Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sep-15

Gene Name Gene ID Reads Annotation
Sep-15 Sep-15 5644










Genes with expression patterns similar to Sep-15

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Sep-15 Sep-15 5644 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. kank1 kank1 2430 1.769 - 0.979 - - - 0.790 - - -
3. C2H1orf123 C2H1orf123 2344 1.754 0.817 - - - 0.937 - - - -
4. cenpe ENSDARG00000063385 4428 1.724 - 0.805 - - 0.919 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
5. atl3 ENSDARG00000004270 2806 1.713 - 0.801 - - 0.912 - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
6. ube2v1 ENSDARG00000041875 5739 1.708 - 0.796 - - 0.912 - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
7. psmc5 ENSDARG00000015315 8458 1.687 0.748 - - - 0.939 - - - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
8. eif5b ENSDARG00000016548 3972 1.682 - 0.806 - - 0.876 - - - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
9. pias4a ENSDARG00000007081 4264 1.666 - - - - 0.919 - 0.747 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
10. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.658 - - - - 0.921 0.737 - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
11. atp2a2a ENSDARG00000029439 940 1.651 - - - - 0.919 - 0.732 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
12. ago4 ENSDARG00000100854 496 1.638 - - - - 0.917 0.721 - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
13. dpp9 ENSDARG00000052606 2279 1.631 - - - - 0.919 0.712 - - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
14. ddx1 ENSDARG00000032117 1295 1.626 - - - - 0.908 - - 0.718 - DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
15. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.619 - - - - 0.890 - 0.729 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
16. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.612 - - - - 0.866 - 0.746 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
17. lrpprc ENSDARG00000043970 3847 1.606 - - - - 0.840 - 0.766 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
18. calm2b 3890 1.603 - 0.805 - - - - - - 0.798 calmodulin 2b, (phosphorylase kinase, delta)
19. acadvl ENSDARG00000016687 5329 1.593 - - - - 0.848 - 0.745 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
20. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.58 - 0.797 - - - - 0.783 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
21. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 1.57 - 0.809 - - - - - 0.761 - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
22. ube4b ENSDARG00000037017 8012 1.566 - - - - 0.837 - 0.729 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
23. nnt ENSDARG00000023536 7357 1.561 - - - - - 0.764 0.797 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
24. axin1 ENSDARG00000102964 1710 1.556 - 0.815 - - - 0.741 - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
25. RBM6 ENSDARG00000077060 3521 1.554 - - - - - - - 0.795 0.759 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
26. ptges3b ENSDARG00000089626 5666 1.547 0.724 - - - - - - - 0.823 prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
27. fam192a ENSDARG00000041631 4113 1.543 - 0.809 - - - 0.734 - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
28. serpinh1b ENSDARG00000019949 11693 1.539 - 0.805 - - - - 0.734 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
29. dusp1 ENSDARG00000100515 2338 1.537 - - - - - 0.756 - - 0.781 dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
30. fam133b ENSDARG00000013863 5070 1.533 - 0.809 - - - 0.724 - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
31. sf3b1 ENSDARG00000056138 5785 1.532 - 0.787 - - - - 0.745 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
32. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.531 - 0.800 - - - - 0.731 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
33. HYAL2 HYAL2 936 1.528 0.712 - - - - - 0.816 - -
34. eif3m ENSDARG00000013931 8117 1.526 0.751 - - - 0.775 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
35. ca6 ENSDARG00000056499, ENSDARG00000110050 3236 1.52 - 0.806 - - - 0.714 - - - carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]
36. fkbp3 ENSDARG00000098059 5428 1.519 - 0.728 - - - - 0.791 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
37. CYYR1 ENSDARG00000103783 4107 1.518 - 0.781 - - - - 0.737 - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
38. pbx2 ENSDARG00000019717 6892 1.517 - - - - - - 0.758 - 0.759 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
39. psat1 ENSDARG00000016733 8084 1.512 - - - - 0.732 - 0.780 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
40. cox6b2 ENSDARG00000037860 33134 1.507 - - 0.744 - - - 0.763 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
41. rbm8a ENSDARG00000016516 8789 1.503 - 0.714 - - 0.789 - - - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
42. aimp2 ENSDARG00000018903 5797 1.489 - 0.785 - - - - 0.704 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2652]
43. calr ENSDARG00000076290 13987 1.488 - - - - - 0.720 - 0.768 - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
44. napa napa 4444 1.485 - - - - - - 0.719 - 0.766
45. rps8a ENSDARG00000055996 2785 1.483 - - - - - - 0.778 0.705 - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
46. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.477 - - - - - 0.747 0.730 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
47. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.453 - - - - - 0.706 0.747 - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
48. PYURF ENSDARG00000045773 4576 1.441 - - - - - - 0.735 - 0.706 PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
49. pxn_1 pxn_1 3991 1.439 - - 0.707 - - - 0.732 - -
50. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.439 0.715 0.724 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
51. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.437 0.718 - - - - - 0.719 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
52. C9H2orf15 C9H2orf15 1975 1.413 0.706 - - - - - 0.707 - -
53. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.412 0.708 - - - - 0.704 - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
54. bri3bp ENSDARG00000010108 6295 0.969 - 0.969 - - - - - - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
55. spcs2 ENSDARG00000042823 10032 0.941 - - - - 0.941 - - - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
56. psmb6 ENSDARG00000002240 8015 0.939 - - - - 0.939 - - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
57. capn2b ENSDARG00000055592 5431 0.937 - - - - 0.937 - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
58. rhogc ENSDARG00000028401 2671 0.936 - - - - 0.936 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
59. csnk1g2a ENSDARG00000005458 2917 0.932 - - - - 0.932 - - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
60. dvl3a ENSDARG00000015707 1132 0.932 - - - - 0.932 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
61. MANBAL ENSDARG00000059853 636 0.932 - - - - 0.932 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
62. nckap1 ENSDARG00000060853 3540 0.931 - - - - 0.931 - - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
63. tmem50a ENSDARG00000015757 3244 0.93 - - - - 0.930 - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
64. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 0.93 - - - - 0.930 - - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
65. FP245444.1 FP245444.1 1922 0.929 - - - - 0.929 - - - -
66. htatip htatip 1553 0.929 - - - - 0.929 - - - -
67. casc5 1487 0.928 - - - - 0.928 - - - - cancer susceptibility candidate 5, transcript variant X3
68. hey2 ENSDARG00000013441 540 0.927 - - - - 0.927 - - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
69. rab10 ENSDARG00000046106 15618 0.927 - - - - 0.927 - - - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
70. naa15a ENSDARG00000003213 5889 0.927 - - - - 0.927 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
71. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 0.927 - - - - 0.927 - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
72. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.927 - - - - 0.927 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
73. smn1 ENSDARG00000018494 1024 0.927 - - - - 0.927 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
74. palm3 ENSDARG00000071215 1776 0.926 - - - - 0.926 - - - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
75. apc ENSDARG00000058868 2605 0.926 - - - - 0.926 - - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
76. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.926 - - - - 0.926 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
77. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.925 - - - - 0.925 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
78. usp36 ENSDARG00000032327 1884 0.925 - - - - 0.925 - - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
79. lima1 lima1 4760 0.924 - - - - 0.924 - - - -
80. UBE2QL1 ENSDARG00000079276 3474 0.924 - - - - 0.924 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
81. sin3b ENSDARG00000062472 2025 0.924 - - - - 0.924 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
82. wdr24 ENSDARG00000025507 505 0.924 - - - - 0.924 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
83. BX005008.2 BX005008.2 708 0.924 - - - - 0.924 - - - -
84. rfc1 ENSDARG00000054799 1416 0.923 - - - - 0.923 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
85. vbp1 ENSDARG00000030241 10619 0.923 - - - - 0.923 - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
86. med13b ENSDARG00000003910 1143 0.922 - - - - 0.922 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
87. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 0.922 - - - - 0.922 - - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
88. med14 ENSDARG00000009953 1383 0.922 - - - - 0.922 - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
89. cnep1r1 ENSDARG00000036064 1440 0.922 - - - - 0.922 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
90. ypel5 ENSDARG00000088929 1011 0.921 - - - - 0.921 - - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
91. h1fx ENSDARG00000054058 4075 0.921 - - - - 0.921 - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
92. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.921 - - - - 0.921 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
93. smurf1 ENSDARG00000016086 878 0.92 - - - - 0.920 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
94. gorab ENSDARG00000042031 483 0.92 - - - - 0.920 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
95. usp16 ENSDARG00000060633 684 0.92 - - - - 0.920 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
96. dnajc15 ENSDARG00000038309 1274 0.92 - - - - 0.920 - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
97. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 0.92 - - - - 0.920 - - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
98. fut8 fut8 652 0.92 - - - - 0.920 - - - -
99. smo ENSDARG00000002952 6411 0.92 - - - - 0.920 - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
100. msxe msxe 362 0.92 - - - - 0.920 - - - -

There are 867 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA