Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-12

Gene Name Gene ID Reads Annotation
Sep-12 Sep-12 1828










Genes with expression patterns similar to Sep-12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Sep-12 Sep-12 1828 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. timeless ENSDARG00000078497 1114 1.886 - - - - - - 0.968 - 0.918 timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
3. PFKL_1 PFKL_1 298 1.879 - - - - - - 0.974 - 0.905
4. nf2b ENSDARG00000025567 1441 1.863 - - - - - - 0.957 - 0.906 neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
5. cyr61 ENSDARG00000023062 1213 1.863 - - - - - - 0.942 - 0.921 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
6. fam3c ENSDARG00000056152 3833 1.86 - - - - - - 0.982 - 0.878 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
7. cx35.4 ENSDARG00000042866 685 1.81 - - - - - - 0.969 - 0.841 connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
8. cap1 ENSDARG00000016350 891 1.807 - - - - - 0.838 0.969 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
9. SEC24A ENSDARG00000104375 2614 1.801 - - - - - - 0.945 - 0.856 SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
10. cbsb ENSDARG00000010946 5779 1.779 - - - - - - 0.918 - 0.861 cystathionine-beta-synthase b [Source:ZFIN;Acc:ZDB-GENE-021030-3]
11. USP15 958 1.774 - - - - - - 0.959 - 0.815 ubiquitin specific peptidase 15
12. prpf8 ENSDARG00000026180 7026 1.767 - - - 0.837 - - 0.930 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
13. trappc3 ENSDARG00000045364 1021 1.74 - - - - - 0.774 0.966 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
14. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.736 - - - - - 0.862 - - 0.874 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
15. tbc1d5 ENSDARG00000036212 2580 1.732 - - - - - - 0.907 - 0.825 TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
16. nup98 ENSDARG00000074955 3998 1.729 - - - - - 0.756 0.973 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
17. src ENSDARG00000008107 3643 1.725 - - - - - - 0.978 - 0.747 v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
18. CABZ01115256.1 CABZ01115256.1 683 1.718 - - - - - 0.751 0.967 - -
19. setbp1 ENSDARG00000093799 4499 1.689 - - - 0.745 - - 0.944 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
20. MAP4_1 MAP4_1 1153 1.68 - - - - - 0.776 - - 0.904
21. mmp2 ENSDARG00000017676 2347 1.679 0.774 - - - - - - - 0.905 matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
22. PRODH_1 PRODH_1 3400 1.677 - - - - - 0.785 - - 0.892
23. b2ml ENSDARG00000015887 1060 1.676 - - - - - 0.710 0.966 - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
24. si:ch211-129c21.1 ENSDARG00000024775 371 1.67 - - - - - 0.753 - - 0.917 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
25. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.665 - - 0.718 - - - 0.947 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
26. si:ch211-214j24.10 ENSDARG00000045847 5145 1.657 - - - - - 0.749 - - 0.908 si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
27. cdca7a ENSDARG00000077620 9345 1.657 - - - 0.717 - - 0.940 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
28. BACH1 BACH1 1021 1.655 - - - - - 0.763 - - 0.892
29. odz4 odz4 822 1.642 - - - 0.745 - - - - 0.897
30. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.628 - 0.706 - - - - 0.922 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
31. dlx4b ENSDARG00000071560 446 1.627 0.719 - - - - - - - 0.908 distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
32. imp4 ENSDARG00000054540 1396 1.625 - 0.720 - - - - - - 0.905 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
33. paf1 ENSDARG00000098432 1806 1.623 - - - - - 0.775 - - 0.848 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
34. atp6v1d ENSDARG00000011175 8331 1.622 - - - - - 0.792 0.830 - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
35. CR387996.1 ENSDARG00000097774 3037 1.616 - - - - - 0.768 - - 0.848
36. rhoaa ENSDARG00000026845 6900 1.616 - - 0.736 - - - 0.880 - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
37. C1H4orf27 C1H4orf27 1961 1.615 - 0.817 0.798 - - - - - -
38. C5H9orf78 C5H9orf78 1550 1.612 - - - - - 0.725 - - 0.887
39. lmbrd1 ENSDARG00000104223 924 1.604 - - - - - 0.719 - - 0.885 LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
40. u2af2a ENSDARG00000012505 2920 1.586 - 0.823 - - - - - - 0.763 U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
41. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.564 - - - - - 0.712 0.852 - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
42. GUSB ENSDARG00000063126 2712 1.541 - - - - - 0.727 - - 0.814 glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
43. eif4a3 ENSDARG00000102978 16162 1.53 - - - - - 0.798 0.732 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
44. smarcc1a ENSDARG00000017397 2957 1.526 - - - - - 0.770 - - 0.756 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
45. dnmt3 dnmt3 1912 1.522 - - - 0.807 - 0.715 - - -
46. PPP1R8 PPP1R8 1897 1.52 - 0.735 - - - 0.785 - - -
47. BX294110.1 ENSDARG00000096875 1761 1.519 - 0.793 - - - 0.726 - - -
48. rpa1 ENSDARG00000003938 4403 1.507 - - 0.708 - - - 0.799 - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
49. ZNF618 ENSDARG00000071469 2347 1.506 - - - 0.723 - - - - 0.783 zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
50. wdr5 ENSDARG00000016903 4834 1.501 - - 0.711 - - - 0.790 - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
51. C8H1orf106 C8H1orf106 2690 1.497 - - 0.746 0.751 - - - - -
52. armc1l ENSDARG00000020887 1219 1.478 - - 0.709 - - 0.769 - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
53. C21H5orf15 C21H5orf15 2318 1.477 0.707 - - - - - - - 0.770
54. brdt ENSDARG00000102802 1067 1.461 - 0.727 - - - 0.734 - - - bromodomain, testis-specific [Source:ZFIN;Acc:ZDB-GENE-030131-5928]
55. egfra ENSDARG00000013847 2912 1.456 - - - - - - - 0.718 0.738 epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
56. SNRPG ENSDARG00000099667 18697 1.452 - 0.715 - 0.737 - - - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
57. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.451 - 0.702 - 0.749 - - - - - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
58. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.447 - - - 0.742 - 0.705 - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
59. med24 ENSDARG00000099431 893 1.441 - 0.715 0.726 - - - - - - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
60. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.44 - - 0.716 0.724 - - - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
61. ENDOD1_5 ENDOD1_5 8723 1.429 - - 0.704 0.725 - - - - -
62. RNF144B ENSDARG00000024940 1559 0.989 - - - - - - 0.989 - - ring finger protein 144B [Source:ZFIN;Acc:ZDB-GENE-040426-1292]
63. hddc3 ENSDARG00000020473 2814 0.988 - - - - - - 0.988 - - HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
64. junbb ENSDARG00000104773 2536 0.987 - - - - - - 0.987 - - JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
65. CHST5 CHST5 1293 0.985 - - - - - - 0.985 - -
66. mbpb ENSDARG00000089413 3334 0.984 - - - - - - 0.984 - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
67. klf6a ENSDARG00000029072 3758 0.984 - - - - - - 0.984 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
68. lrba ENSDARG00000031108 2136 0.982 - - - - - - 0.982 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
69. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 0.982 - - - - - - 0.982 - - integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
70. MFAP4_6 MFAP4_6 162 0.981 - - - - - - 0.981 - -
71. lin7c ENSDARG00000027322 3083 0.981 - - - - - - 0.981 - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
72. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 0.981 - - - - - - 0.981 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
73. hs6st2 ENSDARG00000012025 1145 0.98 - - - - - - 0.980 - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]
74. ripk1l ENSDARG00000006677 593 0.98 - - - - - - 0.980 - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
75. alpi.1 ENSDARG00000015273 1712 0.98 - - - - - - 0.980 - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
76. sppl3 ENSDARG00000025220 1892 0.979 - - - - - - 0.979 - - signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
77. sord ENSDARG00000053405 2406 0.979 - - - - - - 0.979 - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
78. arid1aa ENSDARG00000101710 3644 0.979 - - - - - - 0.979 - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
79. ptger1a ENSDARG00000078605 312 0.979 - - - - - - 0.979 - - prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]
80. ppp2ca ENSDARG00000030224 2760 0.978 - - - - - - 0.978 - - protein phosphatase 2, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-050417-441]
81. sh3bgrl3 ENSDARG00000098075 3071 0.978 - - - - - - 0.978 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
82. pcyt2 ENSDARG00000043003 3506 0.978 - - - - - - 0.978 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
83. clica clica 6206 0.978 - - - - - - 0.978 - -
84. sp8a ENSDARG00000011870 1075 0.977 - - - - - - 0.977 - - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
85. xpo1b ENSDARG00000063229 2529 0.977 - - - - - - 0.977 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
86. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.977 - - - - - - 0.977 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
87. dpp9 ENSDARG00000052606 2279 0.976 - - - - - - 0.976 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
88. myo9b ENSDARG00000077410 1956 0.976 - - - - - - 0.976 - - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
89. znf451 ENSDARG00000076939 508 0.976 - - - - - - 0.976 - - zinc finger protein 451 [Source:ZFIN;Acc:ZDB-GENE-081107-14]
90. acsbg2 ENSDARG00000004094 2445 0.976 - - - - - - 0.976 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
91. LRP10 ENSDARG00000054539 1895 0.976 - - - - - - 0.976 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
92. lect2l ENSDARG00000033227 482 0.976 - - - - - - 0.976 - - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
93. aida ENSDARG00000014532 1751 0.976 - - - - - - 0.976 - - axin interactor, dorsalization associated [Source:ZFIN;Acc:ZDB-GENE-071126-2]
94. phax ENSDARG00000044298 2302 0.976 - - - - - - 0.976 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
95. crb3b ENSDARG00000068182 683 0.975 - - - - - - 0.975 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
96. gadd45gip1 ENSDARG00000039338 1878 0.975 - - - - - - 0.975 - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
97. ppapdc1b ppapdc1b 2866 0.975 - - - - - - 0.975 - -
98. znf296 ENSDARG00000077897 658 0.975 - - - - - - 0.975 - - zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
99. arrb2b ENSDARG00000011545 3126 0.975 - - - - - - 0.975 - - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
100. CDCA4 ENSDARG00000042319 7918 0.975 - - - - - - 0.975 - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]

There are 1139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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