Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-09

Gene Name Gene ID Reads Annotation
Sep-09 Sep-09 4723











Genes with expression patterns similar to Sep-09

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. Sep-09 Sep-09 4723 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. MTDH ENSGALG00000034050 9525 1.57 - - - - - - 0.796 0.774 - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
3. CPOX ENSGALG00000015240 5292 1.569 - - - - - - 0.795 0.774 - - coproporphyrinogen oxidase
4. MPRIP ENSGALG00000004798 6700 1.527 - - - - - - 0.754 0.773 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
5. FAM207A ENSGALG00000007513 8748 1.481 - - - - - - 0.751 0.730 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
6. SRSF5 ENSGALG00000009421 8502 1.477 - - - - - - 0.745 0.732 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
7. RPE ENSGALG00000002847 7644 1.465 - - - - - - 0.736 0.729 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
8. DNPEP ENSGALG00000011318 10623 1.463 - - - - - - 0.738 0.725 - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
9. EGFLAM ENSGALG00000003726 4588 1.461 - - - - - - - 0.736 - 0.725 EGF like, fibronectin type III and laminin G domains, transcript variant X1
10. NAA16 ENSGALG00000032808 3366 1.46 - - - - - - 0.751 - - 0.709 N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
11. P4HA2 ENSGALG00000006677 5510 1.437 - - - - - - - 0.712 - 0.725 prolyl 4-hydroxylase subunit alpha 2 [Source:NCBI gene;Acc:416326]
12. RCHY1 ENSGALG00000023335 12947 0.854 - - - - - - 0.854 - - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
13. AMD1 ENSGALG00000039575 8900 0.852 - - - - - - 0.852 - - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
14. TFDP2 ENSGALG00000025759 13407 0.844 - - - - - - - 0.844 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
15. SBNO1 ENSGALG00000003392 6731 0.83 - - - - - - 0.830 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
16. ZFR ENSGALG00000003235 8466 0.823 - - - - - - 0.823 - - - zinc finger RNA binding protein, transcript variant X3
17. SRSF6 ENSGALG00000000990 12424 0.815 - - - - - - 0.815 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
18. HMGB1 ENSGALG00000042875 83509 0.815 - - 0.815 - - - - - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
19. COPS2 ENSGALG00000000404 8980 0.814 - - - - - - 0.814 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
20. RRP9 ENSGALG00000043359 9747 0.81 - - - - - - 0.810 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
21. KIAA2026 ENSGALG00000015050 4659 0.809 - - - - - - 0.809 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
22. PDHA1 ENSGALG00000016430 7070 0.804 - - - - - - 0.804 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
23. MED4 ENSGALG00000016995 3309 0.804 - - - - - - 0.804 - - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
24. APITD1 APITD1 11830 0.803 - - - - - - - 0.803 - -
25. NXN 20202 0.802 - - - - - - 0.802 - - - nucleoredoxin, transcript variant X1
26. ARPC1A ENSGALG00000004693 11583 0.8 - - - - - - 0.800 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
27. LPAR1 ENSGALG00000015729 3874 0.798 - - - - - - 0.798 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
28. ETV4 ENSGALG00000036678 2424 0.798 - - - - - - 0.798 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
29. CDC73 ENSGALG00000002469 4586 0.797 - - - - - - 0.797 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
30. RNF219 ENSGALG00000016911 4458 0.797 - - - - - - 0.797 - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
31. MPPED1 ENSGALG00000014186 5726 0.795 - - - - - - - 0.795 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
32. SUV39H2 ENSGALG00000013920 4360 0.795 - - - - - - 0.795 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
33. ENSGALG00000001398 ENSGALG00000001398 3248 0.794 - - - - - - - 0.794 - -
34. TFB2M ENSGALG00000010651 4374 0.793 - - - - - - - 0.793 - - transcription factor B2, mitochondrial
35. STK3 ENSGALG00000032850 6339 0.792 - - - - - - - 0.792 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
36. EMC7 ENSGALG00000009637 4969 0.792 - - - - - - 0.792 - - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
37. XPO1 ENSGALG00000029476 9526 0.791 - - - - - - 0.791 - - - exportin 1 [Source:NCBI gene;Acc:421192]
38. NUMB ENSGALG00000009300 4220 0.791 - - - - - - 0.791 - - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
39. PARN ENSGALG00000003091 6363 0.79 - - - - - - 0.790 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
40. ARPC4 ENSGALG00000006691 33311 0.788 - - - - - - - 0.788 - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
41. BASP1 ENSGALG00000012952 19549 0.787 - - - - - - 0.787 - - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
42. GNL3 ENSGALG00000001613 10911 0.787 - - - - - - 0.787 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
43. UCK2 ENSGALG00000003510 2512 0.786 - - - - - - 0.786 - - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
44. PUM1 ENSGALG00000042598 9392 0.786 - - - - - - 0.786 - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
45. PALLD ENSGALG00000009650 10803 0.785 - - - - - - 0.785 - - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
46. TOMM20 ENSGALG00000035299 23431 0.784 - - - - - - 0.784 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
47. SSRP1 ENSGALG00000007520 18849 0.783 - - - - - - - 0.783 - - structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]
48. C5H15ORF29 C5H15ORF29 3709 0.783 - - - - - - 0.783 - - -
49. WDR92 ENSGALG00000008760 3934 0.782 - - - - - - 0.782 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
50. GLRX5 ENSGALG00000011079 28943 0.779 - - - - - - 0.779 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
51. CPSF6 ENSGALG00000019355 7634 0.779 - - - - - - 0.779 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
52. CHOCT-1 CHOCT-1 3422 0.778 - - - - - - 0.778 - - -
53. TTYH3 ENSGALG00000004310 7422 0.777 - - - - - - - 0.777 - - tweety family member 3 [Source:HGNC Symbol;Acc:HGNC:22222]
54. PRDX6 ENSGALG00000003053 17928 0.777 - - - - - - - 0.777 - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
55. CSK ENSGALG00000031270 11541 0.775 - - - - - - 0.775 - - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
56. LYAR ENSGALG00000015000 10756 0.774 - - - - - - 0.774 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
57. RNF11 ENSGALG00000010539 8617 0.773 - - - - - - - 0.773 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
58. RAD23B ENSGALG00000015540 10828 0.772 - - - - - - 0.772 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
59. CELF1 ENSGALG00000008097 4717 0.771 - - - - - - - 0.771 - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
60. BMI1 ENSGALG00000041267 6618 0.771 - - - - - - 0.771 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
61. CHMP5 ENSGALG00000013160 13347 0.771 - - - - - - 0.771 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
62. PUS1 ENSGALG00000002354 10153 0.771 - - - - - - - 0.771 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
63. FEN1 ENSGALG00000033781 16551 0.771 - - - - - - 0.771 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
64. E2F7 ENSGALG00000031340 3430 0.769 - - - - - - 0.769 - - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
65. WSB2 ENSGALG00000008151 13246 0.769 - - - - - - - 0.769 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
66. ADSL ENSGALG00000012034 10280 0.769 - - - - - - - 0.769 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
67. MOSPD1 ENSGALG00000006132 8503 0.769 - - - - - - 0.769 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
68. CDC42BPB ENSGALG00000011432 8220 0.768 - - - - - - - 0.768 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
69. TIMM13 ENSGALG00000028937 32013 0.768 - - - - - - - 0.768 - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
70. HISTH1 ENSGALG00000011747 16825 0.767 - - - - - - 0.767 - - - histone H1
71. CYB5R3 ENSGALG00000014122 7664 0.767 - - - - - - 0.767 - - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
72. LEPROT ENSGALG00000011047 7132 0.766 - - - - - - 0.766 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
73. UBQLN1 ENSGALG00000012585 5158 0.766 - - - - - - 0.766 - - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
74. PARL ENSGALG00000002315 15943 0.766 - - - - - - 0.766 - - - presenilin associated rhomboid like
75. TRUB1 ENSGALG00000009091 1005 0.765 - - - - - - - - - 0.765 TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
76. TMED3 ENSGALG00000008272 2838 0.764 - - - - - - - 0.764 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
77. COIL ENSGALG00000003158 7806 0.764 - - - - - - 0.764 - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
78. DYNC1H1 ENSGALG00000011330 16400 0.762 - - - - - - 0.762 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
79. TRMT10C ENSGALG00000015328 1939 0.762 - - - - - - - 0.762 - - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]
80. HAUS1 ENSGALG00000040397 6195 0.762 - - - - - - 0.762 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
81. SEC22B ENSGALG00000039704 16080 0.761 - - - - - - 0.761 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
82. CPSF2 ENSGALG00000010783 5236 0.76 - - - - - - 0.760 - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
83. WDR61 ENSGALG00000003221 11352 0.76 - - - - - - 0.760 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
84. MARK3 ENSGALG00000011505 14846 0.76 - - - - - - 0.760 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
85. BRD1 ENSGALG00000029379 6047 0.759 - - - - - - - 0.759 - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
86. TRIP12 ENSGALG00000002929 11713 0.758 - - - - - - 0.758 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
87. LONP1 ENSGALG00000040492 7133 0.758 - - - - - - 0.758 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
88. MRPS18A ENSGALG00000010296 11039 0.757 - - - - - - 0.757 - - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
89. DTYMK ENSGALG00000006305 11736 0.757 - - - - - - 0.757 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
90. NDUFS5 ENSGALG00000003625 27698 0.756 - - - - - - - 0.756 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
91. UROD ENSGALG00000010219 5810 0.755 - - - - - - - 0.755 - - uroporphyrinogen decarboxylase, transcript variant X2
92. UQCRC1 ENSGALG00000005789 23201 0.755 - - - - - - 0.755 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
93. MBD3 ENSGALG00000001101 37265 0.755 - - - - - - - - - 0.755 methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
94. ARL13B ENSGALG00000015412 2968 0.754 - - - - - - - 0.754 - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
95. LYPLA1 ENSGALG00000040421 14720 0.754 - - - - - - 0.754 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
96. PEX1 ENSGALG00000009410 902 0.754 - - - - - - - - - 0.754 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
97. FBXO21 ENSGALG00000008201 2608 0.754 - - - - - - - 0.754 - - F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
98. LMO2 ENSGALG00000029892 4773 0.754 - - - - - - 0.754 - - - LIM domain only 2 [Source:NCBI gene;Acc:374129]
99. PPP4R4 ENSGALG00000010950 19 0.753 - - - - - - - - - 0.753 protein phosphatase 4 regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:23788]
100. TULP3 ENSGALG00000013424 2064 0.753 - - - - - - - 0.753 - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]

There are 203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA