variant X1
10. Csgalnact2 ENSMUSG00000042042 405 0.911 - 0.911 - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:MGI Symbol;Acc:MGI:1926002]
11. Stc1 ENSMUSG00000014813 363 0.91 - 0.910 - - - - stanniocalcin 1 [Source:MGI Symbol;Acc:MGI:109131]
12. Arl13b ENSMUSG00000022911 824 0.91 - 0.910 - - - - ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
13. Wdr33 ENSMUSG00000024400 1573 0.91 - 0.910 - - - - WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570]
14. Nudt2 ENSMUSG00000028443 698 0.91 - 0.910 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:MGI Symbol;Acc:MGI:1913651]
15. Fanca ENSMUSG00000032815 322 0.909 - 0.909 - - - - Fanconi anemia, complementation group A [Source:MGI Symbol;Acc:MGI:1341823]
16. Wwp1 ENSMUSG00000041058 1490 0.908 - 0.908 - - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1861728]
17. Xrcc6bp1 389 0.908 - 0.908 - - - - XRCC6 binding protein 1, transcript variant X3
18. Sox7 ENSMUSG00000063060 538 0.908 - 0.908 - - - - SRY (sex determining region Y)-box 7 [Source:MGI Symbol;Acc:MGI:98369]
19. Rnf111 ENSMUSG00000032217 1237 0.908 - 0.908 - - - - ring finger 111 [Source:MGI Symbol;Acc:MGI:1934919]
20. Asb6 ENSMUSG00000039483 591 0.905 - 0.905 - - - - ankyrin repeat and SOCS box-containing 6 [Source:MGI Symbol;Acc:MGI:1919573]
21. Polm ENSMUSG00000020474 386 0.904 - 0.904 - - - - polymerase (DNA directed), mu [Source:MGI Symbol;Acc:MGI:1860191]
22. Slc7a6 ENSMUSG00000031904 1103 0.904 - 0.904 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
23. Sfxn2 ENSMUSG00000025036 1352 0.904 - 0.904 - - - - sideroflexin 2 [Source:MGI Symbol;Acc:MGI:2137678]
24. Ttc21b ENSMUSG00000034848 584 0.903 - 0.903 - - - - tetratricopeptide repeat domain 21B [Source:MGI Symbol;Acc:MGI:1920918]
25. Efna3 ENSMUSG00000028039 535 0.902 - 0.902 - - - - ephrin A3 [Source:MGI Symbol;Acc:MGI:106644]
26. Tcf7 ENSMUSG00000000782 407 0.902 - 0.902 - - - - transcription factor 7, T cell specific [Source:MGI Symbol;Acc:MGI:98507]
27. Rpap1 ENSMUSG00000034032 775 0.901 - 0.901 - - - - RNA polymerase II associated protein 1 [Source:MGI Symbol;Acc:MGI:1916175]
28. Arhgef3 ENSMUSG00000021895 224 0.901 - 0.901 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:MGI Symbol;Acc:MGI:1918954]
29. Slco5a1 ENSMUSG00000025938 586 0.901 - 0.901 - - - - solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
30. Gm26617 ENSMUSG00000097340 62 0.9 - 0.900 - - - - predicted gene, 26617 [Source:MGI Symbol;Acc:MGI:5477111]
31. Dach2 ENSMUSG00000025592 622 0.9 - 0.900 - - - - dachshund family transcription factor 2 [Source:MGI Symbol;Acc:MGI:1890446]
32. Bnip3 ENSMUSG00000078566 3134 0.9 - 0.900 - - - - BCL2/adenovirus E1B interacting protein 3 [Source:MGI Symbol;Acc:MGI:109326]
33. Mocs1 ENSMUSG00000064120 232 0.9 - 0.900 - - - - molybdenum cofactor synthesis 1 [Source:MGI Symbol;Acc:MGI:1928904]
34. Ltf ENSMUSG00000032496 44 0.899 - 0.899 - - - - lactotransferrin [Source:MGI Symbol;Acc:MGI:96837]
35. Gm17167 ENSMUSG00000091542 371 0.899 - 0.899 - - - - predicted gene 17167 [Source:MGI Symbol;Acc:MGI:4937994]
36. Ranbp2 ENSMUSG00000003226 1312 0.898 - 0.898 - - - - RAN binding protein 2 [Source:MGI Symbol;Acc:MGI:894323]
37. Slc27a4 ENSMUSG00000059316 1108 0.898 - 0.898 - - - - solute carrier family 27 (fatty acid transporter), member 4 [Source:MGI Symbol;Acc:MGI:1347347]
38. Gabra1 ENSMUSG00000010803 177 0.898 - 0.898 - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
39. 9230110C19Rik 238 0.898 - 0.898 - - - - RIKEN cDNA 9230110C19 gene, transcript variant X2
40. 1110032A03Rik ENSMUSG00000037971 578 0.898 - 0.898 - - - - RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
41. B3gnt7 ENSMUSG00000079445 259 0.898 - 0.898 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384394]
42. Mlh3 ENSMUSG00000021245 389 0.898 - 0.898 - - - - mutL homolog 3 [Source:MGI Symbol;Acc:MGI:1353455]
43. Mfsd5 ENSMUSG00000045665 541 0.898 - 0.898 - - - - major facilitator superfamily domain containing 5 [Source:MGI Symbol;Acc:MGI:2145901]
44. Tradd ENSMUSG00000031887 165 0.898 - 0.898 - - - - TNFRSF1A-associated via death domain [Source:MGI Symbol;Acc:MGI:109200]
45. Slc29a4 ENSMUSG00000050822 399 0.897 - 0.897 - - - - solute carrier family 29 (nucleoside transporters), member 4 [Source:MGI Symbol;Acc:MGI:2385330]
46. Kcnip3 ENSMUSG00000079056 249 0.897 - 0.897 - - - - Kv channel interacting protein 3, calsenilin [Source:MGI Symbol;Acc:MGI:1929258]
47. Cdk5rap1 ENSMUSG00000027487 333 0.897 - 0.897 - - - - CDK5 regulatory subunit associated protein 1 [Source:MGI Symbol;Acc:MGI:1914221]
48. Trpc2 ENSMUSG00000100254 1435 0.897 - 0.897 - - - - transient receptor potential cation channel, subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:109527]
49. Mbnl2 ENSMUSG00000022139 3296 0.896 - 0.896 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
50. Gm26799 ENSMUSG00000097579 157 0.896 - 0.896 - - - - predicted gene, 26799 [Source:MGI Symbol;Acc:MGI:5477293]
51. Gnpnat1 ENSMUSG00000037722 795 0.896 - 0.896 - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1858963]
52. Ndufaf3 ENSMUSG00000070283 346 0.895 - 0.895 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 3 [Source:MGI Symbol;Acc:MGI:1913956]
53. Caml ENSMUSG00000021501 3056 0.895 - 0.895 - - - - calcium modulating ligand [Source:MGI Symbol;Acc:MGI:104728]
54. Vangl2 ENSMUSG00000026556 2575 0.895 - 0.895 - - - - VANGL planar cell polarity 2 [Source:MGI Symbol;Acc:MGI:2135272]
55. Eea1 ENSMUSG00000036499 1413 0.893 - 0.893 - - - - early endosome antigen 1 [Source:MGI Symbol;Acc:MGI:2442192]
56. Rnf217 ENSMUSG00000063760 460 0.893 - 0.893 - - - - ring finger protein 217 [Source:MGI Symbol;Acc:MGI:3610311]
57. Zfp654 ENSMUSG00000047141 509 0.893 - 0.893 - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
58. Snx24 ENSMUSG00000024535 873 0.892 - 0.892 - - - - sorting nexing 24 [Source:MGI Symbol;Acc:MGI:1916476]
59. Fbxl16 ENSMUSG00000025738 443 0.892 - 0.892 - - - - F-box and leucine-rich repeat protein 16 [Source:MGI Symbol;Acc:MGI:2448488]
60. Vps29 ENSMUSG00000029462 4052 0.891 - 0.891 - - - - VPS29 retromer complex component [Source:MGI Symbol;Acc:MGI:1928344]
61. Kctd9 ENSMUSG00000034327 450 0.891 - 0.891 - - - - potassium channel tetramerisation domain containing 9 [Source:MGI Symbol;Acc:MGI:2145579]
62. Dusp5 ENSMUSG00000034765 478 0.89 - 0.890 - - - - dual specificity phosphatase 5 [Source:MGI Symbol;Acc:MGI:2685183]
63. Nr2c1 ENSMUSG00000005897 852 0.889 - 0.889 - - - - nuclear receptor subfamily 2, group C, member 1 [Source:MGI Symbol;Acc:MGI:1352465]
64. Mrpl23-ps1 ENSMUSG00000075279 486 0.889 - 0.889 - - - - mitichondrial ribosomal protein L23, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3650679]
65. Ccdc137 ENSMUSG00000049957 859 0.888 - 0.888 - - - - coiled-coil domain containing 137 [Source:MGI Symbol;Acc:MGI:1914541]
66. Mrps6 ENSMUSG00000039680 1637 0.888 - 0.888 - - - - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
67. Fam118b ENSMUSG00000050471 1916 0.888 - 0.888 - - - - family with sequence similarity 118, member B [Source:MGI Symbol;Acc:MGI:1924483]
68. Kctd5 ENSMUSG00000016946 1303 0.887 - 0.887 - - - - potassium channel tetramerisation domain containing 5 [Source:MGI Symbol;Acc:MGI:1916509]
69. Xrcc5 ENSMUSG00000026187 1592 0.886 - 0.886 - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:MGI Symbol;Acc:MGI:104517]
70. Spata6 ENSMUSG00000034401 624 0.886 - 0.886 - - - - spermatogenesis associated 6 [Source:MGI Symbol;Acc:MGI:1915196]
71. Phpt1 ENSMUSG00000036504 2457 0.886 - 0.886 - - - - phosphohistidine phosphatase 1 [Source:MGI Symbol;Acc:MGI:1922704]
72. Cyp20a1 ENSMUSG00000049439 1294 0.886 - 0.886 - - - - cytochrome P450, family 20, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
73. Ppp3r1 ENSMUSG00000033953 1296 0.886 - 0.886 - - - - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
74. Fam188a 930 0.886 - 0.886 - - - - family with sequence similarity 188, member A, transcript variant X3
75. Pqlc1 ENSMUSG00000034006 467 0.885 - 0.885 - - - - PQ loop repeat containing 1 [Source:MGI Symbol;Acc:MGI:1914193]
76. Wdr12 ENSMUSG00000026019 1119 0.885 - 0.885 - - - - WD repeat domain 12 [Source:MGI Symbol;Acc:MGI:1927241]
77. St7l ENSMUSG00000045576 810 0.884 - 0.884 - - - - suppression of tumorigenicity 7-like [Source:MGI Symbol;Acc:MGI:2386964]
78. Rmi1 ENSMUSG00000035367 647 0.884 - 0.884 - - - - RecQ mediated genome instability 1 [Source:MGI Symbol;Acc:MGI:1921636]
79. 5730455P16Rik ENSMUSG00000057181 986 0.883 - 0.883 - - - - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
80. Mcph1 ENSMUSG00000039842 845 0.883 - 0.883 - - - - microcephaly, primary autosomal recessive 1 [Source:MGI Symbol;Acc:MGI:2443308]
81. Pithd1 ENSMUSG00000028669 709 0.883 - 0.883 - - - - PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913443]
82. Fam219b ENSMUSG00000032305 534 0.882 - 0.882 - - - - family with sequence similarity 219, member B [Source:MGI Symbol;Acc:MGI:1925573]
83. Leprot ENSMUSG00000035212 3389 0.881 - 0.881 - - - - leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
84. Lrp5 ENSMUSG00000024913 277 0.88 - 0.880 - - - - low density lipoprotein receptor-related protein 5 [Source:MGI Symbol;Acc:MGI:1278315]
85. Itsn2 ENSMUSG00000020640 395 0.88 - 0.880 - - - - intersectin 2 [Source:MGI Symbol;Acc:MGI:1338049]
86. Gm11223 ENSMUSG00000046341 988 0.88 - 0.880 - - - - predicted gene 11223 [Source:MGI Symbol;Acc:MGI:3651631]
87. Pygb ENSMUSG00000033059 1366 0.879 - 0.879 - - - - brain glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97828]
88. Zmym5 ENSMUSG00000040123 1253 0.879 - 0.879 - - - - zinc finger, MYM-type 5 [Source:MGI Symbol;Acc:MGI:3041170]
89. Ddx19a ENSMUSG00000015023 3351 0.878 - 0.878 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]
90. Ndufaf1 ENSMUSG00000027305 1276 0.878 - 0.878 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:MGI Symbol;Acc:MGI:1916952]
91. Cox19 ENSMUSG00000045438 1299 0.878 - 0.878 - - - - cytochrome c oxidase assembly protein 19 [Source:MGI Symbol;Acc:MGI:1915283]
92. Erh ENSMUSG00000021131 10295 0.878 - 0.878 - - - - ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
93. Mtf1 ENSMUSG00000028890 712 0.877 - 0.877 - - - - metal response element binding transcription factor 1 [Source:MGI Symbol;Acc:MGI:101786]
94. Rbm3 ENSMUSG00000031167 840 0.877 - 0.877 - - - - RNA binding motif (RNP1, RRM) protein 3 [Source:MGI Symbol;Acc:MGI:1099460]
95. 1110051M20Rik ENSMUSG00000040591 858 0.877 - 0.877 - - - - RIKEN cDNA 1110051M20 gene [Source:MGI Symbol;Acc:MGI:1915079]
96. Acss1 ENSMUSG00000027452 285 0.876 - 0.876 - - - - acyl-CoA synthetase short-chain family member 1 [Source:MGI Symbol;Acc:MGI:1915988]
97. Thumpd3 ENSMUSG00000030264 1038 0.875 - 0.875 - - - - THUMP domain containing 3 [Source:MGI Symbol;Acc:MGI:1277973]
98. Extl2 ENSMUSG00000027963 931 0.874 - 0.874 - - - - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
99. Snhg6 ENSMUSG00000098234 549 0.874 - 0.874 - - - - small nucleolar RNA host gene 6 [Source:MGI Symbol;Acc:MGI:1921074]
100. Cnot10 ENSMUSG00000056167 1313 0.874 - 0.874 - - - - CCR4-NOT transcription complex, subunit 10 [Source:MGI Symbol;Acc:MGI:1926143]

There are 305 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA