Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-07

Gene Name Gene ID Reads Annotation
Sep-07 Sep-07 2939











Genes with expression patterns similar to Sep-07

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. Sep-07 Sep-07 2939 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. POLN ENSGALG00000015692 1714 0.824 - - - - - - - - - 0.824 DNA polymerase nu [Source:HGNC Symbol;Acc:HGNC:18870]
3. EVL ENSGALG00000011209 5440 0.824 - - - - - - 0.824 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
4. FAM72A ENSGALG00000000791 17723 0.821 - - - - - - - - - 0.821 family with sequence similarity 72 member A, transcript variant X1
5. U3 U3 1604 0.82 - - - - - - - - - 0.820
6. PRTG ENSGALG00000037336 34665 0.818 - - - - - - - - - 0.818 protogenin [Source:NCBI gene;Acc:415407]
7. WDR82 ENSGALG00000025904 4783 0.807 - - - - - - - - - 0.807 WD repeat domain 82 [Source:NCBI gene;Acc:415942]
8. UFD1L 12964 0.801 - - - - - - - - - 0.801 ubiquitin fusion degradation 1 like (yeast)
9. ARID1B ENSGALG00000013683 3397 0.791 - - - - - - - - - 0.791 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
10. CCNI ENSGALG00000011457 3203 0.789 - - - - - - - - - 0.789 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
11. SPERT ENSGALG00000016981 145 0.788 - - - - - - - - - 0.788 spermatid associated [Source:NCBI gene;Acc:418848]
12. SQLE ENSGALG00000036915 4172 0.784 - - - - - - - - - 0.784 squalene epoxidase [Source:NCBI gene;Acc:420335]
13. CRNKL1 ENSGALG00000008429 7280 0.781 - - - - - - - - - 0.781 crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
14. MYO5A ENSGALG00000031987 2469 0.78 - - - - - - - - - 0.780 myosin VA [Source:NCBI gene;Acc:396237]
15. SH3BP2 ENSGALG00000015665 431 0.778 - - - - - - - - - 0.778 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
16. CHN1 ENSGALG00000009293 6415 0.774 - - - - - - 0.774 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
17. CD2AP ENSGALG00000016720 8852 0.772 - - - - - - - - - 0.772 Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
18. KLC1 ENSGALG00000011528 1621 0.766 - - - - - - - - - 0.766 kinesin light chain 1, transcript variant X6
19. DDX54 ENSGALG00000007490 8729 0.763 - - - - - - - - - 0.763 DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
20. COL18A1 ENSGALG00000038311 11934 0.763 - - - - - - - 0.763 - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
21. MCCC1 ENSGALG00000008785 1376 0.758 - - - - - - - 0.758 - - methylcrotonoyl-CoA carboxylase 1 [Source:NCBI gene;Acc:424962]
22. KIDINS220 ENSGALG00000016409 854 0.757 - - - - - - - - - 0.757 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
23. C9orf89 C9orf89 3056 0.755 - - - - - - - - - 0.755
24. ABL ABL 9532 0.754 - - - - - - 0.754 - - -
25. ANKRD46 ENSGALG00000041445 3791 0.754 - - - - - - - - - 0.754 ankyrin repeat domain 46, transcript variant X1
26. BET1L ENSGALG00000004172 5305 0.753 - - - - - - 0.753 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
27. CUL5 ENSGALG00000017165 2480 0.751 - - - - - - - - - 0.751 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
28. PPP2R5C ENSGALG00000029996 5759 0.75 - - - - - - - - - 0.750 protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
29. FYTTD1 ENSGALG00000007581 9341 0.749 - - - - - - 0.749 - - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
30. DCN ENSGALG00000011274 4166 0.749 - - - - - - - - - 0.749 decorin [Source:NCBI gene;Acc:417892]
31. AIMP1 ENSGALG00000010553 17994 0.748 - - - - - - - - - 0.748 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
32. CSRP2BP CSRP2BP 4679 0.748 - - - - - - - - - 0.748
33. MED17 ENSGALG00000017218 5821 0.747 - - - - - - 0.747 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
34. TCF25 ENSGALG00000000129 7587 0.747 - - - - - - - - - 0.747 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
35. PEF1 ENSGALG00000040519 8522 0.747 - - - - - - 0.747 - - - penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
36. BNIP3L ENSGALG00000043405 10316 0.747 - - - - - - - 0.747 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
37. CNOT11 ENSGALG00000039563 11251 0.746 - - - - - - 0.746 - - - CCR4-NOT transcription complex subunit 11
38. TFB2M ENSGALG00000010651 4374 0.746 - - - - - - 0.746 - - - transcription factor B2, mitochondrial
39. PDE3B ENSGALG00000006035 3732 0.745 - - - - - - - - - 0.745 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
40. HELLS ENSGALG00000005451 7094 0.743 - - - - - - - - - 0.743 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
41. C9orf64 ENSGALG00000012589 6097 0.742 - - - - - - - - - 0.742 chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
42. TOX2 ENSGALG00000003106 2472 0.741 - - - - - - - 0.741 - - TOX high mobility group box family member 2, transcript variant X1
43. SPATA20 ENSGALG00000006857 3506 0.74 - - - - - - - - - 0.740 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
44. PTGFRN ENSGALG00000015464 14584 0.74 - - - - - - - 0.740 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
45. EHD3 ENSGALG00000009086 14407 0.739 - - - - - - 0.739 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
46. CCDC66 ENSGALG00000005450 1262 0.739 - - - - - - - - - 0.739 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
47. BTG1L ENSGALG00000004676 2293 0.738 - - - - - - - - - 0.738 protein BTG1-like
48. HNRNPD ENSGALG00000011184 10686 0.736 - - - - - - - - - 0.736 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
49. VDAC2 ENSGALG00000005002 12592 0.735 - - - - - - 0.735 - - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
50. BTBD1 ENSGALG00000006020 14157 0.735 - - - - - - - - - 0.735 BTB domain containing 1 [Source:NCBI gene;Acc:415461]
51. EIF2B1 ENSGALG00000003259 9491 0.734 - - - - - - 0.734 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
52. PTPRE ENSGALG00000009823 250 0.734 - - - - - 0.734 - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
53. PBRM1 ENSGALG00000037455 6450 0.732 - - - - - - - 0.732 - - polybromo 1 [Source:NCBI gene;Acc:396074]
54. CCDC47 ENSGALG00000000564 6584 0.731 - - - - - - - 0.731 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
55. SKAP2 ENSGALG00000030081 13746 0.73 - - - - - - 0.730 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
56. PSPC1 ENSGALG00000017142 13036 0.73 - - - - - - 0.730 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
57. TBL1XR1 ENSGALG00000039182 16983 0.729 - - - - - - - - - 0.729 transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
58. NOC4L ENSGALG00000002272 9644 0.729 - - - - - - 0.729 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
59. ANKRD10 ENSGALG00000030125 3611 0.729 - - - - - - 0.729 - - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
60. RB1CC1 ENSGALG00000015259 4211 0.729 - - - - - - - 0.729 - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
61. RARS ENSGALG00000001850 23283 0.728 - - - - - - 0.728 - - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
62. C17H9ORF16 C17H9ORF16 7908 0.728 - - - - - - 0.728 - - -
63. APP ENSGALG00000015770 9438 0.728 - - - - - - - 0.728 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
64. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.728 - - - - - - 0.728 - - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
65. FCHSD2 ENSGALG00000017329 3190 0.727 - - - - - - - 0.727 - - FCH and double SH3 domains 2 [Source:HGNC Symbol;Acc:HGNC:29114]
66. MFSD1 ENSGALG00000009593 3116 0.727 - - - - - - - - - 0.727 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
67. TAF3 ENSGALG00000006731 15569 0.726 - - - - - - 0.726 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
68. SPTBN1 ENSGALG00000029512 18579 0.726 - - 0.726 - - - - - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
69. GLIPR2 ENSGALG00000028821 5791 0.726 - - - - - - - 0.726 - - GLI pathogenesis related 2, transcript variant X2
70. ENSGALG00000016380 ENSGALG00000016380 2784 0.726 - - - - - - 0.726 - - -
71. SEC22A ENSGALG00000011697 7981 0.725 - - - - - - 0.725 - - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
72. TBX3 ENSGALG00000036043 2888 0.724 - - - - - - 0.724 - - - T-box 3 [Source:NCBI gene;Acc:374202]
73. NEK6 ENSGALG00000001118 20333 0.724 - - - - - - 0.724 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
74. N-RAS N-RAS 5787 0.724 - - - - - - 0.724 - - -
75. POLR2K ENSGALG00000036019 8962 0.724 - - - - - - - - - 0.724 RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
76. HSP90AA1 ENSGALG00000033212 55740 0.724 - - - - - - - - - 0.724 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
77. UBR2 ENSGALG00000009906 7717 0.723 - - - - - - 0.723 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
78. FARP1 ENSGALG00000016886 13132 0.723 - - - - - - 0.723 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
79. MTDH ENSGALG00000034050 9525 0.723 - - - - - - - - - 0.723 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
80. TMED3 ENSGALG00000008272 2838 0.723 - - - - - - - 0.723 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
81. ATP6AP1 ENSGALG00000008836 4343 0.722 - - - - - - - 0.722 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
82. APAF1 ENSGALG00000011531 3102 0.72 - - - - - - 0.720 - - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
83. METTL6 ENSGALG00000040665 4467 0.719 - - - - - - 0.719 - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
84. SMNDC1 ENSGALG00000008561 14415 0.719 - - - - - - - - - 0.719 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
85. MCM2 ENSGALG00000006037 13458 0.719 - - - - - - - - - 0.719 minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
86. GM2A ENSGALG00000027534 3141 0.717 - - - - - - - 0.717 - - GM2 ganglioside activator [Source:HGNC Symbol;Acc:HGNC:4367]
87. MTCH2 ENSGALG00000036196 15097 0.716 - - - - - - 0.716 - - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
88. SAR1B ENSGALG00000038753 6493 0.716 - - - - - - 0.716 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
89. TRAPPC12 ENSGALG00000016387 2593 0.715 - - - - - - - - - 0.715 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
90. ZNHIT3 ENSGALG00000026031 8652 0.715 - - - - - - 0.715 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
91. RPF2 ENSGALG00000037087 12788 0.714 - - - - - - 0.714 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
92. RBBP4 ENSGALG00000003522 72455 0.713 - - - - - - 0.713 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
93. MPI ENSGALG00000029296 11781 0.713 - - - - - - - 0.713 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
94. SRFBP1 ENSGALG00000005316 6826 0.712 - - - - - - 0.712 - - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
95. ISCA1 ENSGALG00000012606 10342 0.712 - - - - - - - - - 0.712 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
96. USP16 ENSGALG00000015813 6803 0.712 - - - - - - 0.712 - - - ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
97. WDR43 ENSGALG00000032529 12235 0.711 - - - - - - 0.711 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
98. APIP ENSGALG00000031286 6838 0.711 - - - - - - 0.711 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
99. RERE ENSGALG00000002232 8724 0.71 - - - - - - 0.710 - - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
100. LAMB1 ENSGALG00000007905 7737 0.71 - - - - - - 0.710 - - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA