Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sep-15

Gene Name Gene ID Reads Annotation
Sep-15 Sep-15 6935











Genes with expression patterns similar to Sep-15

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. Sep-15 Sep-15 6935 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. PCNP ENSGALG00000015330 15750 1.56 - - - - - - 0.849 0.711 - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
3. TMED7 ENSGALG00000028484 21008 1.554 - - - - - - 0.751 0.803 - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
4. WDR12 ENSGALG00000008470 7654 1.547 - - - - - - 0.831 0.716 - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
5. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.506 - - - - - - 0.793 0.713 - -
6. THYN1 ENSGALG00000001529 9423 1.483 - - - - - - 0.754 0.729 - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
7. CUL4B ENSGALG00000008559 16864 1.464 - - - - - - 0.724 0.740 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
8. CLPX ENSGALG00000007289 6348 0.935 - - - - - - - 0.935 - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
9. RBM26 ENSGALG00000016910 13769 0.926 - - - - - - - 0.926 - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
10. GMPS ENSGALG00000010284 8765 0.912 - - - - - - - 0.912 - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
11. CENPE ENSGALG00000013208 12337 0.893 - - - - - - - 0.893 - - centromere protein E, transcript variant X4
12. FBXO9 ENSGALG00000016320 9600 0.893 - - - - - - 0.893 - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
13. HMGN1 ENSGALG00000016067 17375 0.891 - - - - - - 0.891 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
14. FAM193A ENSGALG00000015667 3075 0.888 - - - - - - - 0.888 - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
15. KIAA2026 ENSGALG00000015050 4659 0.886 - - - - - - - 0.886 - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
16. CCNG1 ENSGALG00000001718 9873 0.886 - - - - - - - 0.886 - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
17. SNX17 ENSGALG00000032468 13519 0.884 - - - - - - - 0.884 - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
18. GPR125 GPR125 2753 0.883 - - - - - - - 0.883 - -
19. PDCD10 ENSGALG00000009477 7061 0.882 - - - - - - 0.882 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
20. TRNT1 ENSGALG00000017368 11932 0.881 - - - - - - 0.881 - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
21. RALB ENSGALG00000026493 14590 0.88 - - - - - - 0.880 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
22. ADSS ENSGALG00000010702 7207 0.88 - - - - - - 0.880 - - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
23. NTAN1 ENSGALG00000040905 7713 0.873 - - - - - - 0.873 - - - N-terminal asparagine amidase [Source:HGNC Symbol;Acc:HGNC:29909]
24. MED28 ENSGALG00000007138 7686 0.872 - - - - - - - 0.872 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
25. YWHAQ ENSGALG00000016433 3450 0.868 - - - - - - - 0.868 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
26. DUSP7 ENSGALG00000041650 1946 0.867 - - - - - - - 0.867 - - Gallus gallus dual specificity phosphatase 7 (DUSP7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318409]
27. SLC25A39 ENSGALG00000042894 10654 0.862 - - - - - - 0.862 - - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
28. ENSGALG00000014852 ENSGALG00000014852 15288 0.861 - - - - - - 0.861 - - -
29. COMMD5 ENSGALG00000008867 12173 0.861 - - - - - - 0.861 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
30. DPP9 ENSGALG00000004200 4515 0.861 - - - - - - 0.861 - - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
31. BAIAP2 ENSGALG00000042538 1365 0.859 - - - - - - - 0.859 - - BAI1 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:947]
32. NDUFS8 ENSGALG00000040173 24745 0.858 - - - - - - 0.858 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
33. PRMT3 ENSGALG00000003958 14160 0.856 - - - - - - - 0.856 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
34. YIPF4 ENSGALG00000010547 4337 0.854 - - - - - - 0.854 - - - Yip1 domain family member 4 [Source:NCBI gene;Acc:421464]
35. RPL22 ENSGALG00000000719 74238 0.854 - - - - - - 0.854 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
36. ELOVL5 ENSGALG00000016314 18163 0.853 - - - - - - 0.853 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
37. COX11 ENSGALG00000027190 4475 0.852 - - - - - - 0.852 - - - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
38. TMCO1 ENSGALG00000033460 22822 0.851 - - - - - - 0.851 - - - transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
39. MTAP ENSGALG00000008174 10976 0.851 - - - - - - 0.851 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
40. ENSGALG00000013067 ENSGALG00000013067 10741 0.849 - - - - - - 0.849 - - -
41. CISD2 ENSGALG00000027860 12968 0.849 - - - - - - - 0.849 - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
42. RMI1 ENSGALG00000012592 3750 0.848 - - - - - - 0.848 - - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]
43. TXNDC12 ENSGALG00000010569 13822 0.847 - - - - - - 0.847 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
44. PITPNB ENSGALG00000005654 21578 0.846 - - - - - - 0.846 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
45. DEK ENSGALG00000012684 14179 0.845 - - - - - - 0.845 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
46. RER1 ENSGALG00000021683 9074 0.845 - - - - - - 0.845 - - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
47. PPAT ENSGALG00000013728 7563 0.844 - - - - - - 0.844 - - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
48. TERF1 ENSGALG00000037453 4497 0.842 - - - - - - 0.842 - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
49. COX16 ENSGALG00000020449 5959 0.841 - - - - - - 0.841 - - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
50. STRN3 ENSGALG00000040464 9045 0.841 - - - - - - 0.841 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
51. WWC3 ENSGALG00000034834 9392 0.84 - - - - - - 0.840 - - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
52. BLMH ENSGALG00000004259 36907 0.839 - - - - - - 0.839 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
53. CASP6 ENSGALG00000012186 6639 0.838 - - - - - - 0.838 - - - caspase 6 [Source:NCBI gene;Acc:395477]
54. COX20 ENSGALG00000027440 5881 0.838 - - - - - - 0.838 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
55. ZCCHC8 ENSGALG00000004486 3201 0.834 - - - - - - 0.834 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
56. ENSGALG00000000514 ENSGALG00000000514 9906 0.832 - - - - - - 0.832 - - -
57. NUMA1 ENSGALG00000001258 8406 0.831 - - - - - - 0.831 - - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
58. MLLT10 ENSGALG00000007928 4022 0.829 - - - - - - 0.829 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
59. ANAPC16 ENSGALG00000004410 18001 0.829 - - - - - - 0.829 - - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
60. DJ-1 DJ-1 13462 0.829 - - - - - - 0.829 - - -
61. C4orf46 ENSGALG00000009432 3255 0.828 - - - - - - 0.828 - - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
62. DECR1 ENSGALG00000036990 6360 0.828 - - - - - - 0.828 - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
63. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.826 - - - - - - 0.826 - - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
64. CNOT2 ENSGALG00000010042 7612 0.826 - - - - - - 0.826 - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
65. MRPS35 ENSGALG00000036730 6327 0.826 - - - - - - 0.826 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
66. PDPK1 ENSGALG00000006418 13412 0.825 - - - - - - 0.825 - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
67. MRPS9 ENSGALG00000016794 5875 0.824 - - - - - - 0.824 - - - mitochondrial ribosomal protein S9 [Source:NCBI gene;Acc:418723]
68. UQCR10 ENSGALG00000008066 52968 0.823 - - - - - - 0.823 - - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
69. TOMM22 ENSGALG00000019316 27323 0.823 - - - - - - 0.823 - - - translocase of outer mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:18002]
70. PIAS4 ENSGALG00000034413 2865 0.822 - - - - - - 0.822 - - - protein inhibitor of activated STAT 4 [Source:HGNC Symbol;Acc:HGNC:17002]
71. C1H2ORF49 ENSGALG00000016796 2976 0.822 - - - - - - 0.822 - - - chromosome 1 open reading frame, human C2orf49 [Source:NCBI gene;Acc:418725]
72. XPR1 ENSGALG00000003893 5642 0.822 - - - - - - 0.822 - - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
73. PDCD2L 4843 0.822 - - - - - - 0.822 - - - programmed cell death 2-like
74. DUT ENSGALG00000038032 34659 0.821 - - - - - - 0.821 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
75. ENSGALG00000006463 ENSGALG00000006463 45151 0.82 - - - - - - 0.820 - - -
76. FBXO28 ENSGALG00000009331 2871 0.82 - - - - - - 0.820 - - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
77. RUVBL1 ENSGALG00000005931 9379 0.82 - - - - - - - 0.820 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
78. BUD31 ENSGALG00000004705 19474 0.817 - - - - - - 0.817 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
79. LPCAT3 ENSGALG00000014570 7919 0.817 - - - - - - 0.817 - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
80. CAT ENSGALG00000030187 7534 0.817 - - - - - - 0.817 - - - catalase [Source:NCBI gene;Acc:423600]
81. POLR3F ENSGALG00000008749 5645 0.815 - - - - - - 0.815 - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
82. SERINC1 ENSGALG00000014868 12484 0.814 - - - - - - 0.814 - - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
83. DNAJC9 ENSGALG00000002701 19249 0.814 - - - - - - 0.814 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
84. PGRMC1 ENSGALG00000020260 19059 0.814 - - - - - - 0.814 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
85. DOCK7 6385 0.813 - - - - - - 0.813 - - - dedicator of cytokinesis 7, transcript variant X3
86. CHMP2B ENSGALG00000015496 3973 0.812 - - - - - - 0.812 - - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
87. SLC33A1 ENSGALG00000010302 4735 0.812 - - - - - - 0.812 - - - solute carrier family 33 member 1, transcript variant X1
88. MCM5 ENSGALG00000012546 18254 0.812 - - - - - - 0.812 - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
89. FAM136A ENSGALG00000042163 39487 0.812 - - - - - - 0.812 - - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
90. SOD1 ENSGALG00000015844 35836 0.81 - - - - - - 0.810 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
91. PDIA6 ENSGALG00000016447 51308 0.81 - - - - - - 0.810 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
92. NIPSNAP3L ENSGALG00000027334 7514 0.81 - - - - - - 0.810 - - - nipsnap homolog 3-like
93. PPIG ENSGALG00000009839 24114 0.809 - - - - - - - 0.809 - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
94. PPIH ENSGALG00000004874 25558 0.808 - - - - - - 0.808 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
95. FOXK2 ENSGALG00000001577 6346 0.808 - - - - - - 0.808 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
96. CNEP1R1 ENSGALG00000029793 6536 0.807 - - - - - - 0.807 - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
97. BRD7 ENSGALG00000003786 26858 0.807 - - - - - - 0.807 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
98. TMA16 ENSGALG00000009501 6651 0.806 - - - - - - 0.806 - - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
99. RPN2 ENSGALG00000003815 18864 0.806 - - - - - - 0.806 - - - ribophorin II [Source:NCBI gene;Acc:419177]
100. MT-ND4L MT-ND4L 12537 0.804 - - - - - - 0.804 - - -

There are 244 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA